Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23395 and AO353_23400 are separated by 143 nucleotides AO353_23400 and AO353_23405 are separated by 194 nucleotides AO353_23405 and AO353_23410 are separated by 69 nucleotides AO353_23410 and AO353_23415 are separated by 276 nucleotides
AO353_23395: AO353_23395 - hypothetical protein, at 5,127,865 to 5,128,494
_23395
AO353_23400: AO353_23400 - hypothetical protein, at 5,128,638 to 5,128,967
_23400
AO353_23405: AO353_23405 - hypothetical protein, at 5,129,162 to 5,129,362
_23405
AO353_23410: AO353_23410 - hypothetical protein, at 5,129,432 to 5,129,716
_23410
AO353_23415: AO353_23415 - lysine transporter LysE, at 5,129,993 to 5,130,580
_23415
Position (kb)
5129
5130 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5128.163 kb on + strand, within AO353_23395 at 5128.164 kb on - strand at 5128.229 kb on + strand, within AO353_23395 at 5128.230 kb on - strand, within AO353_23395 at 5128.271 kb on - strand, within AO353_23395 at 5128.331 kb on + strand, within AO353_23395 at 5128.331 kb on + strand, within AO353_23395 at 5128.332 kb on - strand, within AO353_23395 at 5128.350 kb on + strand, within AO353_23395 at 5128.350 kb on + strand, within AO353_23395 at 5128.351 kb on - strand, within AO353_23395 at 5128.351 kb on - strand, within AO353_23395 at 5128.489 kb on - strand at 5128.530 kb on - strand at 5128.543 kb on + strand at 5128.543 kb on + strand at 5128.550 kb on - strand at 5128.834 kb on + strand, within AO353_23400 at 5128.834 kb on + strand, within AO353_23400 at 5128.834 kb on + strand, within AO353_23400 at 5128.834 kb on + strand, within AO353_23400 at 5128.834 kb on + strand, within AO353_23400 at 5128.883 kb on - strand, within AO353_23400 at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.959 kb on + strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5128.960 kb on - strand at 5129.003 kb on - strand at 5129.036 kb on + strand at 5129.081 kb on + strand at 5129.081 kb on + strand at 5129.082 kb on - strand at 5129.092 kb on + strand at 5129.093 kb on - strand at 5129.105 kb on + strand at 5129.105 kb on + strand at 5129.106 kb on - strand at 5129.106 kb on - strand at 5129.278 kb on + strand, within AO353_23405 at 5129.333 kb on + strand, within AO353_23405 at 5129.334 kb on - strand, within AO353_23405 at 5129.334 kb on - strand, within AO353_23405 at 5129.334 kb on - strand, within AO353_23405 at 5129.334 kb on - strand, within AO353_23405 at 5129.384 kb on + strand at 5129.433 kb on + strand at 5129.433 kb on + strand at 5129.439 kb on + strand at 5129.440 kb on - strand at 5129.440 kb on - strand at 5129.549 kb on - strand, within AO353_23410 at 5129.650 kb on + strand, within AO353_23410 at 5129.650 kb on + strand, within AO353_23410 at 5129.651 kb on - strand, within AO353_23410 at 5129.701 kb on + strand at 5129.701 kb on + strand at 5129.701 kb on + strand at 5129.701 kb on + strand at 5129.701 kb on + strand at 5129.701 kb on + strand at 5129.701 kb on + strand at 5129.702 kb on - strand at 5129.702 kb on - strand at 5129.702 kb on - strand at 5129.849 kb on + strand at 5129.849 kb on + strand at 5129.852 kb on + strand at 5129.852 kb on + strand at 5129.852 kb on + strand at 5129.852 kb on + strand at 5129.852 kb on + strand at 5129.853 kb on - strand at 5129.853 kb on - strand at 5129.853 kb on - strand at 5129.853 kb on - strand at 5129.853 kb on - strand at 5129.853 kb on - strand at 5129.925 kb on + strand at 5129.925 kb on + strand at 5129.925 kb on + strand at 5129.925 kb on + strand at 5129.925 kb on + strand at 5129.925 kb on + strand at 5129.926 kb on - strand at 5129.933 kb on + strand at 5129.933 kb on + strand at 5129.934 kb on - strand at 5129.934 kb on - strand at 5129.948 kb on - strand at 5129.948 kb on - strand at 5129.975 kb on + strand at 5129.976 kb on - strand at 5129.976 kb on - strand at 5130.114 kb on + strand, within AO353_23415 at 5130.114 kb on + strand, within AO353_23415 at 5130.115 kb on - strand, within AO353_23415 at 5130.115 kb on - strand, within AO353_23415 at 5130.115 kb on - strand, within AO353_23415 at 5130.180 kb on + strand, within AO353_23415 at 5130.314 kb on + strand, within AO353_23415 at 5130.314 kb on + strand, within AO353_23415 at 5130.337 kb on - strand, within AO353_23415 at 5130.337 kb on - strand, within AO353_23415
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 5,128,163 + AO353_23395 0.47 +0.4 5,128,164 - +0.5 5,128,229 + AO353_23395 0.58 -0.9 5,128,230 - AO353_23395 0.58 -0.9 5,128,271 - AO353_23395 0.64 -0.1 5,128,331 + AO353_23395 0.74 -0.6 5,128,331 + AO353_23395 0.74 +0.9 5,128,332 - AO353_23395 0.74 +0.0 5,128,350 + AO353_23395 0.77 +0.4 5,128,350 + AO353_23395 0.77 +0.8 5,128,351 - AO353_23395 0.77 +0.2 5,128,351 - AO353_23395 0.77 +0.2 5,128,489 - +0.3 5,128,530 - -1.9 5,128,543 + +1.5 5,128,543 + +0.5 5,128,550 - -0.7 5,128,834 + AO353_23400 0.59 -1.4 5,128,834 + AO353_23400 0.59 +2.3 5,128,834 + AO353_23400 0.59 -0.7 5,128,834 + AO353_23400 0.59 +0.7 5,128,834 + AO353_23400 0.59 -0.6 5,128,883 - AO353_23400 0.74 +0.8 5,128,959 + +0.6 5,128,959 + +0.9 5,128,959 + -1.1 5,128,959 + -3.3 5,128,959 + +0.7 5,128,959 + +1.5 5,128,959 + -0.3 5,128,959 + +0.3 5,128,959 + +1.6 5,128,959 + -0.2 5,128,959 + -0.9 5,128,959 + +0.6 5,128,959 + -0.3 5,128,960 - +1.7 5,128,960 - -1.5 5,128,960 - -0.8 5,128,960 - -1.2 5,128,960 - -0.5 5,128,960 - +0.9 5,128,960 - +0.1 5,128,960 - -0.5 5,128,960 - +2.0 5,128,960 - +1.3 5,128,960 - -0.5 5,128,960 - -1.7 5,128,960 - +0.4 5,128,960 - -0.9 5,129,003 - -0.7 5,129,036 + -1.9 5,129,081 + -1.1 5,129,081 + -1.1 5,129,082 - -0.6 5,129,092 + -0.5 5,129,093 - -0.5 5,129,105 + -0.4 5,129,105 + -0.5 5,129,106 - -0.2 5,129,106 - -0.2 5,129,278 + AO353_23405 0.58 -0.7 5,129,333 + AO353_23405 0.85 +0.4 5,129,334 - AO353_23405 0.86 -1.9 5,129,334 - AO353_23405 0.86 -1.9 5,129,334 - AO353_23405 0.86 +1.0 5,129,334 - AO353_23405 0.86 -1.7 5,129,384 + -1.8 5,129,433 + -0.7 5,129,433 + +0.3 5,129,439 + -2.1 5,129,440 - -1.1 5,129,440 - -0.9 5,129,549 - AO353_23410 0.41 +2.2 5,129,650 + AO353_23410 0.76 -1.7 5,129,650 + AO353_23410 0.76 -1.6 5,129,651 - AO353_23410 0.77 -0.3 5,129,701 + +2.4 5,129,701 + +0.8 5,129,701 + +2.1 5,129,701 + -1.7 5,129,701 + -0.9 5,129,701 + -1.0 5,129,701 + -1.7 5,129,702 - -0.1 5,129,702 - +0.3 5,129,702 - -0.4 5,129,849 + +1.3 5,129,849 + -0.7 5,129,852 + -1.0 5,129,852 + +0.9 5,129,852 + +0.1 5,129,852 + +0.6 5,129,852 + -2.0 5,129,853 - -0.9 5,129,853 - -0.1 5,129,853 - -1.3 5,129,853 - +0.3 5,129,853 - -1.7 5,129,853 - -0.1 5,129,925 + -1.4 5,129,925 + -0.0 5,129,925 + +0.3 5,129,925 + +0.2 5,129,925 + -0.1 5,129,925 + +0.1 5,129,926 - -0.4 5,129,933 + +0.5 5,129,933 + -1.7 5,129,934 - -0.7 5,129,934 - +1.9 5,129,948 - +0.4 5,129,948 - -1.7 5,129,975 + +0.6 5,129,976 - -1.6 5,129,976 - -1.1 5,130,114 + AO353_23415 0.21 +0.6 5,130,114 + AO353_23415 0.21 +0.0 5,130,115 - AO353_23415 0.21 +0.9 5,130,115 - AO353_23415 0.21 +0.6 5,130,115 - AO353_23415 0.21 +0.0 5,130,180 + AO353_23415 0.32 -0.7 5,130,314 + AO353_23415 0.55 -0.7 5,130,314 + AO353_23415 0.55 +0.3 5,130,337 - AO353_23415 0.59 +0.0 5,130,337 - AO353_23415 0.59 -0.8
Or see this region's nucleotide sequence