Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3283 and Ac3H11_3284 overlap by 4 nucleotides Ac3H11_3284 and Ac3H11_3285 are separated by 112 nucleotides
Ac3H11_3283 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 15,328 to 16,983
_3283
Ac3H11_3284 - Sugar transporter, at 16,980 to 18,344
_3284
Ac3H11_3285 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 18,457 to 19,545
_3285
Position (kb) 16
17
18
19 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 16.174 kb on + strand, within Ac3H11_3283 at 16.181 kb on + strand, within Ac3H11_3283 at 16.181 kb on + strand, within Ac3H11_3283 at 16.181 kb on + strand, within Ac3H11_3283 at 16.181 kb on + strand, within Ac3H11_3283 at 16.182 kb on - strand, within Ac3H11_3283 at 16.182 kb on - strand, within Ac3H11_3283 at 16.204 kb on + strand, within Ac3H11_3283 at 16.204 kb on + strand, within Ac3H11_3283 at 16.205 kb on - strand, within Ac3H11_3283 at 16.280 kb on - strand, within Ac3H11_3283 at 16.280 kb on - strand, within Ac3H11_3283 at 16.280 kb on - strand, within Ac3H11_3283 at 16.562 kb on - strand, within Ac3H11_3283 at 16.562 kb on - strand, within Ac3H11_3283 at 16.580 kb on - strand, within Ac3H11_3283 at 17.091 kb on + strand at 17.229 kb on + strand, within Ac3H11_3284 at 17.229 kb on + strand, within Ac3H11_3284 at 17.229 kb on + strand, within Ac3H11_3284 at 17.230 kb on - strand, within Ac3H11_3284 at 17.230 kb on - strand, within Ac3H11_3284 at 17.230 kb on - strand, within Ac3H11_3284 at 17.230 kb on - strand, within Ac3H11_3284 at 17.238 kb on + strand, within Ac3H11_3284 at 17.239 kb on - strand, within Ac3H11_3284 at 17.239 kb on - strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.376 kb on + strand, within Ac3H11_3284 at 17.376 kb on + strand, within Ac3H11_3284 at 17.377 kb on - strand, within Ac3H11_3284 at 17.409 kb on + strand, within Ac3H11_3284 at 17.526 kb on + strand, within Ac3H11_3284 at 17.527 kb on - strand, within Ac3H11_3284 at 17.527 kb on - strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.767 kb on - strand, within Ac3H11_3284 at 17.767 kb on - strand, within Ac3H11_3284 at 17.767 kb on - strand, within Ac3H11_3284 at 17.767 kb on - strand, within Ac3H11_3284 at 17.778 kb on + strand, within Ac3H11_3284 at 17.778 kb on + strand, within Ac3H11_3284 at 17.778 kb on + strand, within Ac3H11_3284 at 17.779 kb on - strand, within Ac3H11_3284 at 17.779 kb on - strand, within Ac3H11_3284 at 17.779 kb on - strand, within Ac3H11_3284 at 17.857 kb on + strand, within Ac3H11_3284 at 17.857 kb on + strand, within Ac3H11_3284 at 17.857 kb on + strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.898 kb on + strand, within Ac3H11_3284 at 17.898 kb on + strand, within Ac3H11_3284 at 17.898 kb on + strand, within Ac3H11_3284 at 17.899 kb on - strand, within Ac3H11_3284 at 17.943 kb on + strand, within Ac3H11_3284 at 17.943 kb on + strand, within Ac3H11_3284 at 17.944 kb on - strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.099 kb on + strand, within Ac3H11_3284 at 18.100 kb on - strand, within Ac3H11_3284 at 18.180 kb on + strand, within Ac3H11_3284 at 18.180 kb on + strand, within Ac3H11_3284 at 18.180 kb on + strand, within Ac3H11_3284 at 18.180 kb on + strand, within Ac3H11_3284 at 18.181 kb on - strand, within Ac3H11_3284 at 18.181 kb on - strand, within Ac3H11_3284 at 18.181 kb on - strand, within Ac3H11_3284 at 18.288 kb on + strand at 18.410 kb on - strand at 18.410 kb on - strand at 18.410 kb on - strand at 18.410 kb on - strand at 18.664 kb on + strand, within Ac3H11_3285 at 18.664 kb on + strand, within Ac3H11_3285 at 18.665 kb on - strand, within Ac3H11_3285 at 18.665 kb on - strand, within Ac3H11_3285 at 18.665 kb on - strand, within Ac3H11_3285 at 18.736 kb on + strand, within Ac3H11_3285 at 18.737 kb on - strand, within Ac3H11_3285 at 18.737 kb on - strand, within Ac3H11_3285 at 18.835 kb on + strand, within Ac3H11_3285 at 18.835 kb on + strand, within Ac3H11_3285 at 18.836 kb on - strand, within Ac3H11_3285 at 18.836 kb on - strand, within Ac3H11_3285
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 16,174 + Ac3H11_3283 0.51 +0.4 16,181 + Ac3H11_3283 0.52 -0.5 16,181 + Ac3H11_3283 0.52 +0.7 16,181 + Ac3H11_3283 0.52 +1.1 16,181 + Ac3H11_3283 0.52 -1.5 16,182 - Ac3H11_3283 0.52 +0.1 16,182 - Ac3H11_3283 0.52 -1.2 16,204 + Ac3H11_3283 0.53 +2.9 16,204 + Ac3H11_3283 0.53 -1.0 16,205 - Ac3H11_3283 0.53 +0.1 16,280 - Ac3H11_3283 0.57 +0.7 16,280 - Ac3H11_3283 0.57 +0.1 16,280 - Ac3H11_3283 0.57 -0.1 16,562 - Ac3H11_3283 0.75 +0.9 16,562 - Ac3H11_3283 0.75 +1.4 16,580 - Ac3H11_3283 0.76 +0.8 17,091 + -0.5 17,229 + Ac3H11_3284 0.18 +0.1 17,229 + Ac3H11_3284 0.18 +0.7 17,229 + Ac3H11_3284 0.18 -0.7 17,230 - Ac3H11_3284 0.18 +0.0 17,230 - Ac3H11_3284 0.18 -1.5 17,230 - Ac3H11_3284 0.18 -1.3 17,230 - Ac3H11_3284 0.18 +0.1 17,238 + Ac3H11_3284 0.19 +0.4 17,239 - Ac3H11_3284 0.19 +0.3 17,239 - Ac3H11_3284 0.19 -0.5 17,334 + Ac3H11_3284 0.26 -0.7 17,334 + Ac3H11_3284 0.26 +1.0 17,334 + Ac3H11_3284 0.26 +0.8 17,334 + Ac3H11_3284 0.26 -2.3 17,334 + Ac3H11_3284 0.26 +0.3 17,334 + Ac3H11_3284 0.26 +0.4 17,334 + Ac3H11_3284 0.26 -0.1 17,334 + Ac3H11_3284 0.26 -1.1 17,334 + Ac3H11_3284 0.26 -0.0 17,334 + Ac3H11_3284 0.26 -1.7 17,334 + Ac3H11_3284 0.26 -0.6 17,334 + Ac3H11_3284 0.26 +0.6 17,334 + Ac3H11_3284 0.26 -1.6 17,335 - Ac3H11_3284 0.26 +0.2 17,335 - Ac3H11_3284 0.26 +0.8 17,335 - Ac3H11_3284 0.26 +1.1 17,335 - Ac3H11_3284 0.26 -1.4 17,335 - Ac3H11_3284 0.26 +0.2 17,335 - Ac3H11_3284 0.26 -0.9 17,335 - Ac3H11_3284 0.26 -0.4 17,335 - Ac3H11_3284 0.26 -0.3 17,376 + Ac3H11_3284 0.29 +0.9 17,376 + Ac3H11_3284 0.29 -0.5 17,377 - Ac3H11_3284 0.29 -1.0 17,409 + Ac3H11_3284 0.31 -1.0 17,526 + Ac3H11_3284 0.40 -1.6 17,527 - Ac3H11_3284 0.40 +0.4 17,527 - Ac3H11_3284 0.40 +1.2 17,766 + Ac3H11_3284 0.58 +0.1 17,766 + Ac3H11_3284 0.58 +0.1 17,766 + Ac3H11_3284 0.58 +0.8 17,766 + Ac3H11_3284 0.58 -1.7 17,766 + Ac3H11_3284 0.58 -1.2 17,767 - Ac3H11_3284 0.58 +1.3 17,767 - Ac3H11_3284 0.58 +0.1 17,767 - Ac3H11_3284 0.58 -0.8 17,767 - Ac3H11_3284 0.58 +1.0 17,778 + Ac3H11_3284 0.58 -2.2 17,778 + Ac3H11_3284 0.58 -0.3 17,778 + Ac3H11_3284 0.58 -1.3 17,779 - Ac3H11_3284 0.59 +0.4 17,779 - Ac3H11_3284 0.59 -1.1 17,779 - Ac3H11_3284 0.59 +1.7 17,857 + Ac3H11_3284 0.64 +0.4 17,857 + Ac3H11_3284 0.64 -0.3 17,857 + Ac3H11_3284 0.64 -1.7 17,858 - Ac3H11_3284 0.64 -0.4 17,858 - Ac3H11_3284 0.64 +0.6 17,858 - -0.6 17,858 - Ac3H11_3284 0.64 -0.0 17,858 - Ac3H11_3284 0.64 -0.4 17,858 - Ac3H11_3284 0.64 +1.1 17,858 - Ac3H11_3284 0.64 +1.5 17,858 - Ac3H11_3284 0.64 +0.9 17,858 - Ac3H11_3284 0.64 -1.0 17,858 - Ac3H11_3284 0.64 -0.4 17,898 + Ac3H11_3284 0.67 -0.3 17,898 + Ac3H11_3284 0.67 +0.5 17,898 + Ac3H11_3284 0.67 +1.5 17,899 - Ac3H11_3284 0.67 +1.6 17,943 + Ac3H11_3284 0.71 +1.2 17,943 + Ac3H11_3284 0.71 -0.4 17,944 - Ac3H11_3284 0.71 +1.3 18,096 + Ac3H11_3284 0.82 +1.5 18,096 + Ac3H11_3284 0.82 -1.6 18,096 + Ac3H11_3284 0.82 +0.9 18,096 + Ac3H11_3284 0.82 +0.6 18,096 + Ac3H11_3284 0.82 -1.7 18,096 + Ac3H11_3284 0.82 +0.9 18,096 + Ac3H11_3284 0.82 -0.7 18,096 + Ac3H11_3284 0.82 -0.7 18,096 + Ac3H11_3284 0.82 +2.1 18,097 - Ac3H11_3284 0.82 -0.2 18,097 - Ac3H11_3284 0.82 +0.1 18,097 - Ac3H11_3284 0.82 +0.1 18,097 - Ac3H11_3284 0.82 +1.8 18,097 - Ac3H11_3284 0.82 +0.7 18,097 - Ac3H11_3284 0.82 -0.3 18,097 - Ac3H11_3284 0.82 -0.1 18,097 - Ac3H11_3284 0.82 -0.1 18,097 - Ac3H11_3284 0.82 +1.3 18,097 - Ac3H11_3284 0.82 -1.0 18,097 - Ac3H11_3284 0.82 -0.7 18,099 + Ac3H11_3284 0.82 +0.5 18,100 - Ac3H11_3284 0.82 -0.1 18,180 + Ac3H11_3284 0.88 -0.1 18,180 + Ac3H11_3284 0.88 +0.3 18,180 + Ac3H11_3284 0.88 +0.2 18,180 + Ac3H11_3284 0.88 +1.5 18,181 - Ac3H11_3284 0.88 -0.0 18,181 - Ac3H11_3284 0.88 +0.6 18,181 - Ac3H11_3284 0.88 +0.4 18,288 + +1.2 18,410 - +0.9 18,410 - -0.1 18,410 - +0.2 18,410 - -0.4 18,664 + Ac3H11_3285 0.19 +2.5 18,664 + Ac3H11_3285 0.19 +1.0 18,665 - Ac3H11_3285 0.19 -0.5 18,665 - Ac3H11_3285 0.19 +1.8 18,665 - Ac3H11_3285 0.19 +0.4 18,736 + Ac3H11_3285 0.26 -0.3 18,737 - Ac3H11_3285 0.26 -0.1 18,737 - Ac3H11_3285 0.26 +0.2 18,835 + Ac3H11_3285 0.35 +0.1 18,835 + Ac3H11_3285 0.35 +0.9 18,836 - Ac3H11_3285 0.35 +0.6 18,836 - Ac3H11_3285 0.35 -0.9
Or see this region's nucleotide sequence