Experiment: LB no stress 24 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1442 and Pf6N2E2_1443 are separated by 113 nucleotides Pf6N2E2_1443 and Pf6N2E2_1444 are separated by 92 nucleotides
Pf6N2E2_1442 - Transcriptional regulators of sugar metabolism, at 1,692,176 to 1,692,970
_1442
Pf6N2E2_1443 - putative aldo/keto reductase, at 1,693,084 to 1,694,091
_1443
Pf6N2E2_1444 - Transcriptional regulator, LysR family, at 1,694,184 to 1,695,086
_1444
Position (kb)
1693
1694
1695 Strain fitness (log2 ratio)
-2
-1
0
1 at 1692.101 kb on - strand at 1692.139 kb on + strand at 1692.140 kb on - strand at 1692.140 kb on - strand at 1692.140 kb on - strand at 1692.140 kb on - strand at 1692.140 kb on - strand at 1692.140 kb on - strand at 1692.170 kb on - strand at 1692.182 kb on - strand at 1692.182 kb on - strand at 1692.182 kb on - strand at 1692.228 kb on + strand at 1692.228 kb on + strand at 1692.462 kb on + strand, within Pf6N2E2_1442 at 1692.463 kb on - strand, within Pf6N2E2_1442 at 1692.749 kb on + strand, within Pf6N2E2_1442 at 1692.750 kb on - strand, within Pf6N2E2_1442 at 1692.750 kb on - strand, within Pf6N2E2_1442 at 1692.750 kb on - strand, within Pf6N2E2_1442 at 1692.783 kb on - strand, within Pf6N2E2_1442 at 1692.795 kb on + strand, within Pf6N2E2_1442 at 1692.809 kb on + strand, within Pf6N2E2_1442 at 1693.029 kb on - strand at 1693.452 kb on - strand, within Pf6N2E2_1443 at 1693.452 kb on - strand, within Pf6N2E2_1443 at 1693.527 kb on - strand, within Pf6N2E2_1443 at 1693.573 kb on - strand, within Pf6N2E2_1443 at 1693.911 kb on - strand, within Pf6N2E2_1443 at 1693.911 kb on - strand, within Pf6N2E2_1443 at 1693.955 kb on + strand, within Pf6N2E2_1443 at 1693.955 kb on + strand, within Pf6N2E2_1443 at 1693.955 kb on + strand, within Pf6N2E2_1443 at 1694.091 kb on + strand at 1694.092 kb on - strand at 1694.386 kb on + strand, within Pf6N2E2_1444 at 1694.706 kb on + strand, within Pf6N2E2_1444 at 1694.706 kb on + strand, within Pf6N2E2_1444 at 1694.707 kb on - strand, within Pf6N2E2_1444 at 1694.805 kb on + strand, within Pf6N2E2_1444 at 1694.805 kb on + strand, within Pf6N2E2_1444 at 1694.806 kb on - strand, within Pf6N2E2_1444 at 1695.006 kb on + strand at 1695.007 kb on - strand at 1695.007 kb on - strand at 1695.009 kb on + strand at 1695.010 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress 24 hours remove 1,692,101 - -0.5 1,692,139 + -0.4 1,692,140 - -0.4 1,692,140 - +0.9 1,692,140 - +0.3 1,692,140 - +0.1 1,692,140 - +1.0 1,692,140 - -0.0 1,692,170 - -0.6 1,692,182 - +0.1 1,692,182 - +0.1 1,692,182 - -1.4 1,692,228 + -0.0 1,692,228 + +1.4 1,692,462 + Pf6N2E2_1442 0.36 -1.1 1,692,463 - Pf6N2E2_1442 0.36 -0.2 1,692,749 + Pf6N2E2_1442 0.72 +0.0 1,692,750 - Pf6N2E2_1442 0.72 +0.0 1,692,750 - Pf6N2E2_1442 0.72 +0.2 1,692,750 - Pf6N2E2_1442 0.72 -0.3 1,692,783 - Pf6N2E2_1442 0.76 -0.5 1,692,795 + Pf6N2E2_1442 0.78 +0.2 1,692,809 + Pf6N2E2_1442 0.80 -0.1 1,693,029 - +0.5 1,693,452 - Pf6N2E2_1443 0.37 -2.7 1,693,452 - Pf6N2E2_1443 0.37 -1.2 1,693,527 - Pf6N2E2_1443 0.44 -1.9 1,693,573 - Pf6N2E2_1443 0.49 +0.5 1,693,911 - Pf6N2E2_1443 0.82 -0.1 1,693,911 - Pf6N2E2_1443 0.82 -0.3 1,693,955 + Pf6N2E2_1443 0.86 -0.6 1,693,955 + Pf6N2E2_1443 0.86 -0.5 1,693,955 + Pf6N2E2_1443 0.86 +0.1 1,694,091 + +1.0 1,694,092 - -0.3 1,694,386 + Pf6N2E2_1444 0.22 -0.7 1,694,706 + Pf6N2E2_1444 0.58 -1.1 1,694,706 + Pf6N2E2_1444 0.58 -1.2 1,694,707 - Pf6N2E2_1444 0.58 +0.2 1,694,805 + Pf6N2E2_1444 0.69 -0.5 1,694,805 + Pf6N2E2_1444 0.69 -0.2 1,694,806 - Pf6N2E2_1444 0.69 +0.5 1,695,006 + +0.6 1,695,007 - -0.3 1,695,007 - -1.2 1,695,009 + -0.4 1,695,010 - +0.7
Or see this region's nucleotide sequence