Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_187 and Ac3H11_188 are separated by 41 nucleotides
Ac3H11_187 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 77,647 to 78,045
_187
Ac3H11_188 - Methyl-accepting chemotaxis protein, at 78,087 to 79,448
_188
Position (kb) 77
78
79 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 76.744 kb on + strand at 76.744 kb on + strand at 76.745 kb on - strand at 76.745 kb on - strand at 76.824 kb on - strand at 76.884 kb on + strand at 76.885 kb on - strand at 76.980 kb on - strand at 77.013 kb on + strand at 77.013 kb on + strand at 77.072 kb on - strand at 77.072 kb on - strand at 77.079 kb on + strand at 77.079 kb on + strand at 77.080 kb on - strand at 77.114 kb on + strand at 77.114 kb on + strand at 77.115 kb on - strand at 77.115 kb on - strand at 77.115 kb on - strand at 77.182 kb on + strand at 77.182 kb on + strand at 77.182 kb on + strand at 77.182 kb on + strand at 77.182 kb on + strand at 77.182 kb on + strand at 77.182 kb on + strand at 77.182 kb on + strand at 77.183 kb on - strand at 77.183 kb on - strand at 77.183 kb on - strand at 77.183 kb on - strand at 77.183 kb on - strand at 77.183 kb on - strand at 77.184 kb on + strand at 77.184 kb on + strand at 77.184 kb on + strand at 77.184 kb on + strand at 77.184 kb on + strand at 77.184 kb on + strand at 77.184 kb on + strand at 77.184 kb on + strand at 77.185 kb on - strand at 77.185 kb on - strand at 77.185 kb on - strand at 77.190 kb on + strand at 77.190 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.279 kb on + strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.280 kb on - strand at 77.313 kb on + strand at 77.314 kb on - strand at 77.427 kb on - strand at 77.434 kb on + strand at 77.434 kb on + strand at 77.435 kb on - strand at 77.435 kb on - strand at 77.582 kb on + strand at 78.043 kb on + strand at 78.043 kb on + strand at 78.043 kb on + strand at 78.044 kb on - strand at 78.044 kb on - strand at 78.044 kb on - strand at 78.044 kb on - strand at 78.107 kb on + strand at 78.108 kb on - strand at 78.108 kb on - strand at 78.117 kb on + strand at 78.156 kb on + strand at 78.156 kb on + strand at 78.156 kb on + strand at 78.156 kb on + strand at 78.156 kb on + strand at 78.156 kb on + strand at 78.156 kb on + strand at 78.157 kb on - strand at 78.157 kb on - strand at 78.157 kb on - strand at 78.157 kb on - strand at 78.158 kb on + strand at 78.158 kb on + strand at 78.166 kb on + strand at 78.321 kb on + strand, within Ac3H11_188 at 78.321 kb on + strand, within Ac3H11_188 at 78.321 kb on + strand, within Ac3H11_188 at 78.321 kb on + strand, within Ac3H11_188 at 78.321 kb on + strand, within Ac3H11_188 at 78.322 kb on - strand, within Ac3H11_188 at 78.322 kb on - strand, within Ac3H11_188 at 78.322 kb on - strand, within Ac3H11_188 at 78.322 kb on - strand, within Ac3H11_188 at 78.322 kb on - strand, within Ac3H11_188 at 78.322 kb on - strand, within Ac3H11_188 at 78.322 kb on - strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.325 kb on + strand, within Ac3H11_188 at 78.326 kb on - strand, within Ac3H11_188 at 78.326 kb on - strand, within Ac3H11_188 at 78.326 kb on - strand, within Ac3H11_188 at 78.326 kb on - strand, within Ac3H11_188 at 78.326 kb on - strand, within Ac3H11_188 at 78.326 kb on - strand, within Ac3H11_188 at 78.326 kb on - strand, within Ac3H11_188 at 78.326 kb on - strand, within Ac3H11_188 at 78.372 kb on + strand, within Ac3H11_188 at 78.372 kb on + strand, within Ac3H11_188 at 78.372 kb on + strand, within Ac3H11_188 at 78.373 kb on - strand, within Ac3H11_188 at 78.395 kb on + strand, within Ac3H11_188 at 78.395 kb on + strand, within Ac3H11_188 at 78.395 kb on + strand, within Ac3H11_188 at 78.395 kb on + strand, within Ac3H11_188 at 78.396 kb on - strand, within Ac3H11_188 at 78.396 kb on - strand, within Ac3H11_188 at 78.409 kb on + strand, within Ac3H11_188 at 78.409 kb on + strand, within Ac3H11_188 at 78.409 kb on + strand, within Ac3H11_188 at 78.409 kb on + strand, within Ac3H11_188 at 78.409 kb on + strand, within Ac3H11_188 at 78.410 kb on - strand, within Ac3H11_188 at 78.410 kb on - strand, within Ac3H11_188 at 78.410 kb on - strand, within Ac3H11_188 at 78.410 kb on - strand, within Ac3H11_188 at 78.420 kb on + strand, within Ac3H11_188 at 78.420 kb on + strand, within Ac3H11_188 at 78.420 kb on + strand, within Ac3H11_188 at 78.421 kb on - strand, within Ac3H11_188 at 78.421 kb on - strand, within Ac3H11_188 at 78.421 kb on - strand, within Ac3H11_188 at 78.479 kb on + strand, within Ac3H11_188 at 78.504 kb on - strand, within Ac3H11_188 at 78.615 kb on + strand, within Ac3H11_188 at 78.617 kb on + strand, within Ac3H11_188 at 78.617 kb on + strand, within Ac3H11_188 at 78.617 kb on + strand, within Ac3H11_188 at 78.617 kb on + strand, within Ac3H11_188 at 78.618 kb on - strand, within Ac3H11_188 at 78.618 kb on - strand, within Ac3H11_188 at 78.618 kb on - strand, within Ac3H11_188 at 78.631 kb on + strand, within Ac3H11_188 at 78.631 kb on + strand, within Ac3H11_188 at 78.631 kb on + strand, within Ac3H11_188 at 78.631 kb on + strand, within Ac3H11_188 at 78.631 kb on + strand, within Ac3H11_188 at 78.670 kb on + strand, within Ac3H11_188 at 78.670 kb on + strand, within Ac3H11_188 at 78.671 kb on - strand, within Ac3H11_188 at 78.738 kb on + strand, within Ac3H11_188 at 78.738 kb on + strand, within Ac3H11_188 at 78.738 kb on + strand, within Ac3H11_188 at 78.738 kb on + strand, within Ac3H11_188 at 78.739 kb on - strand, within Ac3H11_188 at 78.739 kb on - strand, within Ac3H11_188 at 78.752 kb on + strand, within Ac3H11_188 at 78.752 kb on + strand, within Ac3H11_188 at 78.753 kb on - strand, within Ac3H11_188 at 78.776 kb on - strand, within Ac3H11_188 at 78.786 kb on + strand, within Ac3H11_188 at 78.786 kb on + strand, within Ac3H11_188 at 78.787 kb on - strand, within Ac3H11_188 at 78.787 kb on - strand, within Ac3H11_188 at 78.787 kb on - strand, within Ac3H11_188 at 78.787 kb on - strand, within Ac3H11_188 at 78.787 kb on - strand, within Ac3H11_188 at 78.812 kb on + strand, within Ac3H11_188 at 78.819 kb on + strand, within Ac3H11_188 at 78.819 kb on + strand, within Ac3H11_188 at 78.820 kb on - strand, within Ac3H11_188 at 78.820 kb on - strand, within Ac3H11_188 at 78.898 kb on + strand, within Ac3H11_188 at 78.910 kb on + strand, within Ac3H11_188 at 78.947 kb on + strand, within Ac3H11_188 at 78.947 kb on + strand, within Ac3H11_188 at 78.947 kb on + strand, within Ac3H11_188 at 78.948 kb on - strand, within Ac3H11_188 at 78.948 kb on - strand, within Ac3H11_188 at 78.948 kb on - strand, within Ac3H11_188 at 78.948 kb on - strand, within Ac3H11_188 at 78.964 kb on + strand, within Ac3H11_188 at 79.016 kb on - strand, within Ac3H11_188 at 79.034 kb on + strand, within Ac3H11_188 at 79.035 kb on - strand, within Ac3H11_188 at 79.035 kb on - strand, within Ac3H11_188
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 76,744 + +0.3 76,744 + +0.6 76,745 - +0.5 76,745 - +0.6 76,824 - +0.6 76,884 + +1.5 76,885 - -0.8 76,980 - -0.7 77,013 + -0.6 77,013 + -0.1 77,072 - -0.7 77,072 - +0.4 77,079 + +0.2 77,079 + +0.1 77,080 - -0.6 77,114 + +0.9 77,114 + +0.6 77,115 - +0.3 77,115 - -0.1 77,115 - -1.5 77,182 + +2.6 77,182 + +0.9 77,182 + +1.3 77,182 + +0.9 77,182 + -1.4 77,182 + -0.8 77,182 + +0.1 77,182 + +0.9 77,183 - +0.3 77,183 - +2.4 77,183 - -1.4 77,183 - +1.0 77,183 - +0.2 77,183 - -0.3 77,184 + -0.7 77,184 + -0.9 77,184 + -1.6 77,184 + -0.4 77,184 + +0.9 77,184 + +1.7 77,184 + -0.4 77,184 + +0.1 77,185 - -0.2 77,185 - +0.2 77,185 - +2.6 77,190 + -0.9 77,190 + +0.4 77,279 + -0.0 77,279 + +0.3 77,279 + -0.5 77,279 + +1.6 77,279 + +0.2 77,279 + +1.6 77,279 + +0.2 77,279 + -1.0 77,279 + +0.3 77,279 + +0.6 77,280 - +0.1 77,280 - +0.5 77,280 - +1.5 77,280 - +1.0 77,280 - -0.4 77,280 - +0.6 77,280 - -0.3 77,280 - +0.3 77,280 - +1.0 77,280 - +0.5 77,280 - +1.1 77,280 - +0.6 77,280 - +2.6 77,280 - -1.5 77,280 - +0.4 77,280 - -0.4 77,280 - +0.3 77,280 - +0.1 77,313 + +1.0 77,314 - +0.5 77,427 - +0.6 77,434 + +0.6 77,434 + -0.6 77,435 - -1.2 77,435 - +0.3 77,582 + -0.4 78,043 + -1.9 78,043 + -1.6 78,043 + +0.6 78,044 - -0.4 78,044 - -0.9 78,044 - +1.1 78,044 - -1.0 78,107 + -1.5 78,108 - -0.8 78,108 - +0.2 78,117 + +0.1 78,156 + +0.3 78,156 + -0.1 78,156 + -1.2 78,156 + -1.3 78,156 + +0.1 78,156 + +1.2 78,156 + +0.1 78,157 - +3.2 78,157 - +0.3 78,157 - -0.1 78,157 - +0.3 78,158 + -1.2 78,158 + -0.5 78,166 + -0.7 78,321 + Ac3H11_188 0.17 +0.1 78,321 + Ac3H11_188 0.17 +0.2 78,321 + Ac3H11_188 0.17 +1.3 78,321 + Ac3H11_188 0.17 -1.3 78,321 + Ac3H11_188 0.17 +0.9 78,322 - Ac3H11_188 0.17 -2.3 78,322 - Ac3H11_188 0.17 -2.9 78,322 - Ac3H11_188 0.17 +0.3 78,322 - Ac3H11_188 0.17 -0.7 78,322 - Ac3H11_188 0.17 -0.1 78,322 - Ac3H11_188 0.17 +1.1 78,322 - Ac3H11_188 0.17 +0.1 78,325 + Ac3H11_188 0.17 -2.3 78,325 + Ac3H11_188 0.17 +1.1 78,325 + Ac3H11_188 0.17 +0.6 78,325 + Ac3H11_188 0.17 +0.4 78,325 + Ac3H11_188 0.17 +0.9 78,325 + Ac3H11_188 0.17 -0.5 78,325 + Ac3H11_188 0.17 -0.0 78,325 + Ac3H11_188 0.17 -1.4 78,325 + Ac3H11_188 0.17 +0.8 78,326 - Ac3H11_188 0.18 +2.1 78,326 - Ac3H11_188 0.18 +2.2 78,326 - Ac3H11_188 0.18 +0.9 78,326 - Ac3H11_188 0.18 -0.7 78,326 - Ac3H11_188 0.18 -0.0 78,326 - Ac3H11_188 0.18 +1.6 78,326 - Ac3H11_188 0.18 -1.5 78,326 - Ac3H11_188 0.18 +0.8 78,372 + Ac3H11_188 0.21 +0.1 78,372 + Ac3H11_188 0.21 -1.4 78,372 + Ac3H11_188 0.21 -0.5 78,373 - Ac3H11_188 0.21 +0.4 78,395 + Ac3H11_188 0.23 +0.5 78,395 + Ac3H11_188 0.23 -0.6 78,395 + Ac3H11_188 0.23 -0.7 78,395 + Ac3H11_188 0.23 +0.3 78,396 - Ac3H11_188 0.23 -0.9 78,396 - Ac3H11_188 0.23 -0.9 78,409 + Ac3H11_188 0.24 -0.7 78,409 + Ac3H11_188 0.24 -0.3 78,409 + Ac3H11_188 0.24 -0.4 78,409 + Ac3H11_188 0.24 +0.1 78,409 + Ac3H11_188 0.24 +0.0 78,410 - Ac3H11_188 0.24 -1.3 78,410 - Ac3H11_188 0.24 -0.5 78,410 - Ac3H11_188 0.24 +0.6 78,410 - Ac3H11_188 0.24 -0.0 78,420 + Ac3H11_188 0.24 -0.2 78,420 + Ac3H11_188 0.24 +0.4 78,420 + Ac3H11_188 0.24 -0.2 78,421 - Ac3H11_188 0.25 +0.6 78,421 - Ac3H11_188 0.25 -0.9 78,421 - Ac3H11_188 0.25 +0.1 78,479 + Ac3H11_188 0.29 -0.9 78,504 - Ac3H11_188 0.31 +2.0 78,615 + Ac3H11_188 0.39 +1.2 78,617 + Ac3H11_188 0.39 -0.1 78,617 + Ac3H11_188 0.39 +0.3 78,617 + Ac3H11_188 0.39 -0.5 78,617 + Ac3H11_188 0.39 +0.9 78,618 - Ac3H11_188 0.39 +1.9 78,618 - Ac3H11_188 0.39 +0.1 78,618 - Ac3H11_188 0.39 +1.5 78,631 + Ac3H11_188 0.40 -0.6 78,631 + Ac3H11_188 0.40 -1.3 78,631 + Ac3H11_188 0.40 -0.2 78,631 + Ac3H11_188 0.40 +0.6 78,631 + Ac3H11_188 0.40 -1.0 78,670 + Ac3H11_188 0.43 -1.2 78,670 + Ac3H11_188 0.43 +0.3 78,671 - Ac3H11_188 0.43 -0.4 78,738 + Ac3H11_188 0.48 -0.8 78,738 + Ac3H11_188 0.48 +1.7 78,738 + Ac3H11_188 0.48 +0.8 78,738 + Ac3H11_188 0.48 +1.6 78,739 - Ac3H11_188 0.48 +0.0 78,739 - Ac3H11_188 0.48 -0.8 78,752 + Ac3H11_188 0.49 +0.2 78,752 + Ac3H11_188 0.49 +0.3 78,753 - Ac3H11_188 0.49 +0.6 78,776 - Ac3H11_188 0.51 +3.4 78,786 + Ac3H11_188 0.51 -1.2 78,786 + Ac3H11_188 0.51 +0.5 78,787 - Ac3H11_188 0.51 +3.6 78,787 - Ac3H11_188 0.51 +0.2 78,787 - Ac3H11_188 0.51 -0.4 78,787 - Ac3H11_188 0.51 -0.8 78,787 - Ac3H11_188 0.51 -0.4 78,812 + Ac3H11_188 0.53 -0.4 78,819 + Ac3H11_188 0.54 +0.4 78,819 + Ac3H11_188 0.54 +0.6 78,820 - Ac3H11_188 0.54 +1.0 78,820 - Ac3H11_188 0.54 -0.3 78,898 + Ac3H11_188 0.60 -0.2 78,910 + Ac3H11_188 0.60 +0.8 78,947 + Ac3H11_188 0.63 +1.5 78,947 + Ac3H11_188 0.63 +0.2 78,947 + Ac3H11_188 0.63 +0.2 78,948 - Ac3H11_188 0.63 -0.8 78,948 - Ac3H11_188 0.63 +0.6 78,948 - Ac3H11_188 0.63 -0.8 78,948 - Ac3H11_188 0.63 -0.4 78,964 + Ac3H11_188 0.64 -0.4 79,016 - Ac3H11_188 0.68 +1.1 79,034 + Ac3H11_188 0.70 +0.6 79,035 - Ac3H11_188 0.70 -0.4 79,035 - Ac3H11_188 0.70 +0.9
Or see this region's nucleotide sequence