Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_319 and Ac3H11_320 overlap by 4 nucleotides Ac3H11_320 and Ac3H11_321 overlap by 29 nucleotides Ac3H11_321 and Ac3H11_322 are separated by 54 nucleotides
Ac3H11_318 - Multidrug resistance transporter, Bcr/CflA family, at 142,218 to 143,462
_318
Ac3H11_319 - tRNA dimethylallyltransferase (EC 2.5.1.75), at 143,449 to 144,462
_319
Ac3H11_320 - AttE component of AttEFGH ABC transport system, at 144,459 to 145,112
_320
Ac3H11_321 - hypothetical protein, at 145,084 to 145,290
_321
Ac3H11_322 - Transcriptional regulatory protein, at 145,345 to 146,541
_322
Position (kb) 144
145
146 Strain fitness (log2 ratio) -2
-1
0
1
2 at 143.603 kb on - strand, within Ac3H11_319 at 143.698 kb on + strand, within Ac3H11_319 at 143.699 kb on - strand, within Ac3H11_319 at 143.794 kb on + strand, within Ac3H11_319 at 143.795 kb on - strand, within Ac3H11_319 at 144.040 kb on - strand, within Ac3H11_319 at 144.495 kb on + strand at 144.495 kb on + strand at 144.495 kb on + strand at 144.495 kb on + strand at 144.617 kb on + strand, within Ac3H11_320 at 144.617 kb on + strand, within Ac3H11_320 at 144.618 kb on - strand, within Ac3H11_320 at 144.830 kb on - strand, within Ac3H11_320 at 145.152 kb on - strand, within Ac3H11_321 at 145.259 kb on + strand, within Ac3H11_321 at 145.259 kb on + strand, within Ac3H11_321 at 145.260 kb on - strand, within Ac3H11_321 at 145.260 kb on - strand, within Ac3H11_321 at 145.260 kb on - strand, within Ac3H11_321 at 145.260 kb on - strand, within Ac3H11_321 at 145.295 kb on - strand at 145.295 kb on - strand at 145.295 kb on - strand at 145.295 kb on - strand at 145.295 kb on - strand at 145.363 kb on + strand at 145.363 kb on + strand at 145.363 kb on + strand at 145.364 kb on - strand at 145.600 kb on + strand, within Ac3H11_322 at 145.600 kb on + strand, within Ac3H11_322 at 145.675 kb on + strand, within Ac3H11_322 at 145.741 kb on + strand, within Ac3H11_322 at 145.741 kb on + strand, within Ac3H11_322 at 145.741 kb on + strand at 145.741 kb on + strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.742 kb on - strand, within Ac3H11_322 at 145.822 kb on + strand, within Ac3H11_322 at 145.822 kb on + strand, within Ac3H11_322 at 145.822 kb on + strand, within Ac3H11_322 at 145.940 kb on + strand, within Ac3H11_322 at 145.940 kb on + strand, within Ac3H11_322 at 145.940 kb on + strand, within Ac3H11_322 at 145.940 kb on + strand, within Ac3H11_322 at 145.941 kb on - strand, within Ac3H11_322 at 145.941 kb on - strand, within Ac3H11_322
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 143,603 - Ac3H11_319 0.15 +0.6 143,698 + Ac3H11_319 0.25 -1.5 143,699 - Ac3H11_319 0.25 -1.0 143,794 + Ac3H11_319 0.34 -1.1 143,795 - Ac3H11_319 0.34 +0.6 144,040 - Ac3H11_319 0.58 -2.0 144,495 + +0.4 144,495 + +1.8 144,495 + +1.0 144,495 + -0.5 144,617 + Ac3H11_320 0.24 -1.6 144,617 + Ac3H11_320 0.24 -0.9 144,618 - Ac3H11_320 0.24 -1.0 144,830 - Ac3H11_320 0.57 -1.0 145,152 - Ac3H11_321 0.33 -0.9 145,259 + Ac3H11_321 0.85 -0.9 145,259 + Ac3H11_321 0.85 +0.6 145,260 - Ac3H11_321 0.85 -1.0 145,260 - Ac3H11_321 0.85 -0.1 145,260 - Ac3H11_321 0.85 +0.4 145,260 - Ac3H11_321 0.85 -2.1 145,295 - +0.2 145,295 - +2.1 145,295 - -0.2 145,295 - -1.6 145,295 - +2.0 145,363 + -0.2 145,363 + -1.6 145,363 + -0.9 145,364 - +0.4 145,600 + Ac3H11_322 0.21 -0.4 145,600 + Ac3H11_322 0.21 -0.1 145,675 + Ac3H11_322 0.28 -0.0 145,741 + Ac3H11_322 0.33 -2.0 145,741 + Ac3H11_322 0.33 -0.6 145,741 + -0.4 145,741 + Ac3H11_322 0.33 -0.9 145,742 - Ac3H11_322 0.33 +1.0 145,742 - Ac3H11_322 0.33 -0.4 145,742 - Ac3H11_322 0.33 -1.3 145,742 - Ac3H11_322 0.33 +0.3 145,742 - Ac3H11_322 0.33 -1.4 145,742 - Ac3H11_322 0.33 -0.5 145,742 - Ac3H11_322 0.33 +1.0 145,742 - Ac3H11_322 0.33 -0.3 145,742 - Ac3H11_322 0.33 -1.5 145,742 - Ac3H11_322 0.33 +1.4 145,822 + Ac3H11_322 0.40 -0.4 145,822 + Ac3H11_322 0.40 -0.3 145,822 + Ac3H11_322 0.40 +0.4 145,940 + Ac3H11_322 0.50 -0.5 145,940 + Ac3H11_322 0.50 +0.1 145,940 + Ac3H11_322 0.50 -2.7 145,940 + Ac3H11_322 0.50 -0.5 145,941 - Ac3H11_322 0.50 +0.6 145,941 - Ac3H11_322 0.50 +0.6
Or see this region's nucleotide sequence