Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_897 and Ac3H11_898 are separated by 358 nucleotides Ac3H11_898 and Ac3H11_899 are separated by 17 nucleotides Ac3H11_899 and Ac3H11_900 are separated by 84 nucleotides
Ac3H11_897 - Beta-lactamase (EC 3.5.2.6), at 6,700 to 8,571
_897
Ac3H11_898 - hypothetical protein, at 8,930 to 9,181
_898
Ac3H11_899 - Cell division protein FtsH (EC 3.4.24.-), at 9,199 to 11,226
_899
Ac3H11_900 - N-acetylglutamate synthase (EC 2.3.1.1), at 11,311 to 12,657
_900
Position (kb)
9
10
11
12 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 8.221 kb on + strand, within Ac3H11_897 at 8.644 kb on + strand at 8.644 kb on + strand at 8.645 kb on - strand at 8.645 kb on - strand at 8.764 kb on + strand at 8.765 kb on - strand at 8.765 kb on - strand at 8.765 kb on - strand at 8.895 kb on - strand at 8.895 kb on - strand at 9.198 kb on + strand at 9.198 kb on + strand at 9.198 kb on + strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.379 kb on + strand at 9.380 kb on - strand at 9.380 kb on - strand at 9.638 kb on + strand, within Ac3H11_899 at 9.638 kb on + strand, within Ac3H11_899 at 9.638 kb on + strand, within Ac3H11_899 at 9.673 kb on + strand, within Ac3H11_899 at 9.766 kb on + strand, within Ac3H11_899 at 9.766 kb on + strand, within Ac3H11_899 at 9.766 kb on + strand, within Ac3H11_899 at 9.767 kb on - strand, within Ac3H11_899 at 9.767 kb on - strand, within Ac3H11_899 at 9.767 kb on - strand, within Ac3H11_899 at 9.833 kb on + strand, within Ac3H11_899 at 9.834 kb on - strand, within Ac3H11_899 at 9.973 kb on + strand, within Ac3H11_899 at 9.973 kb on + strand, within Ac3H11_899 at 9.974 kb on - strand, within Ac3H11_899 at 9.974 kb on - strand, within Ac3H11_899 at 10.018 kb on + strand, within Ac3H11_899 at 10.018 kb on + strand, within Ac3H11_899 at 10.018 kb on + strand, within Ac3H11_899 at 10.019 kb on - strand, within Ac3H11_899 at 10.174 kb on + strand, within Ac3H11_899 at 10.175 kb on - strand, within Ac3H11_899 at 10.175 kb on - strand, within Ac3H11_899 at 10.198 kb on + strand, within Ac3H11_899 at 10.198 kb on + strand, within Ac3H11_899 at 10.199 kb on - strand, within Ac3H11_899 at 10.199 kb on - strand, within Ac3H11_899 at 10.199 kb on - strand, within Ac3H11_899 at 10.232 kb on - strand, within Ac3H11_899 at 10.300 kb on + strand, within Ac3H11_899 at 10.300 kb on + strand, within Ac3H11_899 at 10.300 kb on + strand, within Ac3H11_899 at 10.301 kb on - strand, within Ac3H11_899 at 10.301 kb on - strand, within Ac3H11_899 at 10.301 kb on - strand, within Ac3H11_899 at 10.429 kb on + strand, within Ac3H11_899 at 10.429 kb on + strand, within Ac3H11_899 at 10.429 kb on + strand, within Ac3H11_899 at 10.429 kb on + strand, within Ac3H11_899 at 10.430 kb on - strand, within Ac3H11_899 at 10.430 kb on - strand, within Ac3H11_899 at 10.591 kb on + strand, within Ac3H11_899 at 10.592 kb on - strand, within Ac3H11_899 at 10.592 kb on - strand, within Ac3H11_899 at 10.592 kb on - strand, within Ac3H11_899 at 10.792 kb on + strand, within Ac3H11_899 at 10.792 kb on + strand, within Ac3H11_899 at 10.792 kb on + strand, within Ac3H11_899 at 10.792 kb on + strand, within Ac3H11_899 at 10.823 kb on - strand, within Ac3H11_899 at 11.222 kb on + strand at 11.222 kb on + strand at 11.222 kb on + strand at 11.222 kb on + strand at 11.222 kb on + strand at 11.222 kb on + strand at 11.223 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 8,221 + Ac3H11_897 0.81 +1.2 8,644 + +0.5 8,644 + +0.0 8,645 - +0.4 8,645 - -1.1 8,764 + +0.8 8,765 - -0.1 8,765 - -0.3 8,765 - +0.5 8,895 - -0.9 8,895 - +0.7 9,198 + +0.5 9,198 + +0.0 9,198 + +0.5 9,199 - -0.2 9,199 - +1.2 9,199 - -0.2 9,199 - -0.6 9,379 + +0.8 9,380 - -1.5 9,380 - +0.5 9,638 + Ac3H11_899 0.22 -0.7 9,638 + Ac3H11_899 0.22 -0.4 9,638 + Ac3H11_899 0.22 +0.4 9,673 + Ac3H11_899 0.23 +0.4 9,766 + Ac3H11_899 0.28 -0.0 9,766 + Ac3H11_899 0.28 +1.7 9,766 + Ac3H11_899 0.28 +1.0 9,767 - Ac3H11_899 0.28 -0.2 9,767 - Ac3H11_899 0.28 -1.6 9,767 - Ac3H11_899 0.28 +1.5 9,833 + Ac3H11_899 0.31 -0.7 9,834 - Ac3H11_899 0.31 -0.3 9,973 + Ac3H11_899 0.38 -0.3 9,973 + Ac3H11_899 0.38 -0.1 9,974 - Ac3H11_899 0.38 +0.6 9,974 - Ac3H11_899 0.38 -0.5 10,018 + Ac3H11_899 0.40 -0.8 10,018 + Ac3H11_899 0.40 +0.3 10,018 + Ac3H11_899 0.40 -1.0 10,019 - Ac3H11_899 0.40 -0.2 10,174 + Ac3H11_899 0.48 -0.8 10,175 - Ac3H11_899 0.48 +0.3 10,175 - Ac3H11_899 0.48 +0.5 10,198 + Ac3H11_899 0.49 +0.2 10,198 + Ac3H11_899 0.49 +4.9 10,199 - Ac3H11_899 0.49 -0.3 10,199 - Ac3H11_899 0.49 -1.1 10,199 - Ac3H11_899 0.49 -0.5 10,232 - Ac3H11_899 0.51 +0.4 10,300 + Ac3H11_899 0.54 -0.5 10,300 + Ac3H11_899 0.54 -0.8 10,300 + Ac3H11_899 0.54 -0.6 10,301 - Ac3H11_899 0.54 +0.7 10,301 - Ac3H11_899 0.54 -0.3 10,301 - Ac3H11_899 0.54 +0.4 10,429 + Ac3H11_899 0.61 -0.1 10,429 + Ac3H11_899 0.61 +2.1 10,429 + Ac3H11_899 0.61 -0.0 10,429 + Ac3H11_899 0.61 -0.1 10,430 - Ac3H11_899 0.61 -0.6 10,430 - Ac3H11_899 0.61 +0.5 10,591 + Ac3H11_899 0.69 +0.3 10,592 - Ac3H11_899 0.69 +1.6 10,592 - Ac3H11_899 0.69 +0.8 10,592 - Ac3H11_899 0.69 +0.0 10,792 + Ac3H11_899 0.79 +0.2 10,792 + Ac3H11_899 0.79 +1.1 10,792 + Ac3H11_899 0.79 +0.0 10,792 + Ac3H11_899 0.79 +0.9 10,823 - Ac3H11_899 0.80 +1.0 11,222 + -0.7 11,222 + -0.0 11,222 + -0.7 11,222 + +0.5 11,222 + +0.7 11,222 + -0.6 11,223 - -0.3
Or see this region's nucleotide sequence