Experiment: LB no stress 24 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1403 and Pf6N2E2_1404 are separated by 30 nucleotides Pf6N2E2_1404 and Pf6N2E2_1405 overlap by 4 nucleotides Pf6N2E2_1405 and Pf6N2E2_1406 overlap by 4 nucleotides
Pf6N2E2_1403 - Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL, at 1,643,699 to 1,644,226
_1403
Pf6N2E2_1404 - Nitrous oxide reductase maturation transmembrane protein NosY, at 1,644,257 to 1,645,087
_1404
Pf6N2E2_1405 - Nitrous oxide reductase maturation protein NosF (ATPase), at 1,645,084 to 1,646,001
_1405
Pf6N2E2_1406 - Nitrous oxide reductase maturation protein NosD, at 1,645,998 to 1,647,311
_1406
Position (kb)
1645
1646
1647 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1644.213 kb on + strand at 1644.213 kb on + strand at 1644.214 kb on - strand at 1644.214 kb on - strand at 1644.214 kb on - strand at 1644.314 kb on + strand at 1644.315 kb on - strand at 1644.603 kb on + strand, within Pf6N2E2_1404 at 1644.603 kb on + strand, within Pf6N2E2_1404 at 1644.604 kb on - strand, within Pf6N2E2_1404 at 1644.604 kb on - strand, within Pf6N2E2_1404 at 1644.810 kb on + strand, within Pf6N2E2_1404 at 1644.865 kb on - strand, within Pf6N2E2_1404 at 1645.087 kb on + strand at 1645.121 kb on + strand at 1645.121 kb on + strand at 1645.121 kb on + strand at 1645.121 kb on + strand at 1645.121 kb on + strand at 1645.121 kb on + strand at 1645.121 kb on + strand at 1645.121 kb on + strand at 1645.122 kb on - strand at 1645.122 kb on - strand at 1645.122 kb on - strand at 1645.122 kb on - strand at 1645.122 kb on - strand at 1645.122 kb on - strand at 1645.122 kb on - strand at 1645.206 kb on + strand, within Pf6N2E2_1405 at 1645.207 kb on - strand, within Pf6N2E2_1405 at 1645.499 kb on + strand, within Pf6N2E2_1405 at 1645.499 kb on + strand, within Pf6N2E2_1405 at 1645.500 kb on - strand, within Pf6N2E2_1405 at 1645.616 kb on + strand, within Pf6N2E2_1405 at 1645.617 kb on - strand, within Pf6N2E2_1405 at 1645.617 kb on - strand, within Pf6N2E2_1405 at 1645.745 kb on + strand, within Pf6N2E2_1405 at 1645.745 kb on + strand, within Pf6N2E2_1405 at 1645.770 kb on - strand at 1645.965 kb on - strand at 1645.965 kb on - strand at 1646.165 kb on - strand, within Pf6N2E2_1406 at 1646.260 kb on + strand, within Pf6N2E2_1406 at 1646.261 kb on - strand, within Pf6N2E2_1406 at 1646.261 kb on - strand, within Pf6N2E2_1406 at 1646.308 kb on + strand, within Pf6N2E2_1406 at 1646.309 kb on - strand, within Pf6N2E2_1406 at 1646.309 kb on - strand, within Pf6N2E2_1406 at 1646.309 kb on - strand, within Pf6N2E2_1406 at 1646.441 kb on - strand, within Pf6N2E2_1406 at 1646.536 kb on + strand, within Pf6N2E2_1406 at 1646.536 kb on + strand, within Pf6N2E2_1406 at 1646.536 kb on + strand, within Pf6N2E2_1406 at 1646.537 kb on - strand, within Pf6N2E2_1406 at 1646.537 kb on - strand, within Pf6N2E2_1406 at 1646.545 kb on + strand, within Pf6N2E2_1406 at 1646.545 kb on + strand, within Pf6N2E2_1406 at 1646.545 kb on + strand, within Pf6N2E2_1406 at 1646.545 kb on + strand, within Pf6N2E2_1406 at 1646.545 kb on + strand, within Pf6N2E2_1406 at 1646.545 kb on + strand, within Pf6N2E2_1406 at 1646.640 kb on - strand, within Pf6N2E2_1406 at 1646.686 kb on + strand, within Pf6N2E2_1406 at 1646.686 kb on + strand, within Pf6N2E2_1406 at 1646.686 kb on + strand, within Pf6N2E2_1406 at 1646.686 kb on + strand, within Pf6N2E2_1406 at 1646.686 kb on + strand, within Pf6N2E2_1406 at 1646.686 kb on + strand, within Pf6N2E2_1406 at 1646.687 kb on - strand, within Pf6N2E2_1406 at 1646.687 kb on - strand, within Pf6N2E2_1406 at 1646.755 kb on + strand, within Pf6N2E2_1406 at 1646.755 kb on + strand, within Pf6N2E2_1406 at 1646.755 kb on + strand, within Pf6N2E2_1406 at 1646.756 kb on - strand, within Pf6N2E2_1406 at 1646.756 kb on - strand, within Pf6N2E2_1406 at 1646.809 kb on - strand, within Pf6N2E2_1406 at 1646.815 kb on + strand, within Pf6N2E2_1406
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress 24 hours remove 1,644,213 + -0.6 1,644,213 + -0.8 1,644,214 - +0.7 1,644,214 - -0.8 1,644,214 - +0.9 1,644,314 + +1.1 1,644,315 - +0.9 1,644,603 + Pf6N2E2_1404 0.42 -1.4 1,644,603 + Pf6N2E2_1404 0.42 +0.4 1,644,604 - Pf6N2E2_1404 0.42 -0.4 1,644,604 - Pf6N2E2_1404 0.42 -0.6 1,644,810 + Pf6N2E2_1404 0.67 +2.1 1,644,865 - Pf6N2E2_1404 0.73 -0.2 1,645,087 + +0.8 1,645,121 + +2.1 1,645,121 + -0.2 1,645,121 + +1.0 1,645,121 + -1.1 1,645,121 + -2.6 1,645,121 + -1.4 1,645,121 + -0.1 1,645,121 + -1.2 1,645,122 - +0.9 1,645,122 - +0.4 1,645,122 - -1.0 1,645,122 - +1.1 1,645,122 - +0.0 1,645,122 - +0.2 1,645,122 - +0.6 1,645,206 + Pf6N2E2_1405 0.13 +1.2 1,645,207 - Pf6N2E2_1405 0.13 +1.1 1,645,499 + Pf6N2E2_1405 0.45 +2.4 1,645,499 + Pf6N2E2_1405 0.45 +0.2 1,645,500 - Pf6N2E2_1405 0.45 -0.4 1,645,616 + Pf6N2E2_1405 0.58 -1.1 1,645,617 - Pf6N2E2_1405 0.58 +2.7 1,645,617 - Pf6N2E2_1405 0.58 +1.1 1,645,745 + Pf6N2E2_1405 0.72 +1.0 1,645,745 + Pf6N2E2_1405 0.72 -1.1 1,645,770 - +2.4 1,645,965 - +1.0 1,645,965 - +0.5 1,646,165 - Pf6N2E2_1406 0.13 +1.4 1,646,260 + Pf6N2E2_1406 0.20 -0.5 1,646,261 - Pf6N2E2_1406 0.20 +0.0 1,646,261 - Pf6N2E2_1406 0.20 +0.9 1,646,308 + Pf6N2E2_1406 0.24 -1.1 1,646,309 - Pf6N2E2_1406 0.24 -0.2 1,646,309 - Pf6N2E2_1406 0.24 -0.6 1,646,309 - Pf6N2E2_1406 0.24 +0.7 1,646,441 - Pf6N2E2_1406 0.34 -0.6 1,646,536 + Pf6N2E2_1406 0.41 +0.8 1,646,536 + Pf6N2E2_1406 0.41 -1.2 1,646,536 + Pf6N2E2_1406 0.41 -1.6 1,646,537 - Pf6N2E2_1406 0.41 +1.6 1,646,537 - Pf6N2E2_1406 0.41 +0.3 1,646,545 + Pf6N2E2_1406 0.42 +1.4 1,646,545 + Pf6N2E2_1406 0.42 -0.1 1,646,545 + Pf6N2E2_1406 0.42 -0.9 1,646,545 + Pf6N2E2_1406 0.42 +1.4 1,646,545 + Pf6N2E2_1406 0.42 -2.0 1,646,545 + Pf6N2E2_1406 0.42 +0.5 1,646,640 - Pf6N2E2_1406 0.49 +1.9 1,646,686 + Pf6N2E2_1406 0.52 -0.4 1,646,686 + Pf6N2E2_1406 0.52 +1.1 1,646,686 + Pf6N2E2_1406 0.52 -0.3 1,646,686 + Pf6N2E2_1406 0.52 +0.7 1,646,686 + Pf6N2E2_1406 0.52 -0.4 1,646,686 + Pf6N2E2_1406 0.52 +1.0 1,646,687 - Pf6N2E2_1406 0.52 -2.3 1,646,687 - Pf6N2E2_1406 0.52 -2.1 1,646,755 + Pf6N2E2_1406 0.58 +0.4 1,646,755 + Pf6N2E2_1406 0.58 -0.6 1,646,755 + Pf6N2E2_1406 0.58 +0.5 1,646,756 - Pf6N2E2_1406 0.58 +0.3 1,646,756 - Pf6N2E2_1406 0.58 -1.0 1,646,809 - Pf6N2E2_1406 0.62 +2.4 1,646,815 + Pf6N2E2_1406 0.62 +0.4
Or see this region's nucleotide sequence