Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00585 and AO353_00590 are separated by 10 nucleotides AO353_00590 and AO353_00595 are separated by 9 nucleotides AO353_00595 and AO353_00600 overlap by 4 nucleotides AO353_00600 and AO353_00605 are separated by 483 nucleotides
AO353_00585: AO353_00585 - cytochrome C oxidase Cbb3, at 124,447 to 125,871
_00585
AO353_00590: AO353_00590 - cytochrome C oxidase Cbb3, at 125,882 to 126,490
_00590
AO353_00595: AO353_00595 - cytochrome C oxidase, at 126,500 to 126,706
_00595
AO353_00600: AO353_00600 - cytochrome C oxidase Cbb3, at 126,703 to 127,656
_00600
AO353_00605: AO353_00605 - cytochrome C oxidase Cbb3, at 128,140 to 129,582
_00605
Position (kb) 126
127
128 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 125.708 kb on - strand, within AO353_00585 at 125.708 kb on - strand, within AO353_00585 at 125.746 kb on + strand at 125.746 kb on + strand at 125.746 kb on + strand at 125.747 kb on - strand at 125.747 kb on - strand at 125.803 kb on + strand at 125.803 kb on + strand at 125.803 kb on + strand at 125.804 kb on - strand at 125.804 kb on - strand at 125.804 kb on - strand at 125.804 kb on - strand at 126.023 kb on + strand, within AO353_00590 at 126.023 kb on + strand, within AO353_00590 at 126.023 kb on + strand, within AO353_00590 at 126.024 kb on - strand, within AO353_00590 at 126.024 kb on - strand, within AO353_00590 at 126.056 kb on + strand, within AO353_00590 at 126.056 kb on + strand, within AO353_00590 at 126.056 kb on + strand, within AO353_00590 at 126.057 kb on - strand, within AO353_00590 at 126.057 kb on - strand, within AO353_00590 at 126.057 kb on - strand, within AO353_00590 at 126.057 kb on - strand, within AO353_00590 at 126.057 kb on - strand, within AO353_00590 at 126.057 kb on - strand, within AO353_00590 at 126.254 kb on + strand, within AO353_00590 at 126.255 kb on - strand, within AO353_00590 at 126.255 kb on - strand, within AO353_00590 at 126.255 kb on - strand, within AO353_00590 at 126.377 kb on + strand, within AO353_00590 at 126.378 kb on - strand, within AO353_00590 at 126.449 kb on + strand at 126.450 kb on - strand at 126.513 kb on + strand at 126.513 kb on + strand at 126.513 kb on + strand at 126.514 kb on - strand at 126.514 kb on - strand at 126.514 kb on - strand at 126.518 kb on - strand at 126.720 kb on + strand at 126.720 kb on + strand at 126.720 kb on + strand at 126.721 kb on - strand at 126.850 kb on + strand, within AO353_00600 at 126.850 kb on + strand, within AO353_00600 at 126.851 kb on - strand, within AO353_00600 at 126.851 kb on - strand, within AO353_00600 at 126.851 kb on - strand, within AO353_00600 at 126.851 kb on - strand, within AO353_00600 at 126.851 kb on - strand, within AO353_00600 at 126.851 kb on - strand, within AO353_00600 at 126.851 kb on - strand, within AO353_00600 at 126.851 kb on - strand, within AO353_00600 at 126.957 kb on - strand at 126.957 kb on - strand, within AO353_00600 at 126.957 kb on - strand, within AO353_00600 at 127.043 kb on - strand, within AO353_00600 at 127.043 kb on - strand, within AO353_00600 at 127.277 kb on + strand, within AO353_00600 at 127.277 kb on + strand, within AO353_00600 at 127.277 kb on + strand, within AO353_00600 at 127.277 kb on + strand, within AO353_00600 at 127.278 kb on - strand, within AO353_00600 at 127.278 kb on - strand, within AO353_00600 at 127.278 kb on - strand, within AO353_00600 at 127.278 kb on - strand, within AO353_00600 at 127.278 kb on - strand, within AO353_00600 at 127.312 kb on + strand, within AO353_00600 at 127.312 kb on + strand, within AO353_00600 at 127.312 kb on + strand, within AO353_00600 at 127.312 kb on + strand, within AO353_00600 at 127.312 kb on + strand, within AO353_00600 at 127.313 kb on - strand, within AO353_00600 at 127.313 kb on - strand, within AO353_00600 at 127.404 kb on - strand, within AO353_00600 at 127.480 kb on + strand, within AO353_00600 at 127.480 kb on + strand, within AO353_00600 at 127.480 kb on + strand, within AO353_00600 at 127.591 kb on + strand at 127.591 kb on + strand at 127.592 kb on - strand at 127.592 kb on - strand at 127.592 kb on - strand at 127.592 kb on - strand at 127.592 kb on - strand at 127.592 kb on - strand at 127.592 kb on - strand at 127.597 kb on + strand at 127.597 kb on + strand at 127.597 kb on + strand at 127.597 kb on + strand at 127.597 kb on + strand at 127.597 kb on + strand at 127.597 kb on + strand at 127.598 kb on - strand at 127.598 kb on - strand at 127.598 kb on - strand at 127.598 kb on - strand at 127.598 kb on - strand at 127.598 kb on - strand at 127.654 kb on + strand at 127.654 kb on + strand at 127.654 kb on + strand at 127.769 kb on + strand at 127.769 kb on + strand at 127.817 kb on + strand at 127.817 kb on + strand at 127.818 kb on - strand at 127.866 kb on + strand at 127.866 kb on + strand at 127.867 kb on - strand at 127.867 kb on - strand at 127.930 kb on + strand at 127.931 kb on - strand at 127.931 kb on - strand at 127.999 kb on - strand at 128.086 kb on + strand at 128.086 kb on + strand at 128.109 kb on + strand at 128.110 kb on - strand at 128.112 kb on + strand at 128.112 kb on + strand at 128.112 kb on + strand at 128.112 kb on + strand at 128.113 kb on - strand at 128.121 kb on + strand at 128.167 kb on + strand at 128.167 kb on + strand at 128.169 kb on + strand at 128.170 kb on - strand at 128.170 kb on - strand at 128.173 kb on + strand at 128.173 kb on + strand at 128.174 kb on - strand at 128.174 kb on - strand at 128.175 kb on + strand at 128.175 kb on + strand at 128.176 kb on - strand at 128.176 kb on - strand at 128.374 kb on + strand, within AO353_00605 at 128.378 kb on - strand, within AO353_00605 at 128.614 kb on + strand, within AO353_00605 at 128.614 kb on + strand, within AO353_00605 at 128.615 kb on - strand, within AO353_00605 at 128.615 kb on - strand, within AO353_00605 at 128.632 kb on + strand, within AO353_00605
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 125,708 - AO353_00585 0.88 -0.4 125,708 - AO353_00585 0.88 -0.9 125,746 + -1.1 125,746 + -0.4 125,746 + -1.1 125,747 - -1.5 125,747 - -0.3 125,803 + +0.5 125,803 + -0.3 125,803 + -0.6 125,804 - -1.0 125,804 - -1.3 125,804 - -0.6 125,804 - -0.6 126,023 + AO353_00590 0.23 -1.3 126,023 + AO353_00590 0.23 -2.4 126,023 + AO353_00590 0.23 -0.9 126,024 - AO353_00590 0.23 -0.0 126,024 - AO353_00590 0.23 +2.4 126,056 + AO353_00590 0.29 -0.3 126,056 + AO353_00590 0.29 -0.5 126,056 + AO353_00590 0.29 -0.5 126,057 - AO353_00590 0.29 -0.3 126,057 - AO353_00590 0.29 +0.1 126,057 - AO353_00590 0.29 +0.1 126,057 - AO353_00590 0.29 -0.5 126,057 - AO353_00590 0.29 -2.0 126,057 - AO353_00590 0.29 -1.6 126,254 + AO353_00590 0.61 -1.7 126,255 - AO353_00590 0.61 +0.5 126,255 - AO353_00590 0.61 -1.0 126,255 - AO353_00590 0.61 -1.8 126,377 + AO353_00590 0.81 -0.9 126,378 - AO353_00590 0.81 +0.2 126,449 + -1.3 126,450 - -0.2 126,513 + +1.1 126,513 + -0.4 126,513 + +0.9 126,514 - +1.0 126,514 - +0.3 126,514 - -0.6 126,518 - +0.1 126,720 + -2.5 126,720 + +0.7 126,720 + -1.6 126,721 - -1.0 126,850 + AO353_00600 0.15 -0.3 126,850 + AO353_00600 0.15 +0.5 126,851 - AO353_00600 0.16 +1.0 126,851 - AO353_00600 0.16 -1.3 126,851 - AO353_00600 0.16 -2.2 126,851 - AO353_00600 0.16 -1.5 126,851 - AO353_00600 0.16 +0.2 126,851 - AO353_00600 0.16 -1.3 126,851 - AO353_00600 0.16 +0.3 126,851 - AO353_00600 0.16 +1.5 126,957 - -0.8 126,957 - AO353_00600 0.27 -2.0 126,957 - AO353_00600 0.27 -2.3 127,043 - AO353_00600 0.36 -1.3 127,043 - AO353_00600 0.36 -2.2 127,277 + AO353_00600 0.60 -2.5 127,277 + AO353_00600 0.60 -1.0 127,277 + AO353_00600 0.60 -0.8 127,277 + AO353_00600 0.60 +1.1 127,278 - AO353_00600 0.60 -1.8 127,278 - AO353_00600 0.60 -2.2 127,278 - AO353_00600 0.60 -0.6 127,278 - AO353_00600 0.60 -2.5 127,278 - AO353_00600 0.60 +0.4 127,312 + AO353_00600 0.64 -0.4 127,312 + AO353_00600 0.64 -1.2 127,312 + AO353_00600 0.64 -0.3 127,312 + AO353_00600 0.64 -2.5 127,312 + AO353_00600 0.64 -0.8 127,313 - AO353_00600 0.64 +0.2 127,313 - AO353_00600 0.64 -0.2 127,404 - AO353_00600 0.73 -1.6 127,480 + AO353_00600 0.81 +0.7 127,480 + AO353_00600 0.81 -1.5 127,480 + AO353_00600 0.81 -2.0 127,591 + -1.0 127,591 + -0.6 127,592 - -2.5 127,592 - -1.2 127,592 - -1.8 127,592 - -1.5 127,592 - -0.8 127,592 - -0.2 127,592 - +0.5 127,597 + -1.3 127,597 + -1.0 127,597 + -1.0 127,597 + +0.4 127,597 + -0.4 127,597 + +0.1 127,597 + -2.0 127,598 - -1.9 127,598 - +0.4 127,598 - +1.1 127,598 - -0.6 127,598 - -0.3 127,598 - +0.5 127,654 + -2.0 127,654 + -0.0 127,654 + -0.3 127,769 + +0.1 127,769 + -2.3 127,817 + +1.3 127,817 + -0.8 127,818 - -2.2 127,866 + +0.6 127,866 + +0.1 127,867 - -2.5 127,867 - -0.0 127,930 + -0.6 127,931 - -0.5 127,931 - +0.2 127,999 - -1.0 128,086 + +0.8 128,086 + +1.5 128,109 + +0.4 128,110 - +0.7 128,112 + -1.4 128,112 + +0.3 128,112 + -2.0 128,112 + +1.0 128,113 - -1.8 128,121 + +0.2 128,167 + +0.1 128,167 + +1.1 128,169 + -0.3 128,170 - +0.3 128,170 - -2.4 128,173 + -1.4 128,173 + +0.5 128,174 - -0.8 128,174 - +1.2 128,175 + +0.5 128,175 + -1.5 128,176 - -2.0 128,176 - -0.2 128,374 + AO353_00605 0.16 -2.8 128,378 - AO353_00605 0.16 -0.6 128,614 + AO353_00605 0.33 +0.7 128,614 + AO353_00605 0.33 -1.8 128,615 - AO353_00605 0.33 +1.1 128,615 - AO353_00605 0.33 -1.3 128,632 + AO353_00605 0.34 -0.5
Or see this region's nucleotide sequence