Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09025 and AO353_09030 are separated by 795 nucleotides AO353_09030 and AO353_09035 are separated by 421 nucleotides
AO353_09025: AO353_09025 - nucleoside diphosphate kinase regulator, at 1,982,202 to 1,982,612
_09025
AO353_09030: AO353_09030 - iron donor protein CyaY, at 1,983,408 to 1,983,740
_09030
AO353_09035: AO353_09035 - diaminopimelate decarboxylase, at 1,984,162 to 1,985,409
_09035
Position (kb)
1983
1984 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1982.666 kb on + strand at 1982.666 kb on + strand at 1982.667 kb on - strand at 1982.715 kb on - strand at 1982.715 kb on - strand at 1982.715 kb on - strand at 1982.732 kb on - strand at 1982.732 kb on - strand at 1982.733 kb on + strand at 1982.734 kb on - strand at 1983.078 kb on + strand at 1983.078 kb on + strand at 1983.078 kb on + strand at 1983.078 kb on + strand at 1983.078 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.104 kb on + strand at 1983.105 kb on - strand at 1983.105 kb on - strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.108 kb on + strand at 1983.109 kb on - strand at 1983.109 kb on - strand at 1983.118 kb on - strand at 1983.118 kb on - strand at 1983.165 kb on + strand at 1983.165 kb on + strand at 1983.165 kb on + strand at 1983.165 kb on + strand at 1983.171 kb on + strand at 1983.172 kb on - strand at 1983.180 kb on + strand at 1983.180 kb on + strand at 1983.180 kb on + strand at 1983.181 kb on - strand at 1983.191 kb on + strand at 1983.192 kb on - strand at 1983.265 kb on + strand at 1983.328 kb on + strand at 1983.328 kb on + strand at 1983.328 kb on + strand at 1983.329 kb on - strand at 1983.329 kb on - strand at 1983.329 kb on - strand at 1983.329 kb on - strand at 1983.363 kb on + strand at 1983.363 kb on + strand at 1983.363 kb on + strand at 1983.363 kb on + strand at 1983.363 kb on + strand at 1983.364 kb on - strand at 1983.364 kb on - strand at 1983.364 kb on - strand at 1983.524 kb on - strand, within AO353_09030 at 1983.677 kb on + strand, within AO353_09030 at 1983.764 kb on - strand at 1983.787 kb on + strand at 1983.787 kb on + strand at 1983.840 kb on + strand at 1983.840 kb on + strand at 1983.840 kb on + strand at 1983.841 kb on - strand at 1983.841 kb on - strand at 1983.841 kb on - strand at 1983.841 kb on - strand at 1983.848 kb on - strand at 1983.916 kb on + strand at 1983.941 kb on + strand at 1983.941 kb on + strand at 1983.941 kb on + strand at 1983.941 kb on + strand at 1983.941 kb on + strand at 1984.060 kb on + strand at 1984.060 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.147 kb on + strand at 1984.150 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,982,666 + -0.1 1,982,666 + +0.5 1,982,667 - -0.2 1,982,715 - +0.7 1,982,715 - +1.2 1,982,715 - +0.1 1,982,732 - -2.4 1,982,732 - +0.7 1,982,733 + -1.5 1,982,734 - -1.6 1,983,078 + +0.1 1,983,078 + +1.0 1,983,078 + +0.1 1,983,078 + +0.4 1,983,078 + -0.5 1,983,104 + +0.6 1,983,104 + -1.0 1,983,104 + -0.8 1,983,104 + +0.2 1,983,104 + -1.3 1,983,104 + -1.0 1,983,104 + -0.1 1,983,104 + +0.7 1,983,104 + +1.5 1,983,104 + -0.3 1,983,104 + +0.0 1,983,104 + -1.4 1,983,104 + -0.6 1,983,104 + -1.3 1,983,104 + -2.1 1,983,105 - +0.0 1,983,105 - +0.6 1,983,108 + +0.3 1,983,108 + +0.7 1,983,108 + -0.9 1,983,108 + +0.1 1,983,108 + +0.2 1,983,108 + +2.0 1,983,108 + +0.2 1,983,108 + -1.1 1,983,108 + -0.9 1,983,108 + +0.1 1,983,108 + -0.7 1,983,108 + -0.5 1,983,108 + +0.2 1,983,108 + -0.9 1,983,108 + +1.2 1,983,108 + -0.1 1,983,108 + -1.0 1,983,108 + -1.4 1,983,108 + +1.2 1,983,108 + -0.7 1,983,108 + -1.0 1,983,108 + -0.4 1,983,108 + -0.5 1,983,108 + -2.1 1,983,108 + -2.1 1,983,108 + +0.5 1,983,108 + -0.8 1,983,109 - +0.8 1,983,109 - +0.9 1,983,118 - -0.4 1,983,118 - +0.7 1,983,165 + -0.8 1,983,165 + +0.5 1,983,165 + -1.1 1,983,165 + +0.2 1,983,171 + +0.8 1,983,172 - -1.0 1,983,180 + -0.1 1,983,180 + -0.0 1,983,180 + +0.4 1,983,181 - +0.8 1,983,191 + -0.1 1,983,192 - +0.8 1,983,265 + -0.4 1,983,328 + +0.6 1,983,328 + -0.4 1,983,328 + -1.0 1,983,329 - -1.1 1,983,329 - +0.2 1,983,329 - -1.4 1,983,329 - -1.4 1,983,363 + -1.1 1,983,363 + -0.5 1,983,363 + -0.2 1,983,363 + +1.5 1,983,363 + +0.0 1,983,364 - +1.1 1,983,364 - -1.0 1,983,364 - -1.2 1,983,524 - AO353_09030 0.35 -1.6 1,983,677 + AO353_09030 0.81 -1.6 1,983,764 - +0.1 1,983,787 + +0.7 1,983,787 + +0.8 1,983,840 + +0.2 1,983,840 + -0.2 1,983,840 + -1.0 1,983,841 - -0.9 1,983,841 - -0.1 1,983,841 - +0.5 1,983,841 - +0.9 1,983,848 - +0.6 1,983,916 + -0.8 1,983,941 + -0.6 1,983,941 + -0.3 1,983,941 + +2.2 1,983,941 + -0.3 1,983,941 + +1.9 1,984,060 + -0.8 1,984,060 + -0.2 1,984,147 + -0.1 1,984,147 + +0.7 1,984,147 + -0.8 1,984,147 + -2.6 1,984,147 + +0.3 1,984,147 + +0.4 1,984,147 + -0.1 1,984,147 + +0.1 1,984,147 + +0.6 1,984,147 + -0.4 1,984,147 + -1.5 1,984,147 + +0.7 1,984,147 + -1.6 1,984,147 + -0.5 1,984,147 + +0.0 1,984,147 + -0.5 1,984,150 + -0.7
Or see this region's nucleotide sequence