Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3073 and Ac3H11_3074 are separated by 813 nucleotides
Ac3H11_3073 - FMN-dependent NADH-azoreductase, at 97,994 to 98,569
_3073
Ac3H11_3074 - hypothetical protein, at 99,383 to 99,502
_3074
Position (kb) 97
98
99 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 97.036 kb on + strand at 97.036 kb on + strand at 97.036 kb on + strand at 97.036 kb on + strand at 97.037 kb on - strand at 97.037 kb on - strand at 97.037 kb on - strand at 97.037 kb on - strand at 97.039 kb on + strand at 97.039 kb on + strand at 97.039 kb on + strand at 97.039 kb on + strand at 97.040 kb on - strand at 97.040 kb on - strand at 97.040 kb on - strand at 97.098 kb on + strand at 97.168 kb on + strand at 97.169 kb on - strand at 97.183 kb on - strand at 97.183 kb on - strand at 97.183 kb on - strand at 97.294 kb on + strand at 97.294 kb on + strand at 97.294 kb on + strand at 97.294 kb on + strand at 97.294 kb on + strand at 97.294 kb on + strand at 97.295 kb on - strand at 97.295 kb on - strand at 97.295 kb on - strand at 97.295 kb on - strand at 97.295 kb on - strand at 97.390 kb on + strand at 97.390 kb on + strand at 97.390 kb on + strand at 97.390 kb on + strand at 97.391 kb on - strand at 97.410 kb on + strand at 97.410 kb on + strand at 97.411 kb on - strand at 97.580 kb on - strand at 97.580 kb on - strand at 97.732 kb on + strand at 97.732 kb on + strand at 97.764 kb on + strand at 97.765 kb on - strand at 97.765 kb on - strand at 97.765 kb on - strand at 97.775 kb on + strand at 97.775 kb on + strand at 97.775 kb on + strand at 97.775 kb on + strand at 97.776 kb on - strand at 97.776 kb on - strand at 97.776 kb on - strand at 97.776 kb on - strand at 97.776 kb on - strand at 97.875 kb on + strand at 97.876 kb on - strand at 97.876 kb on - strand at 97.907 kb on - strand at 97.915 kb on + strand at 97.916 kb on - strand at 97.916 kb on - strand at 97.916 kb on - strand at 97.916 kb on - strand at 97.916 kb on - strand at 97.951 kb on + strand at 97.951 kb on + strand at 97.952 kb on - strand at 97.952 kb on - strand at 97.952 kb on - strand at 97.952 kb on - strand at 98.004 kb on + strand at 98.004 kb on + strand at 98.005 kb on - strand at 98.110 kb on + strand, within Ac3H11_3073 at 98.111 kb on - strand, within Ac3H11_3073 at 98.111 kb on - strand, within Ac3H11_3073 at 98.123 kb on + strand, within Ac3H11_3073 at 98.123 kb on + strand, within Ac3H11_3073 at 98.123 kb on + strand, within Ac3H11_3073 at 98.123 kb on + strand, within Ac3H11_3073 at 98.123 kb on + strand, within Ac3H11_3073 at 98.124 kb on - strand, within Ac3H11_3073 at 98.124 kb on - strand, within Ac3H11_3073 at 98.124 kb on - strand, within Ac3H11_3073 at 98.173 kb on - strand, within Ac3H11_3073 at 98.173 kb on - strand, within Ac3H11_3073 at 98.230 kb on + strand, within Ac3H11_3073 at 98.230 kb on + strand, within Ac3H11_3073 at 98.231 kb on - strand, within Ac3H11_3073 at 98.231 kb on - strand, within Ac3H11_3073 at 98.231 kb on - strand, within Ac3H11_3073 at 98.231 kb on - strand, within Ac3H11_3073 at 98.234 kb on + strand, within Ac3H11_3073 at 98.234 kb on + strand, within Ac3H11_3073 at 98.234 kb on + strand, within Ac3H11_3073 at 98.235 kb on - strand, within Ac3H11_3073 at 98.235 kb on - strand, within Ac3H11_3073 at 98.235 kb on - strand, within Ac3H11_3073 at 98.235 kb on - strand, within Ac3H11_3073 at 98.235 kb on - strand, within Ac3H11_3073 at 98.366 kb on + strand, within Ac3H11_3073 at 98.367 kb on - strand, within Ac3H11_3073 at 98.367 kb on - strand, within Ac3H11_3073 at 98.382 kb on - strand, within Ac3H11_3073 at 98.421 kb on - strand, within Ac3H11_3073 at 98.421 kb on - strand, within Ac3H11_3073 at 98.460 kb on + strand, within Ac3H11_3073 at 98.460 kb on + strand, within Ac3H11_3073 at 98.461 kb on - strand, within Ac3H11_3073 at 98.469 kb on + strand, within Ac3H11_3073 at 98.470 kb on - strand, within Ac3H11_3073 at 98.470 kb on - strand, within Ac3H11_3073 at 98.470 kb on - strand, within Ac3H11_3073 at 98.470 kb on - strand, within Ac3H11_3073 at 98.470 kb on - strand, within Ac3H11_3073 at 98.475 kb on + strand, within Ac3H11_3073 at 98.475 kb on + strand, within Ac3H11_3073 at 98.475 kb on + strand, within Ac3H11_3073 at 98.475 kb on + strand, within Ac3H11_3073 at 98.475 kb on + strand, within Ac3H11_3073 at 98.475 kb on + strand, within Ac3H11_3073 at 98.476 kb on - strand, within Ac3H11_3073 at 98.476 kb on - strand, within Ac3H11_3073 at 98.476 kb on - strand, within Ac3H11_3073 at 98.476 kb on - strand, within Ac3H11_3073 at 98.476 kb on - strand, within Ac3H11_3073 at 98.476 kb on - strand, within Ac3H11_3073 at 98.499 kb on + strand, within Ac3H11_3073 at 98.750 kb on + strand at 98.751 kb on - strand at 99.019 kb on + strand at 99.019 kb on + strand at 99.019 kb on + strand at 99.020 kb on - strand at 99.020 kb on - strand at 99.020 kb on - strand at 99.020 kb on - strand at 99.101 kb on + strand at 99.101 kb on + strand at 99.102 kb on - strand at 99.102 kb on - strand at 99.102 kb on - strand at 99.298 kb on + strand at 99.298 kb on + strand at 99.298 kb on + strand at 99.298 kb on + strand at 99.298 kb on + strand at 99.299 kb on - strand at 99.299 kb on - strand at 99.299 kb on - strand at 99.299 kb on - strand at 99.354 kb on + strand at 99.355 kb on - strand at 99.355 kb on - strand at 99.355 kb on - strand at 99.355 kb on - strand at 99.407 kb on + strand, within Ac3H11_3074 at 99.407 kb on + strand, within Ac3H11_3074 at 99.407 kb on + strand, within Ac3H11_3074 at 99.407 kb on + strand, within Ac3H11_3074 at 99.408 kb on - strand, within Ac3H11_3074 at 99.408 kb on - strand, within Ac3H11_3074 at 99.408 kb on - strand, within Ac3H11_3074 at 99.408 kb on - strand, within Ac3H11_3074 at 99.408 kb on - strand, within Ac3H11_3074 at 99.416 kb on + strand, within Ac3H11_3074 at 99.416 kb on + strand, within Ac3H11_3074 at 99.416 kb on + strand, within Ac3H11_3074 at 99.417 kb on - strand, within Ac3H11_3074 at 99.418 kb on + strand, within Ac3H11_3074 at 99.418 kb on + strand, within Ac3H11_3074 at 99.418 kb on + strand, within Ac3H11_3074 at 99.418 kb on + strand, within Ac3H11_3074 at 99.418 kb on + strand, within Ac3H11_3074 at 99.419 kb on - strand, within Ac3H11_3074 at 99.432 kb on - strand, within Ac3H11_3074 at 99.432 kb on - strand, within Ac3H11_3074 at 99.497 kb on + strand at 99.497 kb on + strand at 99.498 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 97,036 + -1.4 97,036 + +1.3 97,036 + +0.3 97,036 + +0.4 97,037 - +0.2 97,037 - +1.6 97,037 - -0.0 97,037 - +0.6 97,039 + +0.3 97,039 + +0.5 97,039 + -1.1 97,039 + +1.3 97,040 - -0.0 97,040 - +0.8 97,040 - +1.1 97,098 + -0.6 97,168 + +0.6 97,169 - -0.3 97,183 - -0.8 97,183 - +0.6 97,183 - +0.3 97,294 + +0.8 97,294 + -1.5 97,294 + +2.3 97,294 + -1.0 97,294 + -0.5 97,294 + -1.0 97,295 - -2.0 97,295 - -0.8 97,295 - +0.6 97,295 - -0.4 97,295 - +0.7 97,390 + +0.9 97,390 + +1.9 97,390 + -0.3 97,390 + -0.4 97,391 - +0.3 97,410 + -1.6 97,410 + +0.5 97,411 - +0.5 97,580 - +1.4 97,580 - -0.3 97,732 + -1.3 97,732 + +0.5 97,764 + +0.2 97,765 - +0.7 97,765 - -1.0 97,765 - +1.4 97,775 + -0.1 97,775 + +1.1 97,775 + +0.7 97,775 + -0.5 97,776 - +0.2 97,776 - +0.6 97,776 - -0.2 97,776 - -0.7 97,776 - +1.4 97,875 + +0.5 97,876 - -0.4 97,876 - +0.5 97,907 - -1.6 97,915 + +0.9 97,916 - +0.6 97,916 - +0.1 97,916 - +1.3 97,916 - +0.5 97,916 - +0.4 97,951 + +1.0 97,951 + +1.9 97,952 - +3.3 97,952 - +0.6 97,952 - -0.3 97,952 - +1.0 98,004 + -1.4 98,004 + +0.7 98,005 - -0.2 98,110 + Ac3H11_3073 0.20 -0.6 98,111 - Ac3H11_3073 0.20 -0.5 98,111 - Ac3H11_3073 0.20 -0.2 98,123 + Ac3H11_3073 0.22 -0.4 98,123 + Ac3H11_3073 0.22 -0.6 98,123 + Ac3H11_3073 0.22 +0.4 98,123 + Ac3H11_3073 0.22 -0.6 98,123 + Ac3H11_3073 0.22 +0.1 98,124 - Ac3H11_3073 0.23 -0.9 98,124 - Ac3H11_3073 0.23 +0.9 98,124 - Ac3H11_3073 0.23 -1.7 98,173 - Ac3H11_3073 0.31 -0.3 98,173 - Ac3H11_3073 0.31 -2.1 98,230 + Ac3H11_3073 0.41 +0.4 98,230 + Ac3H11_3073 0.41 -0.1 98,231 - Ac3H11_3073 0.41 -0.4 98,231 - Ac3H11_3073 0.41 +0.9 98,231 - Ac3H11_3073 0.41 -0.6 98,231 - Ac3H11_3073 0.41 -0.2 98,234 + Ac3H11_3073 0.42 +0.3 98,234 + Ac3H11_3073 0.42 +2.0 98,234 + Ac3H11_3073 0.42 -2.1 98,235 - Ac3H11_3073 0.42 -0.5 98,235 - Ac3H11_3073 0.42 -0.5 98,235 - Ac3H11_3073 0.42 -0.8 98,235 - Ac3H11_3073 0.42 +0.8 98,235 - Ac3H11_3073 0.42 +0.4 98,366 + Ac3H11_3073 0.65 +0.8 98,367 - Ac3H11_3073 0.65 +0.7 98,367 - Ac3H11_3073 0.65 +0.5 98,382 - Ac3H11_3073 0.67 -0.9 98,421 - Ac3H11_3073 0.74 +0.3 98,421 - Ac3H11_3073 0.74 +1.7 98,460 + Ac3H11_3073 0.81 -0.2 98,460 + Ac3H11_3073 0.81 -0.6 98,461 - Ac3H11_3073 0.81 +0.2 98,469 + Ac3H11_3073 0.82 -1.5 98,470 - Ac3H11_3073 0.83 -0.2 98,470 - Ac3H11_3073 0.83 +1.0 98,470 - Ac3H11_3073 0.83 +1.1 98,470 - Ac3H11_3073 0.83 +1.1 98,470 - Ac3H11_3073 0.83 -0.6 98,475 + Ac3H11_3073 0.84 +1.5 98,475 + Ac3H11_3073 0.84 +0.6 98,475 + Ac3H11_3073 0.84 +0.1 98,475 + Ac3H11_3073 0.84 -1.5 98,475 + Ac3H11_3073 0.84 -1.2 98,475 + Ac3H11_3073 0.84 -1.7 98,476 - Ac3H11_3073 0.84 +0.8 98,476 - Ac3H11_3073 0.84 +0.8 98,476 - Ac3H11_3073 0.84 -2.0 98,476 - Ac3H11_3073 0.84 -0.5 98,476 - Ac3H11_3073 0.84 +0.3 98,476 - Ac3H11_3073 0.84 -0.4 98,499 + Ac3H11_3073 0.88 +1.0 98,750 + -1.3 98,751 - -0.0 99,019 + +0.8 99,019 + +0.9 99,019 + -0.3 99,020 - +0.7 99,020 - -1.5 99,020 - +0.1 99,020 - -0.1 99,101 + +0.8 99,101 + +0.3 99,102 - +0.9 99,102 - +2.3 99,102 - -1.0 99,298 + +0.7 99,298 + +0.2 99,298 + -1.1 99,298 + +0.1 99,298 + +0.8 99,299 - +1.2 99,299 - +1.3 99,299 - -2.8 99,299 - -0.0 99,354 + -0.4 99,355 - -0.7 99,355 - +0.3 99,355 - +2.1 99,355 - -0.0 99,407 + Ac3H11_3074 0.20 -0.6 99,407 + Ac3H11_3074 0.20 +1.3 99,407 + Ac3H11_3074 0.20 -0.6 99,407 + Ac3H11_3074 0.20 -0.1 99,408 - Ac3H11_3074 0.21 +0.9 99,408 - Ac3H11_3074 0.21 +0.2 99,408 - Ac3H11_3074 0.21 +1.3 99,408 - Ac3H11_3074 0.21 +0.7 99,408 - Ac3H11_3074 0.21 +0.1 99,416 + Ac3H11_3074 0.28 -1.5 99,416 + Ac3H11_3074 0.28 -0.8 99,416 + Ac3H11_3074 0.28 -0.7 99,417 - Ac3H11_3074 0.28 +0.2 99,418 + Ac3H11_3074 0.29 -0.2 99,418 + Ac3H11_3074 0.29 -0.5 99,418 + Ac3H11_3074 0.29 +0.2 99,418 + Ac3H11_3074 0.29 -0.4 99,418 + Ac3H11_3074 0.29 -0.9 99,419 - Ac3H11_3074 0.30 -1.2 99,432 - Ac3H11_3074 0.41 +0.2 99,432 - Ac3H11_3074 0.41 +0.0 99,497 + +1.4 99,497 + -0.6 99,498 - -0.3
Or see this region's nucleotide sequence