Experiment: LB no stress 24 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_452 and Pf6N2E2_453 are separated by 105 nucleotides Pf6N2E2_453 and Pf6N2E2_454 are separated by 379 nucleotides
Pf6N2E2_452 - Rtn protein, at 513,969 to 515,513
_452
Pf6N2E2_453 - LysR family transcriptional regulator STM2281, at 515,619 to 516,482
_453
Pf6N2E2_454 - Mobile element protein, at 516,862 to 518,130
_454
Position (kb) 515
516
517 Strain fitness (log2 ratio) -1
0
1
2 at 514.668 kb on + strand, within Pf6N2E2_452 at 514.685 kb on - strand, within Pf6N2E2_452 at 514.685 kb on - strand, within Pf6N2E2_452 at 514.685 kb on - strand, within Pf6N2E2_452 at 514.831 kb on + strand, within Pf6N2E2_452 at 514.831 kb on + strand, within Pf6N2E2_452 at 514.866 kb on + strand, within Pf6N2E2_452 at 514.866 kb on + strand, within Pf6N2E2_452 at 514.867 kb on - strand, within Pf6N2E2_452 at 514.867 kb on - strand, within Pf6N2E2_452 at 515.194 kb on + strand, within Pf6N2E2_452 at 515.195 kb on - strand, within Pf6N2E2_452 at 515.195 kb on - strand, within Pf6N2E2_452 at 515.195 kb on - strand, within Pf6N2E2_452 at 515.195 kb on - strand, within Pf6N2E2_452 at 515.195 kb on - strand, within Pf6N2E2_452 at 515.195 kb on - strand, within Pf6N2E2_452 at 515.213 kb on + strand, within Pf6N2E2_452 at 515.214 kb on - strand, within Pf6N2E2_452 at 515.214 kb on - strand, within Pf6N2E2_452 at 515.214 kb on - strand, within Pf6N2E2_452 at 515.214 kb on - strand, within Pf6N2E2_452 at 515.304 kb on + strand, within Pf6N2E2_452 at 515.304 kb on + strand, within Pf6N2E2_452 at 515.304 kb on + strand, within Pf6N2E2_452 at 515.304 kb on + strand, within Pf6N2E2_452 at 515.304 kb on + strand, within Pf6N2E2_452 at 515.304 kb on + strand, within Pf6N2E2_452 at 515.304 kb on + strand, within Pf6N2E2_452 at 515.304 kb on + strand at 515.305 kb on - strand, within Pf6N2E2_452 at 515.305 kb on - strand, within Pf6N2E2_452 at 515.305 kb on - strand, within Pf6N2E2_452 at 515.305 kb on - strand, within Pf6N2E2_452 at 515.305 kb on - strand, within Pf6N2E2_452 at 515.305 kb on - strand, within Pf6N2E2_452 at 515.305 kb on - strand, within Pf6N2E2_452 at 515.305 kb on - strand, within Pf6N2E2_452 at 515.413 kb on + strand at 515.413 kb on + strand at 515.414 kb on - strand at 515.442 kb on + strand at 515.569 kb on + strand at 515.569 kb on + strand at 515.569 kb on + strand at 515.569 kb on + strand at 515.569 kb on + strand at 515.569 kb on + strand at 515.570 kb on - strand at 515.570 kb on - strand at 515.972 kb on + strand, within Pf6N2E2_453 at 515.973 kb on - strand, within Pf6N2E2_453 at 516.017 kb on + strand, within Pf6N2E2_453 at 516.508 kb on + strand at 516.606 kb on - strand at 516.606 kb on - strand at 516.610 kb on - strand at 516.610 kb on - strand at 516.610 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress 24 hours remove 514,668 + Pf6N2E2_452 0.45 +0.3 514,685 - Pf6N2E2_452 0.46 +0.7 514,685 - Pf6N2E2_452 0.46 -0.0 514,685 - Pf6N2E2_452 0.46 -1.0 514,831 + Pf6N2E2_452 0.56 -0.5 514,831 + Pf6N2E2_452 0.56 +0.2 514,866 + Pf6N2E2_452 0.58 -0.3 514,866 + Pf6N2E2_452 0.58 -1.2 514,867 - Pf6N2E2_452 0.58 -0.5 514,867 - Pf6N2E2_452 0.58 -1.6 515,194 + Pf6N2E2_452 0.79 -0.2 515,195 - Pf6N2E2_452 0.79 -0.0 515,195 - Pf6N2E2_452 0.79 +0.1 515,195 - Pf6N2E2_452 0.79 -0.3 515,195 - Pf6N2E2_452 0.79 -0.7 515,195 - Pf6N2E2_452 0.79 +0.1 515,195 - Pf6N2E2_452 0.79 +1.0 515,213 + Pf6N2E2_452 0.81 -0.0 515,214 - Pf6N2E2_452 0.81 -0.6 515,214 - Pf6N2E2_452 0.81 +0.5 515,214 - Pf6N2E2_452 0.81 +0.5 515,214 - Pf6N2E2_452 0.81 -0.5 515,304 + Pf6N2E2_452 0.86 +0.4 515,304 + Pf6N2E2_452 0.86 -0.5 515,304 + Pf6N2E2_452 0.86 +0.5 515,304 + Pf6N2E2_452 0.86 -0.8 515,304 + Pf6N2E2_452 0.86 +0.8 515,304 + Pf6N2E2_452 0.86 -1.1 515,304 + Pf6N2E2_452 0.86 -0.2 515,304 + +1.5 515,305 - Pf6N2E2_452 0.86 +0.4 515,305 - Pf6N2E2_452 0.86 -0.3 515,305 - Pf6N2E2_452 0.86 -0.5 515,305 - Pf6N2E2_452 0.86 -0.5 515,305 - Pf6N2E2_452 0.86 +0.7 515,305 - Pf6N2E2_452 0.86 -1.6 515,305 - Pf6N2E2_452 0.86 +0.3 515,305 - Pf6N2E2_452 0.86 -0.9 515,413 + -1.4 515,413 + -1.1 515,414 - -0.3 515,442 + -0.4 515,569 + +1.4 515,569 + +1.1 515,569 + -0.5 515,569 + +0.0 515,569 + -0.1 515,569 + +0.7 515,570 - +0.3 515,570 - +0.4 515,972 + Pf6N2E2_453 0.41 -0.7 515,973 - Pf6N2E2_453 0.41 -0.3 516,017 + Pf6N2E2_453 0.46 -1.4 516,508 + -0.6 516,606 - +2.6 516,606 - +0.1 516,610 - -0.7 516,610 - +0.6 516,610 - -1.0
Or see this region's nucleotide sequence