Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5930

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
6,749,055	-				-0.6
6,749,106	+				+0.7
6,749,107	-				+1.2
6,749,107	-				-0.5
6,749,228	+				+0.7
6,749,228	+				-1.3
6,749,407	-		Pf6N2E2_5929	0.15	-1.0
6,749,407	-		Pf6N2E2_5929	0.15	-1.9
6,749,407	-		Pf6N2E2_5929	0.15	-1.0
6,749,407	-		Pf6N2E2_5929	0.15	-0.5
6,749,574	+		Pf6N2E2_5929	0.59	-1.9
6,749,574	+		Pf6N2E2_5929	0.59	+1.7
6,749,574	+		Pf6N2E2_5929	0.59	-0.4
6,749,575	-		Pf6N2E2_5929	0.59	-0.6
6,749,575	-		Pf6N2E2_5929	0.59	-0.9
6,749,575	-		Pf6N2E2_5929	0.59	-1.6
6,749,575	-		Pf6N2E2_5929	0.59	-3.3
6,749,575	-		Pf6N2E2_5929	0.59	-0.4
6,749,575	-		Pf6N2E2_5929	0.59	-2.0
6,749,575	-		Pf6N2E2_5929	0.59	-1.0
6,749,809	+				-0.7
6,749,809	+				-2.1
6,749,809	+				-0.9
6,749,809	+				-2.7
6,749,809	+				-0.1
6,749,810	-				+0.7
6,749,841	+				-0.7
6,749,842	-				-1.6
6,749,842	-				-0.4
6,749,842	-				-0.3
6,749,842	-				-2.4
6,749,866	+				-0.6
6,749,894	-				+0.3
6,749,905	+				+0.7
6,749,905	+				-0.6
6,749,906	-				+0.0
6,749,906	-				-0.3
6,749,906	-				+0.6
6,749,906	-				+0.1
6,749,906	-				+0.2
6,749,906	-				-0.5
6,749,918	+				-0.4
6,749,952	+				-0.7
6,749,978	+				-1.3
6,749,978	+				-0.8
6,749,978	+				+0.1
6,750,024	+				-1.7
6,750,138	-				-1.3
6,750,138	-				+2.3
6,750,372	+		Pf6N2E2_5930	0.16	-2.1
6,750,373	-		Pf6N2E2_5930	0.16	+0.2
6,750,449	+		Pf6N2E2_5930	0.19	+0.0
6,750,449	+		Pf6N2E2_5930	0.19	-0.4
6,750,450	-		Pf6N2E2_5930	0.20	-0.3
6,750,450	-		Pf6N2E2_5930	0.20	+1.3
6,750,722	+		Pf6N2E2_5930	0.32	+0.1
6,750,722	+		Pf6N2E2_5930	0.32	-0.6
6,750,722	+		Pf6N2E2_5930	0.32	-0.9
6,750,722	+		Pf6N2E2_5930	0.32	-0.3
6,750,722	+		Pf6N2E2_5930	0.32	+1.6
6,750,821	+		Pf6N2E2_5930	0.36	-1.2
6,751,018	-		Pf6N2E2_5930	0.45	-1.6
6,751,194	+		Pf6N2E2_5930	0.53	-1.3
6,751,195	-		Pf6N2E2_5930	0.53	+1.1
6,751,240	+		Pf6N2E2_5930	0.55	+0.3
6,751,241	-		Pf6N2E2_5930	0.55	-0.9
6,751,287	+		Pf6N2E2_5930	0.57	-1.0
6,751,287	+		Pf6N2E2_5930	0.57	+0.1
6,751,288	-		Pf6N2E2_5930	0.57	-0.0
6,751,419	+		Pf6N2E2_5930	0.63	+0.3
6,751,419	+		Pf6N2E2_5930	0.63	-0.1
6,751,420	-		Pf6N2E2_5930	0.63	-0.0
6,751,449	+		Pf6N2E2_5930	0.64	-2.0
6,751,449	+		Pf6N2E2_5930	0.64	+1.7
6,751,450	-		Pf6N2E2_5930	0.64	+1.0
6,751,556	+		Pf6N2E2_5930	0.69	-1.4
6,751,557	-		Pf6N2E2_5930	0.69	-0.8
6,752,130	+				+0.7
6,752,131	-				+0.7
6,752,132	+				+0.0
6,752,132	+				+0.1
6,752,132	+				-0.2
6,752,132	+				+0.4
6,752,132	+				+1.7
6,752,132	+				+0.2
6,752,132	+				-1.0
6,752,132	+				+1.4
6,752,133	-				-0.1
6,752,133	-				+0.0
6,752,133	-				-0.9
6,752,133	-				+0.2
6,752,133	-				-0.9
6,752,133	-				-1.4
6,752,133	-				-1.0
6,752,133	-				-1.1
6,752,133	-				+0.4
6,752,253	-				+0.2
6,752,670	+		Pf6N2E2_5931	0.50	-1.1
6,752,670	+		Pf6N2E2_5931	0.50	-0.6