Experiment: 4C survival; 1152 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04495 and AO356_04500 are separated by 270 nucleotides AO356_04500 and AO356_04505 are separated by 373 nucleotides AO356_04505 and AO356_04510 are separated by 130 nucleotides AO356_04510 and AO356_04515 are separated by 83 nucleotides
AO356_04495: AO356_04495 - short-chain dehydrogenase, at 1,017,253 to 1,017,528
_04495
AO356_04500: AO356_04500 - addiction module antitoxin, at 1,017,799 to 1,018,107
_04500
AO356_04505: AO356_04505 - hypothetical protein, at 1,018,481 to 1,019,590
_04505
AO356_04510: AO356_04510 - tRNA-Ser, at 1,019,721 to 1,019,810
_04510
AO356_04515: AO356_04515 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 1,019,894 to 1,020,607
_04515
Position (kb)
1018
1019
1020 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1017.526 kb on + strand at 1017.526 kb on + strand at 1017.527 kb on - strand at 1017.527 kb on - strand at 1017.527 kb on - strand at 1017.537 kb on + strand at 1017.537 kb on + strand at 1017.537 kb on + strand at 1017.537 kb on + strand at 1017.544 kb on - strand at 1017.663 kb on + strand at 1017.677 kb on + strand at 1017.678 kb on - strand at 1017.678 kb on - strand at 1017.678 kb on - strand at 1017.678 kb on - strand at 1017.699 kb on + strand at 1017.699 kb on + strand at 1017.699 kb on + strand at 1017.699 kb on + strand at 1017.730 kb on + strand at 1017.730 kb on + strand at 1017.730 kb on + strand at 1017.730 kb on + strand at 1017.731 kb on - strand at 1017.731 kb on - strand at 1017.788 kb on + strand at 1017.854 kb on - strand, within AO356_04500 at 1017.874 kb on + strand, within AO356_04500 at 1017.874 kb on + strand, within AO356_04500 at 1017.875 kb on - strand, within AO356_04500 at 1017.917 kb on + strand, within AO356_04500 at 1017.917 kb on + strand, within AO356_04500 at 1017.917 kb on + strand, within AO356_04500 at 1017.917 kb on + strand, within AO356_04500 at 1017.918 kb on - strand, within AO356_04500 at 1017.918 kb on - strand, within AO356_04500 at 1017.918 kb on - strand, within AO356_04500 at 1017.918 kb on - strand, within AO356_04500 at 1017.979 kb on + strand, within AO356_04500 at 1017.979 kb on + strand, within AO356_04500 at 1017.979 kb on + strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.980 kb on - strand, within AO356_04500 at 1017.983 kb on + strand, within AO356_04500 at 1017.984 kb on - strand, within AO356_04500 at 1018.040 kb on + strand, within AO356_04500 at 1018.040 kb on + strand, within AO356_04500 at 1018.041 kb on - strand, within AO356_04500 at 1018.041 kb on - strand, within AO356_04500 at 1018.070 kb on - strand, within AO356_04500 at 1018.070 kb on - strand, within AO356_04500 at 1018.180 kb on + strand at 1018.181 kb on - strand at 1018.181 kb on - strand at 1018.181 kb on - strand at 1018.215 kb on - strand at 1018.215 kb on - strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.234 kb on + strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.235 kb on - strand at 1018.315 kb on + strand at 1018.342 kb on + strand at 1018.342 kb on + strand at 1018.342 kb on + strand at 1018.342 kb on + strand at 1018.343 kb on - strand at 1018.343 kb on - strand at 1018.468 kb on - strand at 1018.515 kb on + strand at 1018.561 kb on + strand at 1018.575 kb on - strand at 1018.575 kb on - strand at 1018.583 kb on + strand at 1018.629 kb on - strand, within AO356_04505 at 1018.663 kb on + strand, within AO356_04505 at 1018.747 kb on + strand, within AO356_04505 at 1018.768 kb on + strand, within AO356_04505 at 1018.780 kb on + strand, within AO356_04505 at 1018.827 kb on + strand, within AO356_04505 at 1018.828 kb on - strand, within AO356_04505 at 1018.828 kb on - strand, within AO356_04505 at 1018.866 kb on + strand, within AO356_04505 at 1018.886 kb on + strand, within AO356_04505 at 1018.886 kb on + strand, within AO356_04505 at 1018.886 kb on + strand, within AO356_04505 at 1018.886 kb on + strand, within AO356_04505 at 1018.887 kb on - strand, within AO356_04505 at 1018.905 kb on + strand, within AO356_04505 at 1018.906 kb on - strand, within AO356_04505 at 1018.906 kb on - strand, within AO356_04505 at 1018.906 kb on - strand, within AO356_04505 at 1018.909 kb on - strand, within AO356_04505 at 1018.930 kb on + strand, within AO356_04505 at 1018.930 kb on + strand, within AO356_04505 at 1018.931 kb on - strand, within AO356_04505 at 1018.931 kb on - strand, within AO356_04505 at 1018.959 kb on + strand, within AO356_04505 at 1018.959 kb on + strand, within AO356_04505 at 1018.959 kb on + strand, within AO356_04505 at 1018.960 kb on - strand, within AO356_04505 at 1018.960 kb on - strand, within AO356_04505 at 1018.960 kb on - strand, within AO356_04505 at 1019.032 kb on - strand, within AO356_04505 at 1019.032 kb on - strand, within AO356_04505 at 1019.063 kb on + strand, within AO356_04505 at 1019.066 kb on - strand, within AO356_04505 at 1019.066 kb on - strand, within AO356_04505 at 1019.066 kb on - strand, within AO356_04505 at 1019.066 kb on - strand, within AO356_04505 at 1019.087 kb on + strand, within AO356_04505 at 1019.087 kb on + strand, within AO356_04505 at 1019.088 kb on - strand, within AO356_04505 at 1019.088 kb on - strand, within AO356_04505 at 1019.088 kb on - strand, within AO356_04505 at 1019.088 kb on - strand, within AO356_04505 at 1019.104 kb on + strand, within AO356_04505 at 1019.108 kb on + strand, within AO356_04505 at 1019.108 kb on + strand, within AO356_04505 at 1019.109 kb on - strand, within AO356_04505 at 1019.110 kb on + strand, within AO356_04505 at 1019.164 kb on + strand, within AO356_04505 at 1019.164 kb on + strand, within AO356_04505 at 1019.165 kb on - strand, within AO356_04505 at 1019.198 kb on + strand, within AO356_04505 at 1019.198 kb on + strand, within AO356_04505 at 1019.199 kb on - strand, within AO356_04505 at 1019.226 kb on + strand, within AO356_04505 at 1019.227 kb on - strand, within AO356_04505 at 1019.252 kb on - strand, within AO356_04505 at 1019.303 kb on + strand, within AO356_04505 at 1019.303 kb on + strand, within AO356_04505 at 1019.303 kb on + strand, within AO356_04505 at 1019.304 kb on - strand, within AO356_04505 at 1019.304 kb on - strand, within AO356_04505 at 1019.399 kb on + strand, within AO356_04505 at 1019.400 kb on - strand, within AO356_04505 at 1019.401 kb on + strand, within AO356_04505 at 1019.401 kb on + strand, within AO356_04505 at 1019.401 kb on + strand, within AO356_04505 at 1019.401 kb on + strand, within AO356_04505 at 1019.402 kb on - strand, within AO356_04505 at 1019.402 kb on - strand, within AO356_04505 at 1019.402 kb on - strand, within AO356_04505 at 1019.402 kb on - strand, within AO356_04505 at 1019.463 kb on - strand, within AO356_04505 at 1019.508 kb on + strand at 1019.508 kb on + strand at 1019.508 kb on + strand at 1019.509 kb on - strand at 1019.511 kb on - strand at 1019.576 kb on - strand at 1019.718 kb on + strand at 1019.875 kb on + strand at 1019.876 kb on - strand at 1019.896 kb on - strand at 1020.277 kb on + strand, within AO356_04515 at 1020.326 kb on - strand, within AO356_04515
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 1152 hrs remove 1,017,526 + -0.6 1,017,526 + +0.3 1,017,527 - -0.7 1,017,527 - -0.9 1,017,527 - -0.1 1,017,537 + +0.8 1,017,537 + -1.0 1,017,537 + -0.2 1,017,537 + +0.7 1,017,544 - -0.5 1,017,663 + -0.4 1,017,677 + -1.1 1,017,678 - +0.7 1,017,678 - -0.6 1,017,678 - -0.7 1,017,678 - +1.3 1,017,699 + +0.8 1,017,699 + -0.1 1,017,699 + -0.7 1,017,699 + +0.1 1,017,730 + -0.3 1,017,730 + -0.1 1,017,730 + +0.2 1,017,730 + +0.8 1,017,731 - +0.9 1,017,731 - -0.7 1,017,788 + +0.6 1,017,854 - AO356_04500 0.18 -0.9 1,017,874 + AO356_04500 0.24 -0.2 1,017,874 + AO356_04500 0.24 -1.6 1,017,875 - AO356_04500 0.25 +0.9 1,017,917 + AO356_04500 0.38 -0.1 1,017,917 + AO356_04500 0.38 +0.1 1,017,917 + AO356_04500 0.38 -0.2 1,017,917 + AO356_04500 0.38 -0.9 1,017,918 - AO356_04500 0.39 -0.4 1,017,918 - AO356_04500 0.39 -0.4 1,017,918 - AO356_04500 0.39 +0.8 1,017,918 - AO356_04500 0.39 -0.3 1,017,979 + AO356_04500 0.58 +0.3 1,017,979 + AO356_04500 0.58 -0.4 1,017,979 + AO356_04500 0.58 -0.7 1,017,980 - AO356_04500 0.59 -0.3 1,017,980 - AO356_04500 0.59 +0.1 1,017,980 - AO356_04500 0.59 -0.7 1,017,980 - AO356_04500 0.59 +0.6 1,017,980 - AO356_04500 0.59 -0.1 1,017,980 - AO356_04500 0.59 -0.4 1,017,983 + AO356_04500 0.60 +0.1 1,017,984 - AO356_04500 0.60 +0.6 1,018,040 + AO356_04500 0.78 -0.5 1,018,040 + AO356_04500 0.78 -0.2 1,018,041 - AO356_04500 0.78 +1.3 1,018,041 - AO356_04500 0.78 -0.4 1,018,070 - AO356_04500 0.88 +0.2 1,018,070 - AO356_04500 0.88 -0.6 1,018,180 + -0.4 1,018,181 - +0.7 1,018,181 - +0.5 1,018,181 - +0.4 1,018,215 - -1.0 1,018,215 - +0.2 1,018,234 + -0.8 1,018,234 + -1.2 1,018,234 + +0.0 1,018,234 + +0.3 1,018,234 + -0.5 1,018,234 + -1.3 1,018,235 - +0.1 1,018,235 - +0.6 1,018,235 - -0.0 1,018,235 - -0.2 1,018,235 - -0.0 1,018,235 - +0.7 1,018,315 + -1.4 1,018,342 + -0.4 1,018,342 + +0.3 1,018,342 + +0.1 1,018,342 + +0.2 1,018,343 - +1.1 1,018,343 - -0.4 1,018,468 - -0.4 1,018,515 + +1.0 1,018,561 + +0.1 1,018,575 - -0.6 1,018,575 - +0.3 1,018,583 + +0.5 1,018,629 - AO356_04505 0.13 +0.9 1,018,663 + AO356_04505 0.16 -1.5 1,018,747 + AO356_04505 0.24 +1.0 1,018,768 + AO356_04505 0.26 -1.0 1,018,780 + AO356_04505 0.27 -2.2 1,018,827 + AO356_04505 0.31 -0.2 1,018,828 - AO356_04505 0.31 -0.2 1,018,828 - AO356_04505 0.31 +0.6 1,018,866 + AO356_04505 0.35 +0.5 1,018,886 + AO356_04505 0.36 -0.6 1,018,886 + AO356_04505 0.36 +1.8 1,018,886 + AO356_04505 0.36 -1.3 1,018,886 + AO356_04505 0.36 +0.7 1,018,887 - AO356_04505 0.37 -0.3 1,018,905 + AO356_04505 0.38 -0.7 1,018,906 - AO356_04505 0.38 -0.7 1,018,906 - AO356_04505 0.38 +0.5 1,018,906 - AO356_04505 0.38 -1.2 1,018,909 - AO356_04505 0.39 -0.5 1,018,930 + AO356_04505 0.40 +1.5 1,018,930 + AO356_04505 0.40 +2.0 1,018,931 - AO356_04505 0.41 -0.6 1,018,931 - AO356_04505 0.41 -0.3 1,018,959 + AO356_04505 0.43 -1.1 1,018,959 + AO356_04505 0.43 +0.2 1,018,959 + AO356_04505 0.43 +1.0 1,018,960 - AO356_04505 0.43 +0.2 1,018,960 - AO356_04505 0.43 -0.6 1,018,960 - AO356_04505 0.43 +0.6 1,019,032 - AO356_04505 0.50 -0.4 1,019,032 - AO356_04505 0.50 +0.8 1,019,063 + AO356_04505 0.52 -0.3 1,019,066 - AO356_04505 0.53 +0.9 1,019,066 - AO356_04505 0.53 +0.1 1,019,066 - AO356_04505 0.53 +0.2 1,019,066 - AO356_04505 0.53 +0.3 1,019,087 + AO356_04505 0.55 +0.2 1,019,087 + AO356_04505 0.55 +0.6 1,019,088 - AO356_04505 0.55 +0.3 1,019,088 - AO356_04505 0.55 -0.3 1,019,088 - AO356_04505 0.55 +0.2 1,019,088 - AO356_04505 0.55 -0.0 1,019,104 + AO356_04505 0.56 -0.2 1,019,108 + AO356_04505 0.56 -0.5 1,019,108 + AO356_04505 0.56 -0.5 1,019,109 - AO356_04505 0.57 -0.6 1,019,110 + AO356_04505 0.57 +0.0 1,019,164 + AO356_04505 0.62 -0.9 1,019,164 + AO356_04505 0.62 -0.1 1,019,165 - AO356_04505 0.62 +0.7 1,019,198 + AO356_04505 0.65 +0.2 1,019,198 + AO356_04505 0.65 -0.6 1,019,199 - AO356_04505 0.65 +0.9 1,019,226 + AO356_04505 0.67 -0.6 1,019,227 - AO356_04505 0.67 -0.1 1,019,252 - AO356_04505 0.69 -0.7 1,019,303 + AO356_04505 0.74 +0.3 1,019,303 + AO356_04505 0.74 -0.1 1,019,303 + AO356_04505 0.74 -0.3 1,019,304 - AO356_04505 0.74 -0.1 1,019,304 - AO356_04505 0.74 -0.7 1,019,399 + AO356_04505 0.83 +1.3 1,019,400 - AO356_04505 0.83 -1.6 1,019,401 + AO356_04505 0.83 -0.3 1,019,401 + AO356_04505 0.83 -0.7 1,019,401 + AO356_04505 0.83 +0.1 1,019,401 + AO356_04505 0.83 -1.1 1,019,402 - AO356_04505 0.83 -0.9 1,019,402 - AO356_04505 0.83 +0.6 1,019,402 - AO356_04505 0.83 +0.6 1,019,402 - AO356_04505 0.83 -0.4 1,019,463 - AO356_04505 0.88 -0.6 1,019,508 + -2.6 1,019,508 + -0.9 1,019,508 + +0.1 1,019,509 - +1.6 1,019,511 - -0.7 1,019,576 - -0.0 1,019,718 + -0.8 1,019,875 + -0.3 1,019,876 - -0.1 1,019,896 - -0.4 1,020,277 + AO356_04515 0.54 -0.4 1,020,326 - AO356_04515 0.61 -1.1
Or see this region's nucleotide sequence