Strain Fitness in Pantoea sp. MT58 around IAI47_08860

Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,870,744	-				-0.2
1,870,767	+				-1.0
1,870,768	-				+1.1
1,870,768	-				+0.1
1,870,768	-				+0.1
1,870,768	-				+0.9
1,870,768	-				-0.9
1,870,777	-				+1.1
1,870,789	-				+0.5
1,870,789	-				+1.5
1,870,789	-				+1.7
1,870,789	-				+0.5
1,870,824	-				+1.1
1,870,828	-				+0.5
1,870,828	-				-0.2
1,870,828	-				+0.6
1,870,828	-				+2.5
1,870,956	+		IAI47_08855	0.19	-0.5
1,870,957	-		IAI47_08855	0.19	+2.1
1,870,957	-		IAI47_08855	0.19	+2.1
1,871,025	+		IAI47_08855	0.28	-0.2
1,871,026	-		IAI47_08855	0.29	+1.1
1,871,026	-		IAI47_08855	0.29	+0.7
1,871,026	-		IAI47_08855	0.29	+0.1
1,871,026	-		IAI47_08855	0.29	+0.5
1,871,079	+		IAI47_08855	0.36	-0.7
1,871,079	+		IAI47_08855	0.36	+2.1
1,871,103	-		IAI47_08855	0.39	+0.3
1,871,103	-		IAI47_08855	0.39	-0.5
1,871,267	-		IAI47_08855	0.62	+0.1
1,871,303	-		IAI47_08855	0.67	-0.2
1,871,313	+		IAI47_08855	0.69	-0.9
1,871,314	-		IAI47_08855	0.69	-2.7
1,871,314	-		IAI47_08855	0.69	+2.7
1,871,314	-		IAI47_08855	0.69	+1.1
1,871,318	-		IAI47_08855	0.69	+0.5
1,871,386	-		IAI47_08855	0.79	-1.1
1,871,386	-		IAI47_08855	0.79	-1.3
1,871,386	-		IAI47_08855	0.79	-1.3
1,871,390	-		IAI47_08855	0.80	+0.9
1,871,449	-		IAI47_08855	0.88	+1.8
1,871,449	-		IAI47_08855	0.88	+2.7
1,871,491	+				-1.5
1,871,492	-				+0.1
1,871,505	+				+1.1
1,871,505	+				-1.0
1,871,506	-				-0.8
1,871,506	-				-0.5
1,871,506	-				-0.0
1,871,562	+				-0.2
1,871,568	+				-0.5
1,871,613	-				-0.5
1,871,635	+				+0.5
1,871,635	+				-1.5
1,871,636	-				+0.7
1,871,637	+				+2.1
1,871,637	+				+1.1
1,871,638	-				+0.1
1,871,638	-				-0.2
1,871,638	-				+0.1
1,871,638	-				+1.8
1,871,638	-				+0.9
1,871,641	+				+0.5
1,871,641	+				+0.5
1,871,641	+				-1.0
1,871,641	+				-1.7
1,871,642	-				+0.3
1,871,642	-				+0.5
1,871,642	-				+0.5
1,871,642	-				+2.1
1,871,648	-				-0.7
1,871,648	-				-1.7
1,871,648	-				+0.9
1,871,649	+				-1.0
1,871,706	+				+0.7
1,871,706	+				-0.9
1,871,706	+				+0.9
1,871,707	-				-1.2
1,871,719	+		IAI47_08860	0.10	+2.1
1,871,733	+		IAI47_08860	0.15	+1.3
1,871,733	+		IAI47_08860	0.15	+1.3
1,871,733	+		IAI47_08860	0.15	-0.4
1,871,733	+		IAI47_08860	0.15	+1.1
1,871,734	-		IAI47_08860	0.16	+1.1
1,871,734	-		IAI47_08860	0.16	+1.6
1,871,739	+		IAI47_08860	0.17	+2.1
1,871,739	+		IAI47_08860	0.17	+0.2
1,871,739	+		IAI47_08860	0.17	-0.5
1,871,739	+		IAI47_08860	0.17	+0.0
1,871,740	-		IAI47_08860	0.18	+0.7
1,871,740	-		IAI47_08860	0.18	-0.5
1,871,740	-		IAI47_08860	0.18	+0.2
1,871,740	-		IAI47_08860	0.18	-0.7
1,871,740	-		IAI47_08860	0.18	-0.2
1,871,740	-		IAI47_08860	0.18	-0.2
1,871,821	+		IAI47_08860	0.47	+0.5
1,871,822	-		IAI47_08860	0.47	+1.5
1,871,858	+		IAI47_08860	0.61	-0.1
1,871,859	-		IAI47_08860	0.61	+0.5
1,871,859	-		IAI47_08860	0.61	-0.2
1,871,864	+		IAI47_08860	0.63	+2.1
1,871,865	-		IAI47_08860	0.63	+1.1
1,871,870	+		IAI47_08860	0.65	+1.2
1,871,870	+		IAI47_08860	0.65	+1.4
1,871,870	+		IAI47_08860	0.65	+0.2
1,871,871	-		IAI47_08860	0.65	-2.3
1,871,899	-		IAI47_08860	0.75	-1.0
1,871,944	+				+3.5
1,871,945	-				-0.2
1,871,964	+				+0.1
1,871,985	+				+0.6
1,871,988	-				+1.1
1,872,016	+				-0.6
1,872,017	-				-2.0
1,872,019	+				+1.1
1,872,019	+				+0.1
1,872,019	+				-1.6
1,872,020	-				+0.3
1,872,020	-				+1.5
1,872,055	+				-0.9
1,872,055	+				-0.7
1,872,107	+				+2.1
1,872,113	+				+0.2
1,872,114	-				-1.3
1,872,172	+				+1.0
1,872,183	+				+2.5
1,872,183	+				-0.5
1,872,184	-				-1.8
1,872,186	+				+1.4
1,872,186	+				+0.5
1,872,186	+				+1.0
1,872,186	+				+0.1
1,872,186	+				+1.3
1,872,187	-				-0.2
1,872,261	+				+1.5
1,872,285	+				-0.7
1,872,285	+				+1.4
1,872,285	+				+0.0
1,872,285	+				-0.0
1,872,285	+				+1.1
1,872,286	-				-1.2
1,872,286	-				+0.1
1,872,286	-				+0.3
1,872,286	-				-1.3
1,872,286	-				-1.7
1,872,296	+				+0.0
1,872,297	-				-0.0
1,872,297	-				+0.0
1,872,316	+				+1.0
1,872,317	-				-1.5
1,872,332	+				-0.3
1,872,353	+		IAI47_08865	0.11	+0.8
1,872,353	+		IAI47_08865	0.11	+0.3
1,872,353	+		IAI47_08865	0.11	+0.4
1,872,354	-		IAI47_08865	0.11	-1.0
1,872,357	+		IAI47_08865	0.11	+0.5
1,872,357	+		IAI47_08865	0.11	+2.1
1,872,371	+		IAI47_08865	0.13	+4.1
1,872,414	-		IAI47_08865	0.20	+0.9
1,872,442	+		IAI47_08865	0.24	+1.5
1,872,459	-		IAI47_08865	0.27	+0.1
1,872,459	-		IAI47_08865	0.27	+1.0
1,872,459	-		IAI47_08865	0.27	+1.1
1,872,551	+		IAI47_08865	0.41	-0.5
1,872,773	+		IAI47_08865	0.74	+2.8
1,872,773	+		IAI47_08865	0.74	+0.4
1,872,773	+		IAI47_08865	0.74	+1.5
1,872,773	+		IAI47_08865	0.74	+0.7
1,872,774	-		IAI47_08865	0.75	-0.7
1,872,774	-		IAI47_08865	0.75	+0.5
1,872,782	+		IAI47_08865	0.76	-0.9
1,872,782	+		IAI47_08865	0.76	+1.9
1,872,783	-		IAI47_08865	0.76	+0.7
1,872,816	+		IAI47_08865	0.81	-0.2
1,872,816	+		IAI47_08865	0.81	-0.2
1,872,816	+		IAI47_08865	0.81	+2.1
1,872,816	+		IAI47_08865	0.81	+4.2
1,872,821	+		IAI47_08865	0.82	+0.1
1,872,822	-		IAI47_08865	0.82	-1.2
1,872,822	-		IAI47_08865	0.82	+0.1
1,872,940	-				+0.4
1,872,962	+				+1.0
1,872,963	-				-0.2
1,872,963	-				-1.9
1,872,963	-				+0.1