Experiment: LB no stress 24 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1983 and Pf6N2E2_1984 are separated by 8 nucleotides
Pf6N2E2_1983 - hypothetical protein, at 2,349,111 to 2,349,272
_1983
Pf6N2E2_1984 - probable exported protein STY4558, at 2,349,281 to 2,350,000
_1984
Position (kb)
2349
2350 Strain fitness (log2 ratio)
-2
-1
0
1 at 2348.112 kb on - strand at 2348.189 kb on + strand at 2348.189 kb on + strand at 2348.190 kb on - strand at 2348.233 kb on + strand at 2348.234 kb on - strand at 2348.234 kb on - strand at 2348.252 kb on - strand at 2348.371 kb on + strand at 2348.371 kb on + strand at 2348.372 kb on - strand at 2348.372 kb on - strand at 2348.372 kb on - strand at 2348.590 kb on - strand at 2348.629 kb on + strand at 2348.629 kb on + strand at 2348.630 kb on - strand at 2348.630 kb on - strand at 2348.631 kb on + strand at 2348.631 kb on + strand at 2348.632 kb on - strand at 2348.632 kb on - strand at 2348.692 kb on + strand at 2348.693 kb on - strand at 2348.802 kb on - strand at 2348.857 kb on + strand at 2348.940 kb on - strand at 2348.940 kb on - strand at 2348.940 kb on - strand at 2349.136 kb on + strand, within Pf6N2E2_1983 at 2349.137 kb on - strand, within Pf6N2E2_1983 at 2349.187 kb on - strand, within Pf6N2E2_1983 at 2349.187 kb on - strand, within Pf6N2E2_1983 at 2349.187 kb on - strand, within Pf6N2E2_1983 at 2349.281 kb on - strand at 2349.281 kb on - strand at 2349.298 kb on - strand at 2349.494 kb on - strand, within Pf6N2E2_1984 at 2349.497 kb on + strand, within Pf6N2E2_1984 at 2349.497 kb on + strand at 2349.567 kb on - strand, within Pf6N2E2_1984 at 2349.598 kb on - strand, within Pf6N2E2_1984 at 2349.669 kb on + strand, within Pf6N2E2_1984 at 2349.859 kb on + strand, within Pf6N2E2_1984 at 2349.860 kb on - strand, within Pf6N2E2_1984 at 2349.904 kb on + strand, within Pf6N2E2_1984 at 2350.099 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress 24 hours remove 2,348,112 - -0.2 2,348,189 + -0.7 2,348,189 + +1.0 2,348,190 - +1.2 2,348,233 + -1.8 2,348,234 - +0.8 2,348,234 - +0.7 2,348,252 - +0.4 2,348,371 + -0.4 2,348,371 + -0.5 2,348,372 - +1.2 2,348,372 - +0.2 2,348,372 - -0.4 2,348,590 - -0.3 2,348,629 + -0.2 2,348,629 + -0.8 2,348,630 - +0.9 2,348,630 - -0.0 2,348,631 + -0.0 2,348,631 + +0.4 2,348,632 - -0.0 2,348,632 - -0.2 2,348,692 + -0.5 2,348,693 - -1.7 2,348,802 - +0.5 2,348,857 + -0.3 2,348,940 - +0.3 2,348,940 - -0.8 2,348,940 - +0.1 2,349,136 + Pf6N2E2_1983 0.15 +0.4 2,349,137 - Pf6N2E2_1983 0.16 -0.4 2,349,187 - Pf6N2E2_1983 0.47 -1.3 2,349,187 - Pf6N2E2_1983 0.47 -0.0 2,349,187 - Pf6N2E2_1983 0.47 -1.2 2,349,281 - +1.6 2,349,281 - -1.5 2,349,298 - +1.2 2,349,494 - Pf6N2E2_1984 0.30 +1.5 2,349,497 + Pf6N2E2_1984 0.30 +0.7 2,349,497 + +0.5 2,349,567 - Pf6N2E2_1984 0.40 +0.6 2,349,598 - Pf6N2E2_1984 0.44 +1.1 2,349,669 + Pf6N2E2_1984 0.54 +0.5 2,349,859 + Pf6N2E2_1984 0.80 -0.3 2,349,860 - Pf6N2E2_1984 0.80 -0.3 2,349,904 + Pf6N2E2_1984 0.87 -0.8 2,350,099 + +0.5
Or see this region's nucleotide sequence