Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3599

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
4,187,796	-		Pf6N2E2_3596	0.86	-1.7
4,187,960	+				+0.2
4,187,960	+				-0.2
4,187,960	+				-0.6
4,187,961	-				-1.4
4,187,961	-				+0.4
4,187,961	-				-0.4
4,187,965	-				+0.4
4,187,965	-				-0.0
4,188,023	+				-0.3
4,188,023	+				-0.0
4,188,114	+				-1.1
4,188,193	-		Pf6N2E2_3597	0.51	+0.2
4,188,193	-		Pf6N2E2_3597	0.51	-2.3
4,188,193	-		Pf6N2E2_3597	0.51	-1.6
4,188,193	-		Pf6N2E2_3597	0.51	-0.7
4,188,193	-		Pf6N2E2_3597	0.51	+0.4
4,188,193	-		Pf6N2E2_3597	0.51	+0.1
4,188,227	+		Pf6N2E2_3597	0.80	-1.2
4,188,239	+				-0.7
4,188,239	+				+0.8
4,188,239	+				+0.3
4,188,239	+				-1.4
4,188,240	-				-1.2
4,188,240	-				+0.3
4,188,240	-				+1.0
4,188,240	-				-0.4
4,188,248	-				-0.0
4,188,290	+				+1.7
4,188,290	+				+0.6
4,188,290	+				+0.4
4,188,290	+				+0.1
4,188,290	+				+0.1
4,188,290	+				-0.1
4,188,290	+				+0.3
4,188,291	-				+0.3
4,188,291	-				+0.4
4,188,291	-				+2.5
4,188,291	-				-0.6
4,188,796	+				+0.1
4,188,797	-				-1.1
4,188,797	-				-0.2
4,188,797	-				-0.4
4,188,797	-				+0.1
4,188,797	-				-0.1
4,188,797	-				+0.0
4,188,928	-		Pf6N2E2_3599	0.16	+0.3
4,188,986	+		Pf6N2E2_3599	0.23	-0.0
4,188,987	-		Pf6N2E2_3599	0.23	-0.1
4,189,073	+		Pf6N2E2_3599	0.32	+0.8
4,189,162	+		Pf6N2E2_3599	0.42	-2.1
4,189,268	+		Pf6N2E2_3599	0.53	+1.3
4,189,268	+		Pf6N2E2_3599	0.53	-0.3
4,189,268	+		Pf6N2E2_3599	0.53	-0.6
4,189,268	+		Pf6N2E2_3599	0.53	+0.1
4,189,270	+		Pf6N2E2_3599	0.54	+0.1
4,189,336	-		Pf6N2E2_3599	0.61	-0.0
4,189,336	-		Pf6N2E2_3599	0.61	+1.3
4,189,456	+		Pf6N2E2_3599	0.74	-0.8
4,189,457	-		Pf6N2E2_3599	0.74	-0.9
4,189,530	+		Pf6N2E2_3599	0.82	-0.3
4,189,530	+		Pf6N2E2_3599	0.82	+0.6
4,189,530	+		Pf6N2E2_3599	0.82	-1.1
4,189,531	-		Pf6N2E2_3599	0.82	+0.3
4,189,531	-		Pf6N2E2_3599	0.82	-0.9
4,189,531	-		Pf6N2E2_3599	0.82	-0.3
4,189,552	+		Pf6N2E2_3599	0.84	-0.0
4,189,553	-		Pf6N2E2_3599	0.84	+0.4
4,189,553	-		Pf6N2E2_3599	0.84	-0.1
4,189,553	-		Pf6N2E2_3599	0.84	-1.6
4,189,553	-		Pf6N2E2_3599	0.84	+0.1
4,189,553	-		Pf6N2E2_3599	0.84	+0.2
4,189,697	+				+0.9
4,189,697	+				-2.3
4,189,698	-				-0.5
4,189,698	-				+0.3
4,189,698	-				-0.5
4,189,744	+				-0.3
4,189,744	+				-0.9
4,189,744	+				-1.3
4,189,744	+				+1.6
4,189,744	+				+0.0
4,189,745	-				-2.1
4,189,745	-				+0.0
4,189,745	-				-0.8
4,189,745	-				-1.3
4,189,789	+				-0.7
4,189,789	+				+0.3
4,189,790	-				-0.0
4,189,883	+				+0.5
4,190,223	-		Pf6N2E2_3600	0.11	+0.7
4,190,223	-		Pf6N2E2_3600	0.11	+0.2
4,190,223	-		Pf6N2E2_3600	0.11	+0.8
4,190,411	+		Pf6N2E2_3600	0.19	-0.5
4,190,411	+		Pf6N2E2_3600	0.19	-1.8
4,190,411	+		Pf6N2E2_3600	0.19	-0.6
4,190,411	+		Pf6N2E2_3600	0.19	+0.2
4,190,411	+		Pf6N2E2_3600	0.19	-1.0
4,190,411	+		Pf6N2E2_3600	0.19	-0.1
4,190,412	-		Pf6N2E2_3600	0.19	+0.0
4,190,412	-		Pf6N2E2_3600	0.19	-0.5
4,190,447	+		Pf6N2E2_3600	0.21	+0.3
4,190,447	+		Pf6N2E2_3600	0.21	-1.1
4,190,447	+		Pf6N2E2_3600	0.21	+0.1
4,190,447	+		Pf6N2E2_3600	0.21	-0.1
4,190,448	-		Pf6N2E2_3600	0.21	+1.3
4,190,448	-		Pf6N2E2_3600	0.21	+1.5
4,190,448	-		Pf6N2E2_3600	0.21	+0.5
4,190,594	+		Pf6N2E2_3600	0.27	-0.4
4,190,595	-		Pf6N2E2_3600	0.27	-0.4
4,190,621	+		Pf6N2E2_3600	0.28	+0.9
4,190,621	+		Pf6N2E2_3600	0.28	+1.1
4,190,621	+		Pf6N2E2_3600	0.28	+1.0
4,190,621	+		Pf6N2E2_3600	0.28	+0.4
4,190,622	-		Pf6N2E2_3600	0.28	+0.7
4,190,622	-		Pf6N2E2_3600	0.28	+0.3
4,190,622	-		Pf6N2E2_3600	0.28	-1.3
4,190,651	+		Pf6N2E2_3600	0.29	+0.0
4,190,651	+		Pf6N2E2_3600	0.29	-0.1
4,190,652	-		Pf6N2E2_3600	0.29	+0.5
4,190,652	-		Pf6N2E2_3600	0.29	-1.4
4,190,652	-		Pf6N2E2_3600	0.29	+1.7
4,190,652	-		Pf6N2E2_3600	0.29	-1.8