Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03490

Experiment: Glycine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03480 and AO353_03485 are separated by 57 nucleotidesAO353_03485 and AO353_03490 are separated by 182 nucleotidesAO353_03490 and AO353_03495 are separated by 495 nucleotidesAO353_03495 and AO353_03500 are separated by 9 nucleotides AO353_03480: AO353_03480 - carbamate kinase, at 744,313 to 745,242 _03480 AO353_03485: AO353_03485 - acetyl-CoA carboxylase, at 745,300 to 745,656 _03485 AO353_03490: AO353_03490 - Fis family transcriptional regulator, at 745,839 to 747,347 _03490 AO353_03495: AO353_03495 - glycine cleavage system protein H, at 747,843 to 748,226 _03495 AO353_03500: AO353_03500 - Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data), at 748,236 to 751,088 _03500 Position (kb) 745 746 747 748Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 745.227 kb on + strandat 745.234 kb on + strandat 745.234 kb on + strandat 745.234 kb on + strandat 745.235 kb on - strandat 745.235 kb on - strandat 745.235 kb on - strandat 745.235 kb on - strandat 745.235 kb on - strandat 745.241 kb on - strandat 745.241 kb on - strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.366 kb on + strand, within AO353_03485at 745.366 kb on + strand, within AO353_03485at 745.367 kb on - strand, within AO353_03485at 745.367 kb on - strand, within AO353_03485at 745.367 kb on - strand, within AO353_03485at 745.367 kb on - strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.535 kb on - strand, within AO353_03485at 745.535 kb on - strand, within AO353_03485at 745.535 kb on - strand, within AO353_03485at 745.535 kb on - strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.580 kb on - strand, within AO353_03485at 745.580 kb on - strand, within AO353_03485at 745.580 kb on - strand, within AO353_03485at 745.580 kb on - strand, within AO353_03485at 745.601 kb on + strand, within AO353_03485at 745.601 kb on + strand, within AO353_03485at 745.601 kb on + strand, within AO353_03485at 745.601 kb on + strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.654 kb on + strandat 745.654 kb on + strandat 745.654 kb on + strandat 745.654 kb on + strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.657 kb on + strandat 745.657 kb on + strandat 745.658 kb on - strandat 745.658 kb on - strandat 745.709 kb on + strandat 745.709 kb on + strandat 745.710 kb on - strandat 745.710 kb on - strandat 745.710 kb on - strandat 745.710 kb on - strandat 745.717 kb on - strandat 745.717 kb on - strandat 745.717 kb on - strandat 745.717 kb on - strandat 745.755 kb on + strandat 745.755 kb on + strandat 745.766 kb on + strandat 745.766 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.953 kb on + strandat 745.953 kb on + strandat 745.954 kb on - strandat 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.346 kb on + strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.347 kb on - strand, within AO353_03490at 746.447 kb on - strand, within AO353_03490at 746.739 kb on + strand, within AO353_03490at 746.739 kb on + strand, within AO353_03490at 746.739 kb on + strand, within AO353_03490at 746.739 kb on + strand, within AO353_03490at 746.739 kb on + strand, within AO353_03490at 746.740 kb on - strand, within AO353_03490at 746.895 kb on + strand, within AO353_03490at 746.896 kb on - strand, within AO353_03490at 746.962 kb on + strand, within AO353_03490at 746.970 kb on + strand, within AO353_03490at 746.970 kb on + strand, within AO353_03490at 746.970 kb on + strand, within AO353_03490at 747.033 kb on + strand, within AO353_03490at 747.243 kb on + strandat 747.244 kb on - strandat 747.244 kb on - strandat 747.252 kb on + strandat 747.252 kb on + strandat 747.252 kb on + strandat 747.252 kb on + strandat 747.252 kb on + strandat 747.253 kb on - strandat 747.253 kb on - strandat 747.324 kb on + strandat 747.324 kb on + strandat 747.325 kb on - strandat 747.418 kb on + strandat 747.437 kb on + strandat 747.437 kb on + strandat 747.437 kb on + strandat 747.437 kb on + strandat 747.438 kb on - strandat 747.438 kb on - strandat 747.438 kb on - strandat 747.438 kb on - strandat 747.600 kb on - strandat 747.631 kb on - strandat 747.668 kb on + strandat 747.710 kb on - strandat 747.751 kb on + strandat 747.752 kb on - strandat 747.752 kb on - strandat 747.832 kb on + strandat 747.833 kb on - strandat 747.833 kb on - strandat 747.861 kb on - strandat 747.958 kb on + strand, within AO353_03495at 747.959 kb on - strand, within AO353_03495at 747.981 kb on + strand, within AO353_03495at 748.038 kb on + strand, within AO353_03495at 748.038 kb on + strand, within AO353_03495at 748.038 kb on + strand, within AO353_03495at 748.038 kb on + strand, within AO353_03495at 748.038 kb on + strand, within AO353_03495at 748.039 kb on - strand, within AO353_03495at 748.039 kb on - strand, within AO353_03495at 748.039 kb on - strand, within AO353_03495at 748.039 kb on - strand, within AO353_03495at 748.039 kb on - strand, within AO353_03495at 748.039 kb on - strand, within AO353_03495at 748.039 kb on - strand, within AO353_03495at 748.192 kb on - strandat 748.246 kb on + strandat 748.246 kb on + strandat 748.246 kb on + strandat 748.246 kb on + strandat 748.246 kb on + strandat 748.247 kb on - strandat 748.247 kb on - strandat 748.247 kb on - strandat 748.247 kb on - strandat 748.252 kb on + strandat 748.252 kb on + strandat 748.252 kb on + strandat 748.252 kb on + strandat 748.252 kb on + strandat 748.252 kb on + strandat 748.253 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycine (N)
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744,883 + AO353_03480 0.61 +0.2
744,883 + AO353_03480 0.61 +0.1
744,883 + AO353_03480 0.61 -2.6
744,883 + AO353_03480 0.61 +0.3
744,883 + AO353_03480 0.61 +0.9
744,883 + AO353_03480 0.61 +1.0
744,884 - AO353_03480 0.61 -0.3
744,884 - AO353_03480 0.61 -0.1
744,884 - AO353_03480 0.61 +0.2
744,884 - AO353_03480 0.61 -0.1
744,884 - AO353_03480 0.61 -0.7
744,884 - AO353_03480 0.61 +0.2
745,227 + -1.4
745,234 + -0.1
745,234 + +1.6
745,234 + +0.0
745,235 - +0.0
745,235 - -0.8
745,235 - +1.2
745,235 - +0.9
745,235 - -0.6
745,241 - -1.3
745,241 - -0.7
745,307 + +0.2
745,307 + -0.2
745,307 + -0.8
745,307 + +1.3
745,307 + -0.1
745,307 + +0.6
745,307 + -1.5
745,307 + +0.3
745,308 - +0.2
745,308 - -1.1
745,308 - +0.4
745,308 - +1.4
745,308 - -0.9
745,308 - +1.0
745,366 + AO353_03485 0.18 +1.4
745,366 + AO353_03485 0.18 -0.5
745,367 - AO353_03485 0.19 +0.8
745,367 - AO353_03485 0.19 +1.0
745,367 - AO353_03485 0.19 +0.2
745,367 - AO353_03485 0.19 +0.4
745,413 + AO353_03485 0.32 +0.2
745,413 + AO353_03485 0.32 -0.7
745,413 + AO353_03485 0.32 -0.4
745,413 + AO353_03485 0.32 +0.6
745,413 + AO353_03485 0.32 -1.2
745,413 + AO353_03485 0.32 -1.0
745,413 + AO353_03485 0.32 +0.8
745,413 + AO353_03485 0.32 +0.8
745,414 - AO353_03485 0.32 -1.2
745,414 - AO353_03485 0.32 -0.2
745,414 - AO353_03485 0.32 +2.1
745,414 - AO353_03485 0.32 -0.5
745,414 - AO353_03485 0.32 +0.9
745,414 - AO353_03485 0.32 -0.5
745,414 - AO353_03485 0.32 +0.8
745,414 - AO353_03485 0.32 +0.2
745,414 - AO353_03485 0.32 +0.6
745,415 + AO353_03485 0.32 +0.8
745,415 + AO353_03485 0.32 +0.9
745,415 + AO353_03485 0.32 +0.0
745,415 + AO353_03485 0.32 +1.1
745,415 + AO353_03485 0.32 -0.0
745,415 + AO353_03485 0.32 +1.3
745,415 + AO353_03485 0.32 +0.6
745,415 + AO353_03485 0.32 +1.6
745,415 + AO353_03485 0.32 +0.6
745,415 + AO353_03485 0.32 +1.4
745,415 + AO353_03485 0.32 +0.5
745,415 + AO353_03485 0.32 +0.2
745,415 + AO353_03485 0.32 -2.0
745,415 + AO353_03485 0.32 +0.7
745,415 + AO353_03485 0.32 -0.5
745,415 + AO353_03485 0.32 +0.7
745,415 + AO353_03485 0.32 +0.2
745,415 + AO353_03485 0.32 +1.2
745,415 + AO353_03485 0.32 +0.2
745,416 - AO353_03485 0.32 -0.0
745,416 - AO353_03485 0.32 +0.1
745,416 - AO353_03485 0.32 -0.2
745,416 - AO353_03485 0.32 -0.3
745,416 - AO353_03485 0.32 +0.3
745,416 - AO353_03485 0.32 +0.8
745,416 - AO353_03485 0.32 +0.2
745,416 - AO353_03485 0.32 +0.6
745,416 - AO353_03485 0.32 -0.3
745,416 - AO353_03485 0.32 +1.5
745,416 - AO353_03485 0.32 +0.2
745,416 - AO353_03485 0.32 -0.2
745,416 - AO353_03485 0.32 +1.1
745,416 - AO353_03485 0.32 -2.7
745,416 - AO353_03485 0.32 +0.5
745,416 - AO353_03485 0.32 -0.5
745,534 + AO353_03485 0.66 -0.2
745,534 + AO353_03485 0.66 -0.6
745,534 + AO353_03485 0.66 -0.5
745,534 + AO353_03485 0.66 -2.3
745,534 + AO353_03485 0.66 -0.1
745,535 - AO353_03485 0.66 -1.7
745,535 - AO353_03485 0.66 -0.2
745,535 - AO353_03485 0.66 +0.3
745,535 - AO353_03485 0.66 -0.8
745,576 + AO353_03485 0.77 +1.9
745,576 + AO353_03485 0.77 -0.4
745,576 + AO353_03485 0.77 -1.9
745,576 + AO353_03485 0.77 +2.6
745,576 + AO353_03485 0.77 -1.0
745,576 + AO353_03485 0.77 +0.5
745,577 - AO353_03485 0.78 +0.2
745,577 - AO353_03485 0.78 -0.4
745,577 - AO353_03485 0.78 -1.7
745,577 - AO353_03485 0.78 +1.4
745,577 - AO353_03485 0.78 -0.7
745,579 + AO353_03485 0.78 +1.4
745,579 + AO353_03485 0.78 +0.0
745,579 + AO353_03485 0.78 +0.8
745,579 + AO353_03485 0.78 +1.1
745,579 + AO353_03485 0.78 +0.0
745,579 + AO353_03485 0.78 +1.3
745,579 + AO353_03485 0.78 -1.8
745,580 - AO353_03485 0.78 -0.5
745,580 - AO353_03485 0.78 +0.2
745,580 - AO353_03485 0.78 +0.5
745,580 - AO353_03485 0.78 -1.7
745,601 + AO353_03485 0.84 -0.9
745,601 + AO353_03485 0.84 +0.4
745,601 + AO353_03485 0.84 +1.4
745,601 + AO353_03485 0.84 -0.4
745,602 - AO353_03485 0.85 +0.5
745,602 - AO353_03485 0.85 +0.6
745,602 - AO353_03485 0.85 -0.0
745,602 - AO353_03485 0.85 -0.0
745,602 - AO353_03485 0.85 -0.4
745,654 + +0.6
745,654 + -1.1
745,654 + +0.2
745,654 + +1.4
745,655 - +0.5
745,655 - +1.2
745,655 - -1.0
745,655 - -1.5
745,655 - -0.3
745,655 - -0.4
745,655 - +0.3
745,655 - +0.3
745,655 - +1.6
745,657 + -1.4
745,657 + +1.1
745,658 - +0.3
745,658 - +1.2
745,709 + -0.4
745,709 + +0.2
745,710 - -0.1
745,710 - -0.1
745,710 - -0.3
745,710 - -0.9
745,717 - -0.8
745,717 - +0.0
745,717 - +0.0
745,717 - -0.5
745,755 + +1.1
745,755 + +0.5
745,766 + -0.7
745,766 + +0.1
745,799 + -0.8
745,799 + -1.5
745,799 + -0.8
745,799 + -1.0
745,799 + +0.3
745,799 + -0.4
745,799 + +0.4
745,800 - -2.5
745,800 - -1.0
745,800 - -1.7
745,800 - +1.2
745,800 - -0.4
745,800 - -0.7
745,800 - -3.0
745,800 - -0.5
745,953 + -1.2
745,953 + -2.5
745,954 - -3.1
746,172 + AO353_03490 0.22 -3.4
746,172 + AO353_03490 0.22 -1.9
746,172 + AO353_03490 0.22 -2.5
746,172 + AO353_03490 0.22 -2.6
746,172 + AO353_03490 0.22 -1.5
746,172 + AO353_03490 0.22 -3.3
746,346 + AO353_03490 0.34 -0.7
746,346 + AO353_03490 0.34 -1.4
746,346 + AO353_03490 0.34 -0.6
746,346 + AO353_03490 0.34 -1.5
746,346 + AO353_03490 0.34 -2.3
746,346 + AO353_03490 0.34 -2.4
746,346 + AO353_03490 0.34 -1.7
746,346 + AO353_03490 0.34 -1.0
746,346 + AO353_03490 0.34 -0.7
746,346 + AO353_03490 0.34 -1.2
746,347 - AO353_03490 0.34 -2.4
746,347 - AO353_03490 0.34 -1.2
746,347 - AO353_03490 0.34 -0.8
746,347 - AO353_03490 0.34 -0.2
746,347 - AO353_03490 0.34 -2.5
746,347 - AO353_03490 0.34 -2.6
746,347 - AO353_03490 0.34 -1.2
746,347 - AO353_03490 0.34 -1.9
746,347 - AO353_03490 0.34 -0.8
746,347 - AO353_03490 0.34 -1.8
746,447 - AO353_03490 0.40 -0.8
746,739 + AO353_03490 0.60 -0.8
746,739 + AO353_03490 0.60 -1.7
746,739 + AO353_03490 0.60 -0.2
746,739 + AO353_03490 0.60 -1.1
746,739 + AO353_03490 0.60 -2.9
746,740 - AO353_03490 0.60 -3.5
746,895 + AO353_03490 0.70 -2.9
746,896 - AO353_03490 0.70 -2.1
746,962 + AO353_03490 0.74 -1.5
746,970 + AO353_03490 0.75 +0.4
746,970 + AO353_03490 0.75 -3.1
746,970 + AO353_03490 0.75 -2.9
747,033 + AO353_03490 0.79 -1.9
747,243 + -2.5
747,244 - -1.2
747,244 - -2.2
747,252 + -1.4
747,252 + -0.5
747,252 + -2.4
747,252 + -0.2
747,252 + -1.4
747,253 - -2.1
747,253 - -2.7
747,324 + -0.1
747,324 + -0.1
747,325 - -1.8
747,418 + -2.0
747,437 + +0.5
747,437 + +1.0
747,437 + -1.8
747,437 + +0.0
747,438 - -1.2
747,438 - +0.6
747,438 - -0.1
747,438 - -1.1
747,600 - -0.8
747,631 - -1.0
747,668 + -1.5
747,710 - +0.1
747,751 + -1.7
747,752 - -1.8
747,752 - -1.7
747,832 + -2.3
747,833 - -2.7
747,833 - -0.1
747,861 - -3.5
747,958 + AO353_03495 0.30 -0.8
747,959 - AO353_03495 0.30 -1.7
747,981 + AO353_03495 0.36 -1.0
748,038 + AO353_03495 0.51 -2.5
748,038 + AO353_03495 0.51 -0.5
748,038 + AO353_03495 0.51 -3.5
748,038 + AO353_03495 0.51 -2.2
748,038 + AO353_03495 0.51 -2.1
748,039 - AO353_03495 0.51 +0.4
748,039 - AO353_03495 0.51 -1.5
748,039 - AO353_03495 0.51 -1.7
748,039 - AO353_03495 0.51 -1.2
748,039 - AO353_03495 0.51 -3.0
748,039 - AO353_03495 0.51 -1.4
748,039 - AO353_03495 0.51 +0.8
748,192 - -2.7
748,246 + -1.5
748,246 + -1.0
748,246 + -1.8
748,246 + -3.3
748,246 + -1.7
748,247 - +5.4
748,247 - -2.4
748,247 - -1.8
748,247 - -3.5
748,252 + -1.2
748,252 + -1.0
748,252 + -0.5
748,252 + -1.2
748,252 + -0.9
748,252 + -0.8
748,253 - -2.9

Or see this region's nucleotide sequence