Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_271 and Ac3H11_272 are separated by 10 nucleotides Ac3H11_272 and Ac3H11_273 are separated by 32 nucleotides
Ac3H11_271 - Topoisomerase IV subunit A (EC 5.99.1.-), at 94,124 to 96,481
_271
Ac3H11_272 - Lytic transglycosylase, catalytic, at 96,492 to 97,355
_272
Ac3H11_273 - Topoisomerase IV subunit B (EC 5.99.1.-), at 97,388 to 99,424
_273
Position (kb) 96
97
98 Strain fitness (log2 ratio) -2
-1
0
1
2 at 96.670 kb on + strand, within Ac3H11_272 at 96.671 kb on - strand, within Ac3H11_272 at 96.671 kb on - strand, within Ac3H11_272 at 96.671 kb on - strand, within Ac3H11_272 at 96.671 kb on - strand, within Ac3H11_272 at 96.671 kb on - strand, within Ac3H11_272 at 96.694 kb on + strand, within Ac3H11_272 at 96.695 kb on - strand, within Ac3H11_272 at 96.695 kb on - strand, within Ac3H11_272 at 96.695 kb on - strand, within Ac3H11_272 at 96.695 kb on - strand, within Ac3H11_272 at 96.695 kb on - strand, within Ac3H11_272 at 96.695 kb on - strand, within Ac3H11_272 at 96.695 kb on - strand, within Ac3H11_272 at 96.763 kb on + strand, within Ac3H11_272 at 96.764 kb on - strand, within Ac3H11_272 at 96.764 kb on - strand, within Ac3H11_272 at 96.820 kb on + strand, within Ac3H11_272 at 96.821 kb on - strand, within Ac3H11_272 at 96.821 kb on - strand, within Ac3H11_272 at 97.013 kb on - strand, within Ac3H11_272 at 97.013 kb on - strand, within Ac3H11_272 at 97.013 kb on - strand, within Ac3H11_272 at 97.067 kb on - strand, within Ac3H11_272 at 97.067 kb on - strand, within Ac3H11_272 at 97.067 kb on - strand, within Ac3H11_272 at 97.067 kb on - strand, within Ac3H11_272 at 97.124 kb on - strand, within Ac3H11_272 at 97.124 kb on - strand, within Ac3H11_272 at 97.196 kb on - strand, within Ac3H11_272 at 97.389 kb on + strand at 97.389 kb on + strand at 97.389 kb on + strand at 97.389 kb on + strand at 97.390 kb on - strand at 97.390 kb on - strand at 97.390 kb on - strand at 97.390 kb on - strand at 97.390 kb on - strand at 97.390 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 96,670 + Ac3H11_272 0.21 +2.0 96,671 - Ac3H11_272 0.21 +0.3 96,671 - Ac3H11_272 0.21 +1.0 96,671 - Ac3H11_272 0.21 +0.2 96,671 - Ac3H11_272 0.21 +0.4 96,671 - Ac3H11_272 0.21 +1.1 96,694 + Ac3H11_272 0.23 +0.4 96,695 - Ac3H11_272 0.23 +0.2 96,695 - Ac3H11_272 0.23 -1.6 96,695 - Ac3H11_272 0.23 +1.7 96,695 - Ac3H11_272 0.23 +1.2 96,695 - Ac3H11_272 0.23 +1.0 96,695 - Ac3H11_272 0.23 -1.6 96,695 - Ac3H11_272 0.23 -0.7 96,763 + Ac3H11_272 0.31 -0.4 96,764 - Ac3H11_272 0.31 -1.5 96,764 - Ac3H11_272 0.31 +0.2 96,820 + Ac3H11_272 0.38 -2.4 96,821 - Ac3H11_272 0.38 -1.5 96,821 - Ac3H11_272 0.38 +1.1 97,013 - Ac3H11_272 0.60 +2.6 97,013 - Ac3H11_272 0.60 +0.2 97,013 - Ac3H11_272 0.60 +0.1 97,067 - Ac3H11_272 0.67 +0.5 97,067 - Ac3H11_272 0.67 -0.9 97,067 - Ac3H11_272 0.67 +2.5 97,067 - Ac3H11_272 0.67 -0.4 97,124 - Ac3H11_272 0.73 -0.5 97,124 - Ac3H11_272 0.73 -0.4 97,196 - Ac3H11_272 0.81 +0.8 97,389 + -0.7 97,389 + +1.0 97,389 + -0.4 97,389 + +0.1 97,390 - -0.1 97,390 - -0.2 97,390 - -0.4 97,390 - -0.5 97,390 - +0.4 97,390 - +0.4
Or see this region's nucleotide sequence