Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2082 and Ac3H11_2083 are separated by 38 nucleotides Ac3H11_2083 and Ac3H11_2084 are separated by 234 nucleotides Ac3H11_2084 and Ac3H11_2085 are separated by 133 nucleotides
Ac3H11_2082 - Phosphogluconate dehydratase (EC 4.2.1.12), at 307,523 to 309,292
_2082
Ac3H11_2083 - 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14), at 309,331 to 309,960
_2083
Ac3H11_2084 - protein of unknown function DUF805, at 310,195 to 310,497
_2084
Ac3H11_2085 - hypothetical protein, at 310,631 to 311,494
_2085
Position (kb) 309
310 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 309.290 kb on + strand at 309.290 kb on + strand at 309.290 kb on + strand at 309.291 kb on - strand at 309.291 kb on - strand at 309.291 kb on - strand at 309.291 kb on - strand at 309.291 kb on - strand at 309.303 kb on - strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.318 kb on + strand at 309.318 kb on + strand at 309.318 kb on + strand at 309.318 kb on + strand at 309.319 kb on - strand at 309.393 kb on - strand at 309.808 kb on - strand at 309.829 kb on + strand, within Ac3H11_2083 at 309.829 kb on + strand, within Ac3H11_2083 at 309.981 kb on + strand at 310.016 kb on - strand at 310.028 kb on - strand at 310.127 kb on - strand at 310.195 kb on - strand at 310.234 kb on + strand, within Ac3H11_2084 at 310.234 kb on + strand, within Ac3H11_2084 at 310.336 kb on + strand, within Ac3H11_2084 at 310.337 kb on - strand, within Ac3H11_2084 at 310.337 kb on - strand, within Ac3H11_2084 at 310.337 kb on - strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.466 kb on - strand, within Ac3H11_2084 at 310.466 kb on - strand, within Ac3H11_2084 at 310.466 kb on - strand, within Ac3H11_2084 at 310.668 kb on + strand at 310.669 kb on - strand at 310.669 kb on - strand at 310.669 kb on - strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.714 kb on - strand at 310.714 kb on - strand at 310.714 kb on - strand at 310.714 kb on - strand at 310.759 kb on - strand, within Ac3H11_2085 at 310.918 kb on - strand, within Ac3H11_2085
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 309,290 + -2.7 309,290 + +0.4 309,290 + -0.1 309,291 - -0.5 309,291 - -1.6 309,291 - -0.6 309,291 - -2.0 309,291 - -0.8 309,303 - -1.4 309,314 + +0.2 309,314 + -0.6 309,314 + -1.0 309,314 + +0.0 309,314 + -0.9 309,314 + +0.3 309,314 + -1.4 309,314 + -0.5 309,314 + -2.2 309,315 - -2.0 309,315 - +1.5 309,315 - -0.5 309,315 - -0.9 309,315 - -2.0 309,315 - -1.3 309,315 - -0.6 309,315 - -1.8 309,318 + -1.2 309,318 + +3.1 309,318 + -0.6 309,318 + -0.2 309,319 - -1.5 309,393 - +0.3 309,808 - -0.3 309,829 + Ac3H11_2083 0.79 +1.1 309,829 + Ac3H11_2083 0.79 -1.9 309,981 + -0.5 310,016 - +0.5 310,028 - -0.2 310,127 - -0.1 310,195 - +0.1 310,234 + Ac3H11_2084 0.13 +0.7 310,234 + Ac3H11_2084 0.13 +0.4 310,336 + Ac3H11_2084 0.47 +0.6 310,337 - Ac3H11_2084 0.47 +2.7 310,337 - Ac3H11_2084 0.47 -0.8 310,337 - Ac3H11_2084 0.47 -0.5 310,465 + Ac3H11_2084 0.89 +0.1 310,465 + Ac3H11_2084 0.89 -0.2 310,465 + Ac3H11_2084 0.89 +0.1 310,465 + Ac3H11_2084 0.89 -1.0 310,465 + Ac3H11_2084 0.89 +0.1 310,466 - Ac3H11_2084 0.89 +1.0 310,466 - Ac3H11_2084 0.89 +0.8 310,466 - Ac3H11_2084 0.89 +0.1 310,668 + +0.3 310,669 - -0.4 310,669 - -2.2 310,669 - +0.1 310,713 + -1.0 310,713 + +0.1 310,713 + -0.7 310,713 + -0.8 310,713 + -0.0 310,713 + -1.7 310,714 - -1.6 310,714 - +2.8 310,714 - +3.4 310,714 - -0.4 310,759 - Ac3H11_2085 0.15 +2.1 310,918 - Ac3H11_2085 0.33 -0.3
Or see this region's nucleotide sequence