Experiment: 4C survival; 1152 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23925 and AO356_23930 are separated by 331 nucleotides AO356_23930 and AO356_23935 are separated by 88 nucleotides
AO356_23925: AO356_23925 - mRNA 3'-end processing factor, at 5,364,525 to 5,365,880
_23925
AO356_23930: AO356_23930 - molecular chaperone Hsp20, at 5,366,212 to 5,366,751
_23930
AO356_23935: AO356_23935 - arginine-ornithine antiporter, at 5,366,840 to 5,368,333
_23935
Position (kb) 5366
5367 Strain fitness (log2 ratio) -1
0
1 at 5365.288 kb on - strand, within AO356_23925 at 5365.330 kb on - strand, within AO356_23925 at 5365.330 kb on - strand, within AO356_23925 at 5365.368 kb on + strand, within AO356_23925 at 5365.770 kb on + strand at 5365.770 kb on + strand at 5365.770 kb on + strand at 5365.770 kb on + strand at 5365.770 kb on + strand at 5365.771 kb on - strand at 5365.771 kb on - strand at 5365.771 kb on - strand at 5365.771 kb on - strand at 5365.988 kb on - strand at 5366.904 kb on - strand at 5366.967 kb on + strand at 5366.989 kb on - strand at 5367.012 kb on + strand, within AO356_23935 at 5367.049 kb on - strand, within AO356_23935 at 5367.109 kb on - strand, within AO356_23935 at 5367.141 kb on + strand, within AO356_23935 at 5367.142 kb on - strand, within AO356_23935 at 5367.142 kb on - strand, within AO356_23935 at 5367.159 kb on + strand, within AO356_23935 at 5367.205 kb on - strand, within AO356_23935 at 5367.410 kb on - strand, within AO356_23935 at 5367.452 kb on + strand, within AO356_23935 at 5367.519 kb on - strand, within AO356_23935 at 5367.519 kb on - strand, within AO356_23935 at 5367.611 kb on + strand, within AO356_23935
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 1152 hrs remove 5,365,288 - AO356_23925 0.56 -0.1 5,365,330 - AO356_23925 0.59 +1.0 5,365,330 - AO356_23925 0.59 -0.7 5,365,368 + AO356_23925 0.62 -0.8 5,365,770 + -0.0 5,365,770 + +0.6 5,365,770 + +0.7 5,365,770 + +0.9 5,365,770 + +0.0 5,365,771 - +1.1 5,365,771 - -0.4 5,365,771 - -0.2 5,365,771 - -1.2 5,365,988 - -1.0 5,366,904 - -0.6 5,366,967 + +1.1 5,366,989 - +0.2 5,367,012 + AO356_23935 0.12 -0.3 5,367,049 - AO356_23935 0.14 -0.3 5,367,109 - AO356_23935 0.18 +0.3 5,367,141 + AO356_23935 0.20 +0.0 5,367,142 - AO356_23935 0.20 -0.9 5,367,142 - AO356_23935 0.20 +0.1 5,367,159 + AO356_23935 0.21 +0.0 5,367,205 - AO356_23935 0.24 +1.1 5,367,410 - AO356_23935 0.38 +1.1 5,367,452 + AO356_23935 0.41 +0.9 5,367,519 - AO356_23935 0.45 -0.2 5,367,519 - AO356_23935 0.45 +0.4 5,367,611 + AO356_23935 0.52 -0.1
Or see this region's nucleotide sequence