Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19955 and AO353_19960 are separated by 52 nucleotides AO353_19960 and AO353_19965 are separated by 11 nucleotides AO353_19965 and AO353_19970 are separated by 25 nucleotides
AO353_19955: AO353_19955 - pyruvate dehydrogenase, at 4,387,527 to 4,388,507
_19955
AO353_19960: AO353_19960 - branched-chain alpha-keto acid dehydrogenase subunit E2, at 4,388,560 to 4,389,678
_19960
AO353_19965: AO353_19965 - phosphopantetheine-binding protein, at 4,389,690 to 4,389,932
_19965
AO353_19970: AO353_19970 - peptidase, at 4,389,958 to 4,390,551
_19970
Position (kb)
4388
4389
4390 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4387.630 kb on - strand, within AO353_19955 at 4387.641 kb on + strand, within AO353_19955 at 4387.641 kb on + strand, within AO353_19955 at 4387.641 kb on + strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.685 kb on + strand, within AO353_19955 at 4387.686 kb on - strand, within AO353_19955 at 4387.765 kb on + strand, within AO353_19955 at 4387.766 kb on - strand, within AO353_19955 at 4387.766 kb on - strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.938 kb on + strand, within AO353_19955 at 4388.058 kb on + strand, within AO353_19955 at 4388.058 kb on + strand, within AO353_19955 at 4388.058 kb on + strand, within AO353_19955 at 4388.552 kb on + strand at 4388.552 kb on + strand at 4388.553 kb on - strand at 4388.553 kb on - strand at 4388.553 kb on - strand at 4388.553 kb on - strand at 4388.669 kb on + strand at 4388.670 kb on - strand at 4388.670 kb on - strand at 4388.693 kb on + strand, within AO353_19960 at 4388.693 kb on + strand, within AO353_19960 at 4388.694 kb on - strand, within AO353_19960 at 4388.704 kb on + strand, within AO353_19960 at 4388.705 kb on - strand, within AO353_19960 at 4388.814 kb on - strand, within AO353_19960 at 4388.814 kb on - strand, within AO353_19960 at 4388.814 kb on - strand, within AO353_19960 at 4389.080 kb on - strand, within AO353_19960 at 4389.080 kb on - strand, within AO353_19960 at 4389.080 kb on - strand, within AO353_19960 at 4389.080 kb on - strand, within AO353_19960 at 4389.082 kb on + strand, within AO353_19960 at 4389.082 kb on + strand, within AO353_19960 at 4389.082 kb on + strand, within AO353_19960 at 4389.082 kb on + strand, within AO353_19960 at 4389.082 kb on + strand, within AO353_19960 at 4389.083 kb on - strand, within AO353_19960 at 4389.126 kb on - strand, within AO353_19960 at 4389.176 kb on + strand at 4389.176 kb on + strand, within AO353_19960 at 4389.176 kb on + strand, within AO353_19960 at 4389.176 kb on + strand, within AO353_19960 at 4389.177 kb on - strand, within AO353_19960 at 4389.214 kb on + strand, within AO353_19960 at 4389.214 kb on + strand, within AO353_19960 at 4389.268 kb on - strand, within AO353_19960 at 4389.339 kb on + strand, within AO353_19960 at 4389.339 kb on + strand, within AO353_19960 at 4389.339 kb on + strand, within AO353_19960 at 4389.620 kb on - strand at 4389.737 kb on + strand, within AO353_19965 at 4389.737 kb on + strand, within AO353_19965 at 4389.737 kb on + strand, within AO353_19965 at 4389.738 kb on - strand, within AO353_19965 at 4389.738 kb on - strand, within AO353_19965 at 4389.738 kb on - strand, within AO353_19965 at 4389.766 kb on + strand, within AO353_19965 at 4389.767 kb on - strand, within AO353_19965 at 4389.767 kb on - strand, within AO353_19965 at 4389.767 kb on - strand, within AO353_19965 at 4389.767 kb on - strand, within AO353_19965 at 4389.912 kb on + strand at 4389.912 kb on + strand at 4389.912 kb on + strand at 4389.913 kb on - strand at 4389.913 kb on - strand at 4389.913 kb on - strand at 4389.913 kb on - strand at 4389.913 kb on - strand at 4389.913 kb on - strand at 4389.913 kb on - strand at 4389.995 kb on + strand at 4390.097 kb on + strand, within AO353_19970 at 4390.097 kb on + strand, within AO353_19970 at 4390.098 kb on - strand, within AO353_19970 at 4390.178 kb on + strand, within AO353_19970 at 4390.178 kb on + strand, within AO353_19970 at 4390.179 kb on - strand, within AO353_19970 at 4390.179 kb on - strand, within AO353_19970 at 4390.230 kb on + strand, within AO353_19970 at 4390.231 kb on - strand, within AO353_19970 at 4390.255 kb on + strand, within AO353_19970 at 4390.256 kb on - strand, within AO353_19970 at 4390.292 kb on + strand, within AO353_19970 at 4390.293 kb on - strand, within AO353_19970 at 4390.293 kb on - strand, within AO353_19970 at 4390.293 kb on - strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.349 kb on + strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.350 kb on - strand, within AO353_19970 at 4390.403 kb on + strand, within AO353_19970 at 4390.403 kb on + strand, within AO353_19970 at 4390.403 kb on + strand, within AO353_19970 at 4390.403 kb on + strand, within AO353_19970 at 4390.403 kb on + strand, within AO353_19970 at 4390.404 kb on - strand, within AO353_19970 at 4390.404 kb on - strand, within AO353_19970 at 4390.404 kb on - strand, within AO353_19970 at 4390.404 kb on - strand, within AO353_19970 at 4390.404 kb on - strand, within AO353_19970 at 4390.424 kb on + strand, within AO353_19970 at 4390.425 kb on - strand, within AO353_19970 at 4390.510 kb on + strand at 4390.580 kb on - strand at 4390.580 kb on - strand at 4390.580 kb on - strand at 4390.590 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,387,630 - AO353_19955 0.10 +0.1 4,387,641 + AO353_19955 0.12 +0.2 4,387,641 + AO353_19955 0.12 +0.1 4,387,641 + AO353_19955 0.12 -0.0 4,387,642 - AO353_19955 0.12 +1.1 4,387,642 - AO353_19955 0.12 +0.1 4,387,642 - AO353_19955 0.12 -1.8 4,387,642 - AO353_19955 0.12 +0.1 4,387,642 - AO353_19955 0.12 -1.4 4,387,642 - AO353_19955 0.12 +0.3 4,387,642 - AO353_19955 0.12 -1.3 4,387,642 - AO353_19955 0.12 +0.7 4,387,685 + AO353_19955 0.16 +0.4 4,387,686 - AO353_19955 0.16 -0.4 4,387,765 + AO353_19955 0.24 +0.1 4,387,766 - AO353_19955 0.24 -0.2 4,387,766 - AO353_19955 0.24 -0.9 4,387,838 + AO353_19955 0.32 +0.1 4,387,838 + AO353_19955 0.32 +1.1 4,387,838 + AO353_19955 0.32 -0.6 4,387,838 + AO353_19955 0.32 -3.0 4,387,838 + AO353_19955 0.32 +0.3 4,387,838 + AO353_19955 0.32 -0.4 4,387,838 + AO353_19955 0.32 -1.0 4,387,838 + AO353_19955 0.32 -0.5 4,387,838 + AO353_19955 0.32 -0.3 4,387,838 + AO353_19955 0.32 -0.3 4,387,838 + AO353_19955 0.32 -0.8 4,387,838 + AO353_19955 0.32 -0.5 4,387,839 - AO353_19955 0.32 +0.7 4,387,839 - AO353_19955 0.32 +1.0 4,387,839 - AO353_19955 0.32 +0.6 4,387,839 - AO353_19955 0.32 +0.3 4,387,839 - AO353_19955 0.32 -1.0 4,387,839 - AO353_19955 0.32 -0.6 4,387,839 - AO353_19955 0.32 +0.7 4,387,839 - AO353_19955 0.32 -0.6 4,387,839 - AO353_19955 0.32 +0.1 4,387,839 - AO353_19955 0.32 +0.3 4,387,839 - AO353_19955 0.32 -0.2 4,387,938 + AO353_19955 0.42 +1.0 4,388,058 + AO353_19955 0.54 +0.9 4,388,058 + AO353_19955 0.54 +0.4 4,388,058 + AO353_19955 0.54 +0.2 4,388,552 + +2.6 4,388,552 + +0.6 4,388,553 - +0.2 4,388,553 - -0.4 4,388,553 - +0.4 4,388,553 - -0.8 4,388,669 + +0.6 4,388,670 - +0.6 4,388,670 - -0.7 4,388,693 + AO353_19960 0.12 -0.0 4,388,693 + AO353_19960 0.12 -1.0 4,388,694 - AO353_19960 0.12 -1.0 4,388,704 + AO353_19960 0.13 +0.5 4,388,705 - AO353_19960 0.13 -0.8 4,388,814 - AO353_19960 0.23 +2.0 4,388,814 - AO353_19960 0.23 -0.0 4,388,814 - AO353_19960 0.23 +0.2 4,389,080 - AO353_19960 0.46 -0.5 4,389,080 - AO353_19960 0.46 -1.3 4,389,080 - AO353_19960 0.46 -0.0 4,389,080 - AO353_19960 0.46 -0.6 4,389,082 + AO353_19960 0.47 +0.4 4,389,082 + AO353_19960 0.47 +0.2 4,389,082 + AO353_19960 0.47 +0.7 4,389,082 + AO353_19960 0.47 -0.3 4,389,082 + AO353_19960 0.47 +0.2 4,389,083 - AO353_19960 0.47 -0.0 4,389,126 - AO353_19960 0.51 -1.0 4,389,176 + +0.6 4,389,176 + AO353_19960 0.55 -1.0 4,389,176 + AO353_19960 0.55 -0.6 4,389,176 + AO353_19960 0.55 -1.3 4,389,177 - AO353_19960 0.55 -1.8 4,389,214 + AO353_19960 0.58 -1.1 4,389,214 + AO353_19960 0.58 -0.7 4,389,268 - AO353_19960 0.63 -2.4 4,389,339 + AO353_19960 0.70 -0.7 4,389,339 + AO353_19960 0.70 +1.6 4,389,339 + AO353_19960 0.70 -0.4 4,389,620 - +0.1 4,389,737 + AO353_19965 0.19 +0.8 4,389,737 + AO353_19965 0.19 -1.0 4,389,737 + AO353_19965 0.19 +0.7 4,389,738 - AO353_19965 0.20 -0.6 4,389,738 - AO353_19965 0.20 -0.8 4,389,738 - AO353_19965 0.20 -0.7 4,389,766 + AO353_19965 0.31 -1.6 4,389,767 - AO353_19965 0.32 +0.6 4,389,767 - AO353_19965 0.32 -0.2 4,389,767 - AO353_19965 0.32 -0.4 4,389,767 - AO353_19965 0.32 -0.4 4,389,912 + -0.3 4,389,912 + +0.1 4,389,912 + -0.8 4,389,913 - -0.4 4,389,913 - -0.8 4,389,913 - -0.0 4,389,913 - -0.3 4,389,913 - -1.0 4,389,913 - +0.4 4,389,913 - +0.8 4,389,995 + -0.1 4,390,097 + AO353_19970 0.23 -0.1 4,390,097 + AO353_19970 0.23 +0.1 4,390,098 - AO353_19970 0.24 -0.2 4,390,178 + AO353_19970 0.37 -0.6 4,390,178 + AO353_19970 0.37 +0.8 4,390,179 - AO353_19970 0.37 +0.8 4,390,179 - AO353_19970 0.37 -0.4 4,390,230 + AO353_19970 0.46 +0.1 4,390,231 - AO353_19970 0.46 +0.6 4,390,255 + AO353_19970 0.50 +0.1 4,390,256 - AO353_19970 0.50 -0.2 4,390,292 + AO353_19970 0.56 -0.7 4,390,293 - AO353_19970 0.56 +0.8 4,390,293 - AO353_19970 0.56 -0.5 4,390,293 - AO353_19970 0.56 -1.0 4,390,349 + AO353_19970 0.66 +1.3 4,390,349 + AO353_19970 0.66 -0.7 4,390,349 + AO353_19970 0.66 -1.1 4,390,349 + AO353_19970 0.66 +0.6 4,390,349 + AO353_19970 0.66 +0.9 4,390,349 + AO353_19970 0.66 -0.1 4,390,349 + AO353_19970 0.66 -0.1 4,390,349 + AO353_19970 0.66 +2.1 4,390,349 + AO353_19970 0.66 -1.8 4,390,349 + AO353_19970 0.66 -1.0 4,390,350 - AO353_19970 0.66 -1.5 4,390,350 - AO353_19970 0.66 +0.1 4,390,350 - AO353_19970 0.66 -0.0 4,390,350 - AO353_19970 0.66 -0.8 4,390,350 - AO353_19970 0.66 -0.9 4,390,350 - AO353_19970 0.66 -0.1 4,390,350 - AO353_19970 0.66 +1.2 4,390,350 - AO353_19970 0.66 -1.2 4,390,350 - AO353_19970 0.66 +0.6 4,390,350 - AO353_19970 0.66 +0.4 4,390,350 - AO353_19970 0.66 -0.8 4,390,350 - AO353_19970 0.66 -1.3 4,390,350 - AO353_19970 0.66 +0.0 4,390,403 + AO353_19970 0.75 +0.8 4,390,403 + AO353_19970 0.75 -2.6 4,390,403 + AO353_19970 0.75 -2.1 4,390,403 + AO353_19970 0.75 +1.6 4,390,403 + AO353_19970 0.75 +0.1 4,390,404 - AO353_19970 0.75 +0.5 4,390,404 - AO353_19970 0.75 -1.0 4,390,404 - AO353_19970 0.75 +1.3 4,390,404 - AO353_19970 0.75 +3.4 4,390,404 - AO353_19970 0.75 +1.6 4,390,424 + AO353_19970 0.78 +0.1 4,390,425 - AO353_19970 0.79 +1.2 4,390,510 + +1.3 4,390,580 - +0.1 4,390,580 - +0.5 4,390,580 - +0.7 4,390,590 - -0.0
Or see this region's nucleotide sequence