Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_986 and Ac3H11_987 overlap by 4 nucleotides Ac3H11_987 and Ac3H11_988 overlap by 1 nucleotides Ac3H11_988 and Ac3H11_989 overlap by 4 nucleotides
Ac3H11_986 - Cobyrinic acid A,C-diamide synthase, at 108,303 to 109,664
_986
Ac3H11_987 - Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62), at 109,661 to 110,248
_987
Ac3H11_988 - Vitamin B12 ABC transporter, B12-binding component BtuF, at 110,248 to 111,150
_988
Ac3H11_989 - Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1), at 111,147 to 112,181
_989
Position (kb)
109
110
111 Strain fitness (log2 ratio)
-1
0
1 at 109.107 kb on + strand, within Ac3H11_986 at 109.107 kb on + strand, within Ac3H11_986 at 109.107 kb on + strand, within Ac3H11_986 at 109.107 kb on + strand, within Ac3H11_986 at 109.108 kb on - strand, within Ac3H11_986 at 109.108 kb on - strand, within Ac3H11_986 at 109.108 kb on - strand, within Ac3H11_986 at 109.243 kb on + strand, within Ac3H11_986 at 109.243 kb on + strand, within Ac3H11_986 at 109.244 kb on - strand, within Ac3H11_986 at 109.244 kb on - strand, within Ac3H11_986 at 109.244 kb on - strand, within Ac3H11_986 at 109.244 kb on - strand, within Ac3H11_986 at 109.244 kb on - strand, within Ac3H11_986 at 109.244 kb on - strand, within Ac3H11_986 at 109.268 kb on + strand, within Ac3H11_986 at 109.268 kb on + strand, within Ac3H11_986 at 109.268 kb on + strand, within Ac3H11_986 at 109.482 kb on + strand, within Ac3H11_986 at 109.483 kb on - strand, within Ac3H11_986 at 109.483 kb on - strand, within Ac3H11_986 at 109.483 kb on - strand, within Ac3H11_986 at 109.596 kb on + strand at 109.596 kb on + strand at 109.597 kb on - strand at 109.597 kb on - strand at 109.597 kb on - strand at 109.597 kb on - strand at 109.597 kb on - strand at 109.661 kb on - strand at 109.661 kb on - strand at 110.052 kb on + strand, within Ac3H11_987 at 110.476 kb on + strand, within Ac3H11_988 at 110.807 kb on - strand, within Ac3H11_988 at 110.830 kb on + strand, within Ac3H11_988 at 110.831 kb on - strand, within Ac3H11_988 at 110.831 kb on - strand, within Ac3H11_988 at 110.831 kb on - strand, within Ac3H11_988
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 109,107 + Ac3H11_986 0.59 +0.7 109,107 + Ac3H11_986 0.59 +0.1 109,107 + Ac3H11_986 0.59 -0.1 109,107 + Ac3H11_986 0.59 +0.7 109,108 - Ac3H11_986 0.59 -0.4 109,108 - Ac3H11_986 0.59 -1.6 109,108 - Ac3H11_986 0.59 +0.6 109,243 + Ac3H11_986 0.69 +1.7 109,243 + Ac3H11_986 0.69 -0.0 109,244 - Ac3H11_986 0.69 -0.4 109,244 - Ac3H11_986 0.69 -0.9 109,244 - Ac3H11_986 0.69 -0.3 109,244 - Ac3H11_986 0.69 +0.0 109,244 - Ac3H11_986 0.69 +0.0 109,244 - Ac3H11_986 0.69 +0.1 109,268 + Ac3H11_986 0.71 -0.4 109,268 + Ac3H11_986 0.71 -0.4 109,268 + Ac3H11_986 0.71 -0.6 109,482 + Ac3H11_986 0.87 -0.0 109,483 - Ac3H11_986 0.87 +0.0 109,483 - Ac3H11_986 0.87 -0.7 109,483 - Ac3H11_986 0.87 +0.8 109,596 + +1.2 109,596 + -0.2 109,597 - +0.3 109,597 - +0.1 109,597 - -1.3 109,597 - +0.3 109,597 - +0.2 109,661 - -0.3 109,661 - +0.8 110,052 + Ac3H11_987 0.66 -0.7 110,476 + Ac3H11_988 0.25 -0.6 110,807 - Ac3H11_988 0.62 +0.5 110,830 + Ac3H11_988 0.64 -1.3 110,831 - Ac3H11_988 0.65 -0.5 110,831 - Ac3H11_988 0.65 -0.4 110,831 - Ac3H11_988 0.65 +0.1
Or see this region's nucleotide sequence