Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3325
Experiment: Vanillyl Alcohol 0.005 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vanillyl Alcohol 0.005 M |
---|---|---|---|---|---|
remove | |||||
3,845,014 | + | -0.4 | |||
3,845,014 | + | +1.0 | |||
3,845,042 | + | +0.0 | |||
3,845,238 | + | +1.0 | |||
3,845,386 | + | +0.1 | |||
3,845,839 | + | Pf6N2E2_3325 | 0.37 | +0.1 | |
3,845,856 | + | Pf6N2E2_3325 | 0.39 | -2.1 | |
3,845,904 | + | Pf6N2E2_3325 | 0.43 | -1.2 | |
3,846,227 | + | Pf6N2E2_3325 | 0.75 | -1.0 | |
3,846,514 | + | +1.4 | |||
3,846,702 | + | -0.6 | |||
3,846,743 | - | -0.1 | |||
3,846,810 | + | +0.2 | |||
3,846,811 | - | -0.3 | |||
3,846,846 | - | -0.3 | |||
3,846,846 | - | +1.0 | |||
3,846,868 | + | +1.7 | |||
3,846,916 | + | -0.4 | |||
3,846,916 | + | -0.1 | |||
3,846,917 | - | +1.0 | |||
3,847,065 | + | -1.1 | |||
3,847,066 | - | -0.1 | |||
3,847,066 | - | -0.4 | |||
3,847,079 | - | +1.0 | |||
3,847,131 | + | +0.7 | |||
3,847,230 | + | +1.6 | |||
3,847,230 | + | +0.5 | |||
3,847,230 | + | -1.0 | |||
3,847,231 | - | -1.3 | |||
3,847,231 | - | +1.0 | |||
3,847,231 | - | +0.8 | |||
3,847,231 | - | -0.6 | |||
3,847,231 | - | +0.5 | |||
3,847,231 | - | -0.1 | |||
3,847,231 | - | +0.9 | |||
3,847,231 | - | -1.1 | |||
3,847,231 | - | +0.0 | |||
3,847,370 | + | Pf6N2E2_3326 | 0.54 | +0.5 | |
3,847,370 | + | Pf6N2E2_3326 | 0.54 | +0.3 | |
3,847,475 | + | +0.6 | |||
3,847,475 | + | +0.8 | |||
3,847,475 | + | +1.4 | |||
3,847,476 | - | +0.3 |
Or see this region's nucleotide sequence