Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_308 and Ac3H11_309 are separated by 207 nucleotides Ac3H11_309 and Ac3H11_310 are separated by 42 nucleotides Ac3H11_310 and Ac3H11_311 are separated by 383 nucleotides Ac3H11_311 and Ac3H11_312 are separated by 93 nucleotides
Ac3H11_308 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 129,028 to 130,491
_308
Ac3H11_309 - hypothetical protein, at 130,699 to 131,031
_309
Ac3H11_310 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 131,074 to 132,654
_310
Ac3H11_311 - hypothetical protein, at 133,038 to 133,157
_311
Ac3H11_312 - DedA protein, at 133,251 to 133,964
_312
Position (kb) 131
132
133 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 130.489 kb on + strand at 130.489 kb on + strand at 130.489 kb on + strand at 130.490 kb on - strand at 130.490 kb on - strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.607 kb on - strand at 132.059 kb on + strand, within Ac3H11_310 at 132.116 kb on + strand, within Ac3H11_310 at 132.117 kb on - strand, within Ac3H11_310 at 132.117 kb on - strand, within Ac3H11_310 at 132.117 kb on - strand, within Ac3H11_310 at 132.117 kb on - strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.150 kb on + strand, within Ac3H11_310 at 132.150 kb on + strand, within Ac3H11_310 at 132.150 kb on + strand, within Ac3H11_310 at 132.150 kb on + strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.248 kb on + strand, within Ac3H11_310 at 132.248 kb on + strand, within Ac3H11_310 at 132.317 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.375 kb on - strand, within Ac3H11_310 at 132.375 kb on - strand, within Ac3H11_310 at 132.375 kb on - strand, within Ac3H11_310 at 132.375 kb on - strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.737 kb on + strand at 132.737 kb on + strand at 132.737 kb on + strand at 132.737 kb on + strand at 132.737 kb on + strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.745 kb on + strand at 132.745 kb on + strand at 132.745 kb on + strand at 132.746 kb on - strand at 132.791 kb on - strand at 132.813 kb on + strand at 132.813 kb on + strand at 132.813 kb on + strand at 132.814 kb on - strand at 132.814 kb on - strand at 132.814 kb on - strand at 132.841 kb on - strand at 132.841 kb on - strand at 132.841 kb on - strand at 132.841 kb on - strand at 132.887 kb on - strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.935 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 130,489 + +0.6 130,489 + +0.2 130,489 + -0.1 130,490 - -0.4 130,490 - -1.4 130,606 + +0.4 130,606 + +1.4 130,606 + -0.6 130,606 + -0.7 130,606 + +0.4 130,606 + -0.4 130,607 - +0.3 130,607 - +1.1 130,607 - +0.4 130,607 - -0.7 130,607 - +0.1 130,607 - -0.5 132,059 + Ac3H11_310 0.62 +0.7 132,116 + Ac3H11_310 0.66 -1.1 132,117 - Ac3H11_310 0.66 -0.1 132,117 - Ac3H11_310 0.66 -0.6 132,117 - Ac3H11_310 0.66 -0.9 132,117 - Ac3H11_310 0.66 +0.3 132,146 + Ac3H11_310 0.68 +0.4 132,146 + Ac3H11_310 0.68 +0.8 132,146 + Ac3H11_310 0.68 -0.0 132,146 + Ac3H11_310 0.68 -0.3 132,146 + Ac3H11_310 0.68 -0.2 132,146 + Ac3H11_310 0.68 -1.3 132,146 + Ac3H11_310 0.68 -1.7 132,146 + Ac3H11_310 0.68 +0.2 132,146 + Ac3H11_310 0.68 -0.4 132,146 + Ac3H11_310 0.68 +0.7 132,146 + Ac3H11_310 0.68 -1.6 132,146 + Ac3H11_310 0.68 +0.5 132,146 + Ac3H11_310 0.68 -1.3 132,146 + Ac3H11_310 0.68 +0.5 132,146 + Ac3H11_310 0.68 -1.3 132,147 - Ac3H11_310 0.68 -0.6 132,147 - Ac3H11_310 0.68 -1.1 132,147 - Ac3H11_310 0.68 +0.8 132,147 - Ac3H11_310 0.68 -0.9 132,147 - Ac3H11_310 0.68 -2.4 132,147 - Ac3H11_310 0.68 +0.6 132,147 - Ac3H11_310 0.68 +0.1 132,147 - Ac3H11_310 0.68 -0.0 132,147 - Ac3H11_310 0.68 -0.3 132,150 + Ac3H11_310 0.68 +0.1 132,150 + Ac3H11_310 0.68 -1.5 132,150 + Ac3H11_310 0.68 -1.2 132,150 + Ac3H11_310 0.68 -1.9 132,151 - Ac3H11_310 0.68 -1.4 132,151 - Ac3H11_310 0.68 +1.0 132,151 - Ac3H11_310 0.68 +0.1 132,151 - Ac3H11_310 0.68 -0.2 132,151 - Ac3H11_310 0.68 +0.1 132,151 - Ac3H11_310 0.68 -0.0 132,151 - Ac3H11_310 0.68 -0.7 132,248 + Ac3H11_310 0.74 -1.2 132,248 + Ac3H11_310 0.74 -0.9 132,317 + Ac3H11_310 0.79 -1.4 132,374 + Ac3H11_310 0.82 -1.2 132,374 + Ac3H11_310 0.82 -0.1 132,374 + Ac3H11_310 0.82 -0.0 132,374 + Ac3H11_310 0.82 -0.8 132,374 + Ac3H11_310 0.82 +1.1 132,374 + Ac3H11_310 0.82 -0.6 132,375 - Ac3H11_310 0.82 -0.6 132,375 - Ac3H11_310 0.82 +1.5 132,375 - Ac3H11_310 0.82 -1.0 132,375 - Ac3H11_310 0.82 +2.1 132,438 + Ac3H11_310 0.86 -0.6 132,438 + Ac3H11_310 0.86 +0.1 132,438 + Ac3H11_310 0.86 -2.0 132,438 + Ac3H11_310 0.86 +0.8 132,438 + Ac3H11_310 0.86 -2.1 132,439 - Ac3H11_310 0.86 +0.3 132,439 - Ac3H11_310 0.86 -1.6 132,439 - Ac3H11_310 0.86 -1.5 132,439 - Ac3H11_310 0.86 -0.1 132,439 - Ac3H11_310 0.86 +0.1 132,439 - Ac3H11_310 0.86 -0.3 132,439 - Ac3H11_310 0.86 +0.2 132,439 - Ac3H11_310 0.86 -0.6 132,439 - Ac3H11_310 0.86 -1.1 132,439 - Ac3H11_310 0.86 -0.2 132,439 - Ac3H11_310 0.86 -0.2 132,439 - Ac3H11_310 0.86 -1.2 132,439 - Ac3H11_310 0.86 -1.0 132,669 + -0.6 132,669 + +0.1 132,669 + -1.3 132,669 + +0.2 132,669 + +0.4 132,669 + +1.1 132,669 + +0.4 132,669 + +2.0 132,669 + -0.0 132,669 + +1.4 132,670 - -0.3 132,670 - +0.0 132,670 - +3.3 132,670 - -1.2 132,670 - -0.4 132,670 - +1.0 132,670 - +0.6 132,670 - -0.6 132,737 + +1.3 132,737 + -0.3 132,737 + +1.3 132,737 + +0.0 132,737 + -0.1 132,738 - +0.5 132,738 - -0.2 132,738 - -0.3 132,738 - -1.0 132,738 - -0.4 132,738 - +0.0 132,738 - +0.1 132,738 - -0.7 132,745 + +1.1 132,745 + -0.2 132,745 + +1.0 132,746 - -0.3 132,791 - +0.1 132,813 + +0.2 132,813 + -0.4 132,813 + -1.1 132,814 - +1.3 132,814 - -1.7 132,814 - -0.3 132,841 - -2.2 132,841 - -0.2 132,841 - -0.0 132,841 - +0.9 132,887 - -0.2 132,912 + +0.4 132,912 + -0.8 132,912 + +0.2 132,912 + +0.4 132,912 + -1.7 132,912 + -1.4 132,912 + +0.5 132,913 - +1.1 132,913 - -0.3 132,913 - +0.9 132,913 - -0.2 132,913 - +1.1 132,913 - -1.0 132,913 - +0.7 132,935 - -1.4
Or see this region's nucleotide sequence