Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4157

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
4,838,437	+		Pf6N2E2_4156	0.52	-0.5
4,838,437	+		Pf6N2E2_4156	0.52	+0.1
4,838,577	+		Pf6N2E2_4156	0.59	-0.8
4,838,578	-		Pf6N2E2_4156	0.59	-1.3
4,838,578	-		Pf6N2E2_4156	0.59	+0.7
4,839,186	+		Pf6N2E2_4156	0.88	-0.1
4,839,387	-				-1.4
4,839,397	+				+0.2
4,839,397	+				-0.3
4,839,397	+				+1.5
4,839,397	+				+0.5
4,839,398	-				-0.1
4,839,398	-				-0.3
4,839,398	-				-0.8
4,839,398	-				-0.7
4,839,398	-				+0.3
4,839,398	-				-1.3
4,839,753	+		Pf6N2E2_4157	0.37	-0.3
4,839,754	-		Pf6N2E2_4157	0.37	-1.4
4,839,967	-		Pf6N2E2_4157	0.61	+0.4
4,839,967	-		Pf6N2E2_4157	0.61	-2.7
4,839,967	-		Pf6N2E2_4157	0.61	-0.2
4,840,017	+		Pf6N2E2_4157	0.67	-0.9
4,840,017	+		Pf6N2E2_4157	0.67	-0.8
4,840,152	+		Pf6N2E2_4157	0.82	-0.8
4,840,152	+		Pf6N2E2_4157	0.82	-1.0
4,840,152	+		Pf6N2E2_4157	0.82	-0.3
4,840,153	-		Pf6N2E2_4157	0.82	-3.2
4,840,153	-		Pf6N2E2_4157	0.82	+0.0
4,840,323	+				-1.3
4,840,323	+				-0.4
4,840,323	+				+1.0
4,840,323	+				-1.2
4,840,323	+				+0.1
4,840,324	-				-0.2
4,840,324	-				-0.5
4,840,324	-				+1.3
4,840,324	-				+1.2
4,840,324	-				+0.1
4,840,969	-				+1.0
4,840,969	-				-1.1
4,840,969	-				-0.3
4,841,008	-				+1.8
4,841,008	-				-0.2
4,841,008	-				-0.8
4,841,037	+				+0.2
4,841,038	-				+0.2
4,841,038	-				-0.5
4,841,133	+				-0.2
4,841,133	+				+0.3
4,841,133	+				-0.7
4,841,133	+				+0.5
4,841,133	+				+1.3
4,841,133	+				-0.2
4,841,133	+				-0.6
4,841,133	+				+0.4
4,841,133	+				+0.0
4,841,133	+				+0.9
4,841,133	+				-1.4
4,841,133	+				-0.7
4,841,134	-				-0.3
4,841,134	-				+0.0
4,841,134	-				-0.6
4,841,134	-				+0.5
4,841,134	-				-0.1
4,841,134	-				+0.1
4,841,134	-				-0.9
4,841,134	-				-0.3
4,841,134	-				+0.2
4,841,134	-				-0.7
4,841,134	-				-1.4
4,841,181	+				+0.9
4,841,182	-				-1.5
4,841,304	-		Pf6N2E2_4159	0.23	-2.9
4,841,304	-		Pf6N2E2_4159	0.23	-1.6
4,841,304	-		Pf6N2E2_4159	0.23	-1.0