Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1801

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
2,129,774	-		Pf6N2E2_1799	0.83	-0.7
2,129,774	-		Pf6N2E2_1799	0.83	-0.2
2,129,791	+		Pf6N2E2_1799	0.85	-0.3
2,129,792	-		Pf6N2E2_1799	0.85	+0.0
2,129,972	+				+1.4
2,129,972	+				-0.5
2,129,973	-				-0.9
2,129,973	-				-0.6
2,130,648	+				+0.4
2,130,648	+				+2.1
2,130,648	+				-0.4
2,130,648	+				+0.2
2,130,648	+				+0.2
2,130,698	+				+0.2
2,130,699	-				-0.4
2,130,917	+		Pf6N2E2_1801	0.21	+0.3
2,130,918	-		Pf6N2E2_1801	0.22	+0.6
2,130,918	-		Pf6N2E2_1801	0.22	-0.9
2,130,918	-		Pf6N2E2_1801	0.22	+0.1
2,131,083	-		Pf6N2E2_1801	0.42	-1.7
2,131,106	+		Pf6N2E2_1801	0.44	+0.4
2,131,107	-		Pf6N2E2_1801	0.44	-0.2
2,131,107	-		Pf6N2E2_1801	0.44	-1.0
2,131,370	+		Pf6N2E2_1801	0.76	+1.2
2,131,370	+		Pf6N2E2_1801	0.76	-0.6
2,131,370	+		Pf6N2E2_1801	0.76	-0.3
2,131,370	+		Pf6N2E2_1801	0.76	-1.0
2,131,370	+		Pf6N2E2_1801	0.76	-0.4
2,131,370	+		Pf6N2E2_1801	0.76	+0.1
2,131,371	-		Pf6N2E2_1801	0.76	-0.7
2,131,371	-		Pf6N2E2_1801	0.76	-1.0
2,131,371	-		Pf6N2E2_1801	0.76	-0.8
2,131,371	-		Pf6N2E2_1801	0.76	+0.7
2,131,678	+				+0.0
2,131,678	+				+0.3
2,131,679	-				-0.4
2,131,687	+				+0.6
2,131,688	-				+0.2
2,131,688	-				-0.0
2,131,688	-				-0.1
2,131,751	+				+1.9
2,131,751	+				+0.8
2,131,752	-				-0.0
2,131,838	+		Pf6N2E2_1802	0.14	-0.6
2,131,945	-		Pf6N2E2_1802	0.27	+1.4
2,132,176	+		Pf6N2E2_1802	0.54	-1.3
2,132,177	-		Pf6N2E2_1802	0.54	-0.4
2,132,181	-		Pf6N2E2_1802	0.55	-0.0
2,132,214	-		Pf6N2E2_1802	0.59	-0.2
2,132,282	+		Pf6N2E2_1802	0.67	+1.0
2,132,298	-		Pf6N2E2_1802	0.69	+0.3
2,132,298	-		Pf6N2E2_1802	0.69	+0.6
2,132,403	+		Pf6N2E2_1802	0.81	+0.2
2,132,502	+				+0.3