Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_21650 and IAI47_21655 are separated by 104 nucleotides IAI47_21655 and IAI47_21660 are separated by 248 nucleotides
IAI47_21650: IAI47_21650 - Gfo/Idh/MocA family oxidoreductase, at 73,871 to 74,884
_21650
IAI47_21655: IAI47_21655 - LacI family DNA-binding transcriptional regulator, at 74,989 to 75,114
_21655
IAI47_21660: IAI47_21660 - PACE efflux transporter, at 75,363 to 75,800
_21660
Position (kb) 74
75
76 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.028 kb on + strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.029 kb on - strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.031 kb on + strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.032 kb on - strand, within IAI47_21650 at 74.097 kb on + strand, within IAI47_21650 at 74.098 kb on - strand, within IAI47_21650 at 74.098 kb on - strand, within IAI47_21650 at 74.098 kb on - strand, within IAI47_21650 at 74.164 kb on + strand, within IAI47_21650 at 74.164 kb on + strand, within IAI47_21650 at 74.164 kb on + strand, within IAI47_21650 at 74.165 kb on - strand, within IAI47_21650 at 74.165 kb on - strand, within IAI47_21650 at 74.165 kb on - strand, within IAI47_21650 at 74.165 kb on - strand, within IAI47_21650 at 74.175 kb on + strand, within IAI47_21650 at 74.176 kb on - strand, within IAI47_21650 at 74.237 kb on + strand, within IAI47_21650 at 74.237 kb on + strand, within IAI47_21650 at 74.238 kb on - strand, within IAI47_21650 at 74.238 kb on - strand, within IAI47_21650 at 74.238 kb on - strand, within IAI47_21650 at 74.238 kb on - strand, within IAI47_21650 at 74.252 kb on - strand, within IAI47_21650 at 74.302 kb on + strand, within IAI47_21650 at 74.302 kb on + strand, within IAI47_21650 at 74.303 kb on - strand, within IAI47_21650 at 74.441 kb on + strand, within IAI47_21650 at 74.441 kb on + strand, within IAI47_21650 at 74.441 kb on + strand, within IAI47_21650 at 74.442 kb on - strand, within IAI47_21650 at 74.442 kb on - strand, within IAI47_21650 at 74.442 kb on - strand, within IAI47_21650 at 74.485 kb on + strand, within IAI47_21650 at 74.486 kb on - strand, within IAI47_21650 at 74.486 kb on - strand, within IAI47_21650 at 74.518 kb on + strand, within IAI47_21650 at 74.537 kb on + strand, within IAI47_21650 at 74.537 kb on + strand, within IAI47_21650 at 74.537 kb on + strand, within IAI47_21650 at 74.537 kb on + strand, within IAI47_21650 at 74.537 kb on + strand, within IAI47_21650 at 74.537 kb on + strand, within IAI47_21650 at 74.537 kb on + strand, within IAI47_21650 at 74.538 kb on - strand, within IAI47_21650 at 74.538 kb on - strand, within IAI47_21650 at 74.538 kb on - strand, within IAI47_21650 at 74.538 kb on - strand, within IAI47_21650 at 74.538 kb on - strand, within IAI47_21650 at 74.538 kb on - strand, within IAI47_21650 at 74.544 kb on + strand, within IAI47_21650 at 74.544 kb on + strand, within IAI47_21650 at 74.544 kb on + strand, within IAI47_21650 at 74.544 kb on + strand, within IAI47_21650 at 74.544 kb on + strand, within IAI47_21650 at 74.544 kb on + strand, within IAI47_21650 at 74.545 kb on - strand, within IAI47_21650 at 74.545 kb on - strand, within IAI47_21650 at 74.545 kb on - strand, within IAI47_21650 at 74.545 kb on - strand, within IAI47_21650 at 74.557 kb on + strand, within IAI47_21650 at 74.558 kb on - strand, within IAI47_21650 at 74.610 kb on + strand, within IAI47_21650 at 74.610 kb on + strand, within IAI47_21650 at 74.610 kb on + strand, within IAI47_21650 at 74.611 kb on - strand, within IAI47_21650 at 74.611 kb on - strand, within IAI47_21650 at 74.621 kb on - strand, within IAI47_21650 at 74.679 kb on - strand, within IAI47_21650 at 74.686 kb on + strand, within IAI47_21650 at 74.686 kb on + strand, within IAI47_21650 at 74.686 kb on + strand, within IAI47_21650 at 74.687 kb on - strand, within IAI47_21650 at 74.689 kb on - strand, within IAI47_21650 at 74.842 kb on + strand at 74.900 kb on - strand at 74.900 kb on - strand at 74.941 kb on + strand at 74.942 kb on - strand at 74.971 kb on + strand at 74.971 kb on + strand at 74.972 kb on - strand at 75.084 kb on + strand, within IAI47_21655 at 75.119 kb on + strand at 75.120 kb on - strand at 75.124 kb on + strand at 75.126 kb on + strand at 75.126 kb on + strand at 75.132 kb on + strand at 75.155 kb on + strand at 75.158 kb on + strand at 75.163 kb on + strand at 75.163 kb on + strand at 75.164 kb on - strand at 75.182 kb on + strand at 75.183 kb on - strand at 75.183 kb on - strand at 75.183 kb on - strand at 75.183 kb on - strand at 75.197 kb on + strand at 75.198 kb on - strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.281 kb on - strand at 75.281 kb on - strand at 75.281 kb on - strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.292 kb on - strand at 75.305 kb on + strand at 75.305 kb on + strand at 75.305 kb on + strand at 75.306 kb on - strand at 75.306 kb on - strand at 75.306 kb on - strand at 75.332 kb on - strand at 75.332 kb on - strand at 75.332 kb on - strand at 75.332 kb on - strand at 75.344 kb on + strand at 75.344 kb on + strand at 75.344 kb on + strand at 75.345 kb on - strand at 75.345 kb on - strand at 75.372 kb on + strand at 75.372 kb on + strand at 75.372 kb on + strand at 75.372 kb on + strand at 75.372 kb on + strand at 75.373 kb on - strand at 75.373 kb on - strand at 75.373 kb on - strand at 75.373 kb on - strand at 75.373 kb on - strand at 75.376 kb on + strand at 75.376 kb on + strand at 75.376 kb on + strand at 75.376 kb on + strand at 75.448 kb on + strand, within IAI47_21660 at 75.449 kb on - strand, within IAI47_21660 at 75.449 kb on - strand, within IAI47_21660 at 75.449 kb on - strand, within IAI47_21660 at 75.455 kb on + strand, within IAI47_21660 at 75.540 kb on + strand, within IAI47_21660 at 75.540 kb on + strand, within IAI47_21660 at 75.540 kb on + strand, within IAI47_21660 at 75.541 kb on - strand, within IAI47_21660 at 75.541 kb on - strand, within IAI47_21660 at 75.541 kb on - strand, within IAI47_21660 at 75.541 kb on - strand, within IAI47_21660 at 75.643 kb on + strand, within IAI47_21660 at 75.643 kb on + strand, within IAI47_21660 at 75.643 kb on + strand, within IAI47_21660 at 75.644 kb on - strand, within IAI47_21660 at 75.680 kb on + strand, within IAI47_21660 at 75.681 kb on - strand, within IAI47_21660 at 75.681 kb on - strand, within IAI47_21660 at 75.683 kb on + strand, within IAI47_21660 at 75.683 kb on + strand, within IAI47_21660 at 75.684 kb on - strand, within IAI47_21660 at 75.684 kb on - strand, within IAI47_21660 at 75.744 kb on + strand, within IAI47_21660 at 75.745 kb on - strand, within IAI47_21660 at 75.745 kb on - strand, within IAI47_21660 at 75.745 kb on - strand, within IAI47_21660 at 75.745 kb on - strand, within IAI47_21660 at 75.753 kb on - strand, within IAI47_21660 at 75.773 kb on + strand at 75.803 kb on + strand at 75.895 kb on + strand at 76.114 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 remove 74,028 + IAI47_21650 0.15 +0.4 74,028 + IAI47_21650 0.15 -0.2 74,028 + IAI47_21650 0.15 -0.1 74,028 + IAI47_21650 0.15 -0.3 74,028 + IAI47_21650 0.15 +1.0 74,028 + IAI47_21650 0.15 +1.3 74,028 + IAI47_21650 0.15 +0.8 74,028 + IAI47_21650 0.15 +0.6 74,028 + IAI47_21650 0.15 -0.9 74,028 + IAI47_21650 0.15 -1.0 74,028 + IAI47_21650 0.15 +0.4 74,028 + IAI47_21650 0.15 +0.5 74,028 + IAI47_21650 0.15 +0.8 74,029 - IAI47_21650 0.16 +0.0 74,029 - IAI47_21650 0.16 +0.6 74,029 - IAI47_21650 0.16 +0.6 74,029 - IAI47_21650 0.16 -0.2 74,029 - IAI47_21650 0.16 +0.5 74,029 - IAI47_21650 0.16 +2.5 74,029 - IAI47_21650 0.16 -1.9 74,029 - IAI47_21650 0.16 +1.9 74,029 - IAI47_21650 0.16 +2.1 74,029 - IAI47_21650 0.16 +0.3 74,031 + IAI47_21650 0.16 +0.9 74,031 + IAI47_21650 0.16 +0.9 74,031 + IAI47_21650 0.16 +2.0 74,031 + IAI47_21650 0.16 -1.0 74,031 + IAI47_21650 0.16 -2.3 74,031 + IAI47_21650 0.16 +1.2 74,031 + IAI47_21650 0.16 -1.0 74,031 + IAI47_21650 0.16 +1.6 74,031 + IAI47_21650 0.16 -0.2 74,031 + IAI47_21650 0.16 +0.5 74,032 - IAI47_21650 0.16 -0.0 74,032 - IAI47_21650 0.16 +1.6 74,032 - IAI47_21650 0.16 +1.1 74,032 - IAI47_21650 0.16 +0.1 74,032 - IAI47_21650 0.16 -0.3 74,032 - IAI47_21650 0.16 +0.3 74,032 - IAI47_21650 0.16 +1.6 74,032 - IAI47_21650 0.16 -1.5 74,032 - IAI47_21650 0.16 +1.0 74,032 - IAI47_21650 0.16 +0.0 74,032 - IAI47_21650 0.16 +0.0 74,097 + IAI47_21650 0.22 +0.9 74,098 - IAI47_21650 0.22 +0.5 74,098 - IAI47_21650 0.22 -0.4 74,098 - IAI47_21650 0.22 +1.5 74,164 + IAI47_21650 0.29 -0.3 74,164 + IAI47_21650 0.29 +0.2 74,164 + IAI47_21650 0.29 +1.3 74,165 - IAI47_21650 0.29 +0.4 74,165 - IAI47_21650 0.29 -2.2 74,165 - IAI47_21650 0.29 +0.4 74,165 - IAI47_21650 0.29 +1.8 74,175 + IAI47_21650 0.30 -1.4 74,176 - IAI47_21650 0.30 +0.7 74,237 + IAI47_21650 0.36 -2.2 74,237 + IAI47_21650 0.36 -1.0 74,238 - IAI47_21650 0.36 +0.7 74,238 - IAI47_21650 0.36 +0.0 74,238 - IAI47_21650 0.36 +1.1 74,238 - IAI47_21650 0.36 +0.6 74,252 - IAI47_21650 0.38 +1.1 74,302 + IAI47_21650 0.43 +0.7 74,302 + IAI47_21650 0.43 -1.0 74,303 - IAI47_21650 0.43 +0.4 74,441 + IAI47_21650 0.56 +0.8 74,441 + IAI47_21650 0.56 -1.1 74,441 + IAI47_21650 0.56 +2.3 74,442 - IAI47_21650 0.56 -1.1 74,442 - IAI47_21650 0.56 -0.4 74,442 - IAI47_21650 0.56 +0.8 74,485 + IAI47_21650 0.61 -1.8 74,486 - IAI47_21650 0.61 +1.2 74,486 - IAI47_21650 0.61 +0.4 74,518 + IAI47_21650 0.64 +0.6 74,537 + IAI47_21650 0.66 -0.3 74,537 + IAI47_21650 0.66 +0.5 74,537 + IAI47_21650 0.66 +1.6 74,537 + IAI47_21650 0.66 +0.4 74,537 + IAI47_21650 0.66 -0.9 74,537 + IAI47_21650 0.66 -1.2 74,537 + IAI47_21650 0.66 +0.1 74,538 - IAI47_21650 0.66 -0.7 74,538 - IAI47_21650 0.66 +2.1 74,538 - IAI47_21650 0.66 +0.7 74,538 - IAI47_21650 0.66 +0.2 74,538 - IAI47_21650 0.66 +0.5 74,538 - IAI47_21650 0.66 +5.8 74,544 + IAI47_21650 0.66 -0.3 74,544 + IAI47_21650 0.66 +0.5 74,544 + IAI47_21650 0.66 +1.9 74,544 + IAI47_21650 0.66 +0.4 74,544 + IAI47_21650 0.66 -1.9 74,544 + IAI47_21650 0.66 -0.7 74,545 - IAI47_21650 0.66 +1.3 74,545 - IAI47_21650 0.66 +0.0 74,545 - IAI47_21650 0.66 +0.3 74,545 - IAI47_21650 0.66 +0.6 74,557 + IAI47_21650 0.68 -0.3 74,558 - IAI47_21650 0.68 +1.0 74,610 + IAI47_21650 0.73 +1.0 74,610 + IAI47_21650 0.73 +1.1 74,610 + IAI47_21650 0.73 +0.1 74,611 - IAI47_21650 0.73 +2.1 74,611 - IAI47_21650 0.73 +2.2 74,621 - IAI47_21650 0.74 -0.7 74,679 - IAI47_21650 0.80 +0.6 74,686 + IAI47_21650 0.80 +0.4 74,686 + IAI47_21650 0.80 -0.3 74,686 + IAI47_21650 0.80 +0.0 74,687 - IAI47_21650 0.80 -1.4 74,689 - IAI47_21650 0.81 -1.0 74,842 + +0.0 74,900 - +1.6 74,900 - +2.1 74,941 + -0.1 74,942 - +0.0 74,971 + +1.4 74,971 + -1.1 74,972 - +0.9 75,084 + IAI47_21655 0.75 -0.8 75,119 + +0.0 75,120 - +0.1 75,124 + -0.7 75,126 + -1.2 75,126 + +0.6 75,132 + +1.6 75,155 + -0.8 75,158 + -0.3 75,163 + -0.6 75,163 + -0.7 75,164 - +1.4 75,182 + +0.6 75,183 - -0.3 75,183 - -1.0 75,183 - +1.6 75,183 - -0.1 75,197 + -1.1 75,198 - -2.0 75,237 + +0.7 75,237 + -0.7 75,237 + +0.6 75,237 + +0.6 75,237 + -0.2 75,237 + +0.1 75,237 + +0.9 75,237 + +0.3 75,237 + +0.1 75,238 - +1.8 75,238 - +1.6 75,238 - -1.6 75,238 - -0.4 75,238 - -1.5 75,238 - +0.0 75,238 - +0.9 75,238 - +2.6 75,238 - -0.2 75,238 - +0.7 75,238 - +0.9 75,238 - -0.1 75,238 - +1.2 75,238 - +0.8 75,238 - +0.6 75,238 - +0.8 75,281 - -0.3 75,281 - -1.5 75,281 - -0.1 75,291 + +0.7 75,291 + +2.0 75,291 + +1.1 75,291 + +0.1 75,291 + -0.2 75,291 + +0.3 75,292 - +3.2 75,305 + -3.2 75,305 + -0.7 75,305 + -0.7 75,306 - +0.1 75,306 - +0.6 75,306 - +0.3 75,332 - +1.6 75,332 - +0.0 75,332 - -1.1 75,332 - +2.2 75,344 + +0.7 75,344 + +1.6 75,344 + +3.4 75,345 - +0.1 75,345 - +0.4 75,372 + +0.0 75,372 + -0.3 75,372 + -0.8 75,372 + +0.6 75,372 + +0.0 75,373 - -0.3 75,373 - +1.4 75,373 - +0.7 75,373 - +0.6 75,373 - +0.6 75,376 + -0.8 75,376 + +0.8 75,376 + +1.6 75,376 + +0.6 75,448 + IAI47_21660 0.19 -0.7 75,449 - IAI47_21660 0.20 +3.2 75,449 - IAI47_21660 0.20 -1.0 75,449 - IAI47_21660 0.20 +0.2 75,455 + IAI47_21660 0.21 -1.7 75,540 + IAI47_21660 0.40 +2.7 75,540 + IAI47_21660 0.40 -0.5 75,540 + IAI47_21660 0.40 +0.3 75,541 - IAI47_21660 0.41 +0.3 75,541 - IAI47_21660 0.41 +0.2 75,541 - IAI47_21660 0.41 -1.0 75,541 - IAI47_21660 0.41 -0.5 75,643 + IAI47_21660 0.64 -0.4 75,643 + IAI47_21660 0.64 -0.1 75,643 + IAI47_21660 0.64 +0.9 75,644 - IAI47_21660 0.64 -0.5 75,680 + IAI47_21660 0.72 +0.6 75,681 - IAI47_21660 0.73 -1.8 75,681 - IAI47_21660 0.73 -0.7 75,683 + IAI47_21660 0.73 +0.1 75,683 + IAI47_21660 0.73 -0.2 75,684 - IAI47_21660 0.73 +0.5 75,684 - IAI47_21660 0.73 -0.4 75,744 + IAI47_21660 0.87 -1.0 75,745 - IAI47_21660 0.87 -0.2 75,745 - IAI47_21660 0.87 -1.2 75,745 - IAI47_21660 0.87 -1.8 75,745 - IAI47_21660 0.87 -0.2 75,753 - IAI47_21660 0.89 +0.6 75,773 + +0.8 75,803 + -1.1 75,895 + +0.8 76,114 + -0.4
Or see this region's nucleotide sequence