Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_311 and Ac3H11_312 are separated by 93 nucleotides Ac3H11_312 and Ac3H11_313 are separated by 35 nucleotides Ac3H11_313 and Ac3H11_314 are separated by 849 nucleotides
Ac3H11_311 - hypothetical protein, at 133,038 to 133,157
_311
Ac3H11_312 - DedA protein, at 133,251 to 133,964
_312
Ac3H11_313 - DNA mismatch repair protein MutL, at 134,000 to 136,054
_313
Ac3H11_314 - Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46), at 136,904 to 138,067
_314
Position (kb) 133
134
135
136
137 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 133.926 kb on - strand at 133.996 kb on + strand at 133.997 kb on - strand at 134.488 kb on - strand, within Ac3H11_313 at 134.488 kb on - strand, within Ac3H11_313 at 134.840 kb on + strand, within Ac3H11_313 at 134.840 kb on + strand, within Ac3H11_313 at 134.840 kb on + strand, within Ac3H11_313 at 134.840 kb on + strand, within Ac3H11_313 at 134.840 kb on + strand, within Ac3H11_313 at 134.840 kb on + strand, within Ac3H11_313 at 134.840 kb on + strand, within Ac3H11_313 at 134.841 kb on - strand, within Ac3H11_313 at 134.841 kb on - strand, within Ac3H11_313 at 134.841 kb on - strand, within Ac3H11_313 at 134.841 kb on - strand, within Ac3H11_313 at 134.841 kb on - strand, within Ac3H11_313 at 134.846 kb on + strand, within Ac3H11_313 at 134.846 kb on + strand, within Ac3H11_313 at 134.846 kb on + strand, within Ac3H11_313 at 134.847 kb on - strand, within Ac3H11_313 at 134.847 kb on - strand, within Ac3H11_313 at 134.847 kb on - strand, within Ac3H11_313 at 134.847 kb on - strand, within Ac3H11_313 at 134.903 kb on + strand, within Ac3H11_313 at 134.904 kb on - strand, within Ac3H11_313 at 134.904 kb on - strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.939 kb on + strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.940 kb on - strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.948 kb on + strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 134.949 kb on - strand, within Ac3H11_313 at 135.181 kb on + strand, within Ac3H11_313 at 135.181 kb on + strand, within Ac3H11_313 at 135.182 kb on - strand, within Ac3H11_313 at 135.241 kb on + strand, within Ac3H11_313 at 135.241 kb on + strand, within Ac3H11_313 at 135.241 kb on + strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.242 kb on - strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.244 kb on + strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.245 kb on - strand, within Ac3H11_313 at 135.247 kb on + strand, within Ac3H11_313 at 135.247 kb on + strand, within Ac3H11_313 at 135.247 kb on + strand, within Ac3H11_313 at 135.247 kb on + strand, within Ac3H11_313 at 135.247 kb on + strand, within Ac3H11_313 at 135.248 kb on - strand, within Ac3H11_313 at 135.248 kb on - strand, within Ac3H11_313 at 135.248 kb on - strand, within Ac3H11_313 at 135.248 kb on - strand, within Ac3H11_313 at 135.248 kb on - strand, within Ac3H11_313 at 135.248 kb on - strand, within Ac3H11_313 at 135.259 kb on + strand, within Ac3H11_313 at 135.259 kb on + strand, within Ac3H11_313 at 135.260 kb on - strand, within Ac3H11_313 at 135.260 kb on - strand, within Ac3H11_313 at 135.509 kb on + strand, within Ac3H11_313 at 135.509 kb on + strand, within Ac3H11_313 at 135.509 kb on + strand, within Ac3H11_313 at 135.509 kb on + strand, within Ac3H11_313 at 135.510 kb on - strand, within Ac3H11_313 at 135.510 kb on - strand, within Ac3H11_313 at 135.510 kb on - strand, within Ac3H11_313 at 135.510 kb on - strand, within Ac3H11_313 at 135.510 kb on - strand, within Ac3H11_313 at 135.510 kb on - strand, within Ac3H11_313 at 135.578 kb on + strand, within Ac3H11_313 at 135.578 kb on + strand, within Ac3H11_313 at 135.579 kb on - strand, within Ac3H11_313 at 135.579 kb on - strand, within Ac3H11_313 at 135.579 kb on - strand, within Ac3H11_313 at 135.579 kb on - strand, within Ac3H11_313 at 136.053 kb on - strand at 136.136 kb on + strand at 136.136 kb on + strand at 136.136 kb on + strand at 136.136 kb on + strand at 136.137 kb on - strand at 136.137 kb on - strand at 136.137 kb on - strand at 136.137 kb on - strand at 136.137 kb on - strand at 136.137 kb on - strand at 136.183 kb on + strand at 136.183 kb on + strand at 136.184 kb on - strand at 136.204 kb on + strand at 136.250 kb on - strand at 136.399 kb on + strand at 136.458 kb on + strand at 136.475 kb on + strand at 136.475 kb on + strand at 136.475 kb on + strand at 136.476 kb on - strand at 136.476 kb on - strand at 136.476 kb on - strand at 136.476 kb on - strand at 136.476 kb on - strand at 136.476 kb on - strand at 136.476 kb on - strand at 136.476 kb on - strand at 136.534 kb on + strand at 136.534 kb on + strand at 136.534 kb on + strand at 136.535 kb on - strand at 136.535 kb on - strand at 136.576 kb on - strand at 136.576 kb on - strand at 136.595 kb on + strand at 136.596 kb on - strand at 136.596 kb on - strand at 136.596 kb on - strand at 136.622 kb on - strand at 136.626 kb on + strand at 136.626 kb on + strand at 136.626 kb on + strand at 136.627 kb on - strand at 136.627 kb on - strand at 136.627 kb on - strand at 136.627 kb on - strand at 136.627 kb on - strand at 136.669 kb on - strand at 136.678 kb on + strand at 136.683 kb on + strand at 136.684 kb on - strand at 136.732 kb on + strand at 136.776 kb on + strand at 136.777 kb on - strand at 136.777 kb on - strand at 136.778 kb on + strand at 136.803 kb on + strand at 136.804 kb on - strand at 136.826 kb on + strand at 136.826 kb on + strand at 136.827 kb on - strand at 136.827 kb on - strand at 136.830 kb on + strand at 136.830 kb on + strand at 136.831 kb on - strand at 136.831 kb on - strand at 136.834 kb on + strand at 136.835 kb on - strand at 136.886 kb on + strand at 136.886 kb on + strand at 136.886 kb on + strand at 136.886 kb on + strand at 136.886 kb on + strand at 136.887 kb on - strand at 136.887 kb on - strand at 136.887 kb on - strand at 136.894 kb on + strand at 136.894 kb on + strand at 136.894 kb on + strand at 136.894 kb on + strand at 136.894 kb on + strand at 136.894 kb on + strand at 136.894 kb on + strand at 136.894 kb on + strand at 136.895 kb on - strand at 136.895 kb on - strand at 136.895 kb on - strand at 136.910 kb on - strand at 136.910 kb on - strand at 136.971 kb on + strand at 136.971 kb on + strand at 136.971 kb on + strand at 136.971 kb on + strand at 136.971 kb on + strand at 136.971 kb on + strand at 136.971 kb on + strand at 136.972 kb on - strand at 136.972 kb on - strand at 136.972 kb on - strand at 136.972 kb on - strand at 136.972 kb on - strand at 136.972 kb on - strand at 136.983 kb on + strand at 136.983 kb on + strand at 136.983 kb on + strand at 136.983 kb on + strand at 136.983 kb on + strand at 136.984 kb on - strand at 136.984 kb on - strand at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.046 kb on + strand, within Ac3H11_314 at 137.047 kb on - strand, within Ac3H11_314 at 137.047 kb on - strand, within Ac3H11_314 at 137.047 kb on - strand, within Ac3H11_314 at 137.047 kb on - strand, within Ac3H11_314 at 137.047 kb on - strand, within Ac3H11_314 at 137.047 kb on - strand, within Ac3H11_314 at 137.047 kb on - strand, within Ac3H11_314
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 133,926 - +0.1 133,996 + -0.8 133,997 - -1.7 134,488 - Ac3H11_313 0.24 -1.4 134,488 - Ac3H11_313 0.24 -0.4 134,840 + Ac3H11_313 0.41 +0.3 134,840 + Ac3H11_313 0.41 +0.7 134,840 + Ac3H11_313 0.41 -0.6 134,840 + Ac3H11_313 0.41 +0.3 134,840 + Ac3H11_313 0.41 -3.0 134,840 + Ac3H11_313 0.41 +0.1 134,840 + Ac3H11_313 0.41 -0.2 134,841 - Ac3H11_313 0.41 -2.4 134,841 - Ac3H11_313 0.41 -0.7 134,841 - Ac3H11_313 0.41 +1.2 134,841 - Ac3H11_313 0.41 -0.1 134,841 - Ac3H11_313 0.41 +0.4 134,846 + Ac3H11_313 0.41 +1.1 134,846 + Ac3H11_313 0.41 -0.7 134,846 + Ac3H11_313 0.41 -0.3 134,847 - Ac3H11_313 0.41 -0.0 134,847 - Ac3H11_313 0.41 +0.1 134,847 - Ac3H11_313 0.41 +0.2 134,847 - Ac3H11_313 0.41 -0.4 134,903 + Ac3H11_313 0.44 -0.1 134,904 - Ac3H11_313 0.44 +0.2 134,904 - Ac3H11_313 0.44 +1.0 134,939 + Ac3H11_313 0.46 +2.3 134,939 + Ac3H11_313 0.46 -0.7 134,939 + Ac3H11_313 0.46 -0.8 134,939 + Ac3H11_313 0.46 +1.0 134,939 + Ac3H11_313 0.46 +0.3 134,939 + Ac3H11_313 0.46 -1.4 134,939 + Ac3H11_313 0.46 -1.5 134,939 + Ac3H11_313 0.46 -0.4 134,939 + Ac3H11_313 0.46 +0.3 134,939 + Ac3H11_313 0.46 -0.2 134,939 + Ac3H11_313 0.46 +0.2 134,940 - Ac3H11_313 0.46 +0.2 134,940 - Ac3H11_313 0.46 +1.0 134,940 - Ac3H11_313 0.46 +0.6 134,940 - Ac3H11_313 0.46 -0.9 134,940 - Ac3H11_313 0.46 -0.0 134,940 - Ac3H11_313 0.46 -2.0 134,940 - Ac3H11_313 0.46 -1.2 134,940 - Ac3H11_313 0.46 -0.1 134,940 - Ac3H11_313 0.46 +1.0 134,940 - Ac3H11_313 0.46 +1.5 134,940 - Ac3H11_313 0.46 -0.9 134,948 + Ac3H11_313 0.46 +0.3 134,948 + Ac3H11_313 0.46 +0.2 134,948 + Ac3H11_313 0.46 -0.3 134,948 + Ac3H11_313 0.46 +2.1 134,948 + Ac3H11_313 0.46 +1.1 134,948 + Ac3H11_313 0.46 -0.5 134,948 + Ac3H11_313 0.46 -1.0 134,948 + Ac3H11_313 0.46 -0.0 134,948 + Ac3H11_313 0.46 +0.3 134,949 - Ac3H11_313 0.46 -0.1 134,949 - Ac3H11_313 0.46 -1.0 134,949 - Ac3H11_313 0.46 -0.3 134,949 - Ac3H11_313 0.46 -0.5 134,949 - Ac3H11_313 0.46 +0.6 134,949 - Ac3H11_313 0.46 +0.1 134,949 - Ac3H11_313 0.46 -0.2 134,949 - Ac3H11_313 0.46 +0.3 134,949 - Ac3H11_313 0.46 +0.2 134,949 - Ac3H11_313 0.46 +0.2 135,181 + Ac3H11_313 0.57 -1.1 135,181 + Ac3H11_313 0.57 +0.1 135,182 - Ac3H11_313 0.58 +0.3 135,241 + Ac3H11_313 0.60 +0.6 135,241 + Ac3H11_313 0.60 +1.4 135,241 + Ac3H11_313 0.60 -0.6 135,242 - Ac3H11_313 0.60 -1.3 135,242 - Ac3H11_313 0.60 +0.5 135,242 - Ac3H11_313 0.60 -0.9 135,242 - Ac3H11_313 0.60 -1.1 135,242 - Ac3H11_313 0.60 -3.2 135,242 - Ac3H11_313 0.60 -1.1 135,242 - Ac3H11_313 0.60 -0.5 135,242 - Ac3H11_313 0.60 +0.4 135,242 - Ac3H11_313 0.60 +1.3 135,244 + Ac3H11_313 0.61 -0.1 135,244 + Ac3H11_313 0.61 +0.0 135,244 + Ac3H11_313 0.61 -1.5 135,244 + Ac3H11_313 0.61 +2.0 135,244 + Ac3H11_313 0.61 -1.5 135,244 + Ac3H11_313 0.61 -1.6 135,244 + Ac3H11_313 0.61 -1.2 135,244 + Ac3H11_313 0.61 -0.6 135,244 + Ac3H11_313 0.61 -0.4 135,244 + Ac3H11_313 0.61 -0.4 135,244 + Ac3H11_313 0.61 -1.6 135,244 + Ac3H11_313 0.61 +0.4 135,244 + Ac3H11_313 0.61 -0.0 135,245 - Ac3H11_313 0.61 -0.0 135,245 - Ac3H11_313 0.61 -0.6 135,245 - Ac3H11_313 0.61 -1.1 135,245 - Ac3H11_313 0.61 +1.4 135,245 - Ac3H11_313 0.61 +2.1 135,245 - Ac3H11_313 0.61 +0.9 135,245 - Ac3H11_313 0.61 -3.7 135,245 - Ac3H11_313 0.61 -0.4 135,245 - Ac3H11_313 0.61 -1.4 135,245 - Ac3H11_313 0.61 -1.0 135,245 - Ac3H11_313 0.61 -0.3 135,245 - Ac3H11_313 0.61 -0.0 135,245 - Ac3H11_313 0.61 +0.3 135,245 - Ac3H11_313 0.61 +0.0 135,247 + Ac3H11_313 0.61 -1.2 135,247 + Ac3H11_313 0.61 -0.8 135,247 + Ac3H11_313 0.61 -2.2 135,247 + Ac3H11_313 0.61 -2.2 135,247 + Ac3H11_313 0.61 -0.5 135,248 - Ac3H11_313 0.61 +0.7 135,248 - Ac3H11_313 0.61 -0.9 135,248 - Ac3H11_313 0.61 +0.1 135,248 - Ac3H11_313 0.61 +1.4 135,248 - Ac3H11_313 0.61 +0.4 135,248 - Ac3H11_313 0.61 -0.5 135,259 + Ac3H11_313 0.61 -0.5 135,259 + Ac3H11_313 0.61 -0.4 135,260 - Ac3H11_313 0.61 +0.9 135,260 - Ac3H11_313 0.61 +0.5 135,509 + Ac3H11_313 0.73 -2.0 135,509 + Ac3H11_313 0.73 +0.9 135,509 + Ac3H11_313 0.73 -0.3 135,509 + Ac3H11_313 0.73 +0.9 135,510 - Ac3H11_313 0.73 +0.4 135,510 - Ac3H11_313 0.73 +2.0 135,510 - Ac3H11_313 0.73 -0.0 135,510 - Ac3H11_313 0.73 +0.1 135,510 - Ac3H11_313 0.73 +0.7 135,510 - Ac3H11_313 0.73 -1.0 135,578 + Ac3H11_313 0.77 -2.7 135,578 + Ac3H11_313 0.77 -0.1 135,579 - Ac3H11_313 0.77 -1.2 135,579 - Ac3H11_313 0.77 +0.1 135,579 - Ac3H11_313 0.77 -0.7 135,579 - Ac3H11_313 0.77 +0.7 136,053 - +0.1 136,136 + +0.2 136,136 + +1.0 136,136 + -1.2 136,136 + -1.5 136,137 - -0.7 136,137 - +0.1 136,137 - +0.1 136,137 - -0.9 136,137 - -0.1 136,137 - -0.3 136,183 + +0.4 136,183 + -0.1 136,184 - +0.3 136,204 + +1.4 136,250 - +2.0 136,399 + -0.0 136,458 + +0.5 136,475 + -0.8 136,475 + +0.1 136,475 + +0.7 136,476 - +0.4 136,476 - -0.1 136,476 - -0.0 136,476 - +0.3 136,476 - -0.9 136,476 - -0.6 136,476 - +0.3 136,476 - +0.4 136,534 + -0.3 136,534 + -0.4 136,534 + +0.7 136,535 - -0.7 136,535 - +0.0 136,576 - -0.1 136,576 - -1.7 136,595 + +1.7 136,596 - -1.3 136,596 - +0.2 136,596 - +0.6 136,622 - +0.6 136,626 + +1.3 136,626 + +1.1 136,626 + +0.2 136,627 - -0.6 136,627 - -1.1 136,627 - +1.0 136,627 - -1.2 136,627 - +0.5 136,669 - -0.0 136,678 + +0.9 136,683 + +0.5 136,684 - -0.3 136,732 + +0.4 136,776 + +0.8 136,777 - -0.6 136,777 - -0.4 136,778 + +0.5 136,803 + -0.4 136,804 - -0.2 136,826 + +1.2 136,826 + +0.4 136,827 - -0.6 136,827 - -0.4 136,830 + -1.1 136,830 + -1.2 136,831 - +0.2 136,831 - -0.9 136,834 + +0.1 136,835 - -0.2 136,886 + +0.4 136,886 + -0.2 136,886 + -0.9 136,886 + +1.4 136,886 + +0.8 136,887 - +0.3 136,887 - -1.6 136,887 - -0.3 136,894 + -0.2 136,894 + +0.7 136,894 + +0.7 136,894 + -2.7 136,894 + -0.6 136,894 + -0.9 136,894 + -1.9 136,894 + -0.6 136,895 - -1.0 136,895 - -0.2 136,895 - +0.5 136,910 - +0.2 136,910 - -0.5 136,971 + +0.4 136,971 + -0.4 136,971 + -0.4 136,971 + -0.1 136,971 + -1.1 136,971 + -0.0 136,971 + +0.0 136,972 - -0.2 136,972 - +0.1 136,972 - +0.4 136,972 - -1.7 136,972 - -2.7 136,972 - +1.0 136,983 + -1.7 136,983 + +0.4 136,983 + +1.0 136,983 + -1.1 136,983 + +0.4 136,984 - -1.2 136,984 - -0.2 137,046 + Ac3H11_314 0.12 +0.9 137,046 + Ac3H11_314 0.12 -1.2 137,046 + Ac3H11_314 0.12 +0.3 137,046 + Ac3H11_314 0.12 -0.6 137,046 + Ac3H11_314 0.12 +0.7 137,046 + Ac3H11_314 0.12 -1.9 137,046 + Ac3H11_314 0.12 +0.1 137,046 + Ac3H11_314 0.12 -0.9 137,046 + Ac3H11_314 0.12 -0.2 137,046 + Ac3H11_314 0.12 +0.4 137,046 + Ac3H11_314 0.12 +0.1 137,047 - Ac3H11_314 0.12 -0.0 137,047 - Ac3H11_314 0.12 +1.0 137,047 - Ac3H11_314 0.12 -2.6 137,047 - Ac3H11_314 0.12 +0.9 137,047 - Ac3H11_314 0.12 -0.6 137,047 - Ac3H11_314 0.12 -0.6 137,047 - Ac3H11_314 0.12 -0.6
Or see this region's nucleotide sequence