Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22805 and HSERO_RS22810 are separated by 11 nucleotides HSERO_RS22810 and HSERO_RS22815 are separated by 149 nucleotides HSERO_RS22815 and HSERO_RS22820 are separated by 23 nucleotides
HSERO_RS22805: HSERO_RS22805 - GMC family oxidoreductase, at 5,234,638 to 5,236,410
_RS22805
HSERO_RS22810: HSERO_RS22810 - alcohol dehydrogenase, at 5,236,422 to 5,237,693
_RS22810
HSERO_RS22815: HSERO_RS22815 - hypothetical protein, at 5,237,843 to 5,238,274
_RS22815
HSERO_RS22820: HSERO_RS22820 - ArsR family transcriptional regulator, at 5,238,298 to 5,238,630
_RS22820
Position (kb) 5236
5237
5238 Strain fitness (log2 ratio) -1
0
1
2 at 5235.466 kb on + strand, within HSERO_RS22805 at 5235.500 kb on - strand, within HSERO_RS22805 at 5235.749 kb on - strand, within HSERO_RS22805 at 5235.928 kb on - strand, within HSERO_RS22805 at 5235.928 kb on - strand at 5235.994 kb on - strand, within HSERO_RS22805 at 5236.036 kb on + strand, within HSERO_RS22805 at 5236.085 kb on + strand, within HSERO_RS22805 at 5236.110 kb on + strand, within HSERO_RS22805 at 5236.118 kb on - strand at 5236.129 kb on + strand, within HSERO_RS22805 at 5236.305 kb on + strand at 5236.344 kb on + strand at 5236.516 kb on - strand at 5236.656 kb on + strand, within HSERO_RS22810 at 5236.743 kb on + strand, within HSERO_RS22810 at 5237.010 kb on - strand, within HSERO_RS22810 at 5237.017 kb on + strand, within HSERO_RS22810 at 5237.127 kb on + strand, within HSERO_RS22810 at 5237.207 kb on + strand, within HSERO_RS22810 at 5237.207 kb on + strand, within HSERO_RS22810 at 5237.344 kb on - strand, within HSERO_RS22810 at 5237.380 kb on - strand, within HSERO_RS22810 at 5237.623 kb on - strand at 5237.673 kb on + strand at 5237.817 kb on + strand at 5237.846 kb on + strand at 5237.876 kb on + strand at 5237.881 kb on + strand at 5238.100 kb on + strand, within HSERO_RS22815 at 5238.109 kb on + strand, within HSERO_RS22815 at 5238.277 kb on - strand at 5238.281 kb on + strand at 5238.289 kb on - strand at 5238.398 kb on + strand, within HSERO_RS22820 at 5238.398 kb on + strand, within HSERO_RS22820 at 5238.398 kb on + strand, within HSERO_RS22820 at 5238.398 kb on + strand, within HSERO_RS22820 at 5238.598 kb on + strand at 5238.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 5,235,466 + HSERO_RS22805 0.47 -0.1 5,235,500 - HSERO_RS22805 0.49 -0.5 5,235,749 - HSERO_RS22805 0.63 -0.5 5,235,928 - HSERO_RS22805 0.73 -0.5 5,235,928 - +1.0 5,235,994 - HSERO_RS22805 0.76 +0.0 5,236,036 + HSERO_RS22805 0.79 -0.2 5,236,085 + HSERO_RS22805 0.82 -0.4 5,236,110 + HSERO_RS22805 0.83 -0.1 5,236,118 - -1.4 5,236,129 + HSERO_RS22805 0.84 +0.3 5,236,305 + -0.6 5,236,344 + +0.0 5,236,516 - +0.6 5,236,656 + HSERO_RS22810 0.18 -0.1 5,236,743 + HSERO_RS22810 0.25 +0.0 5,237,010 - HSERO_RS22810 0.46 +0.5 5,237,017 + HSERO_RS22810 0.47 +0.4 5,237,127 + HSERO_RS22810 0.55 +0.2 5,237,207 + HSERO_RS22810 0.62 +1.4 5,237,207 + HSERO_RS22810 0.62 -0.3 5,237,344 - HSERO_RS22810 0.72 +1.8 5,237,380 - HSERO_RS22810 0.75 +1.0 5,237,623 - +0.0 5,237,673 + -0.2 5,237,817 + +0.3 5,237,846 + +0.5 5,237,876 + -0.2 5,237,881 + -0.6 5,238,100 + HSERO_RS22815 0.59 +0.5 5,238,109 + HSERO_RS22815 0.62 +1.0 5,238,277 - +0.7 5,238,281 + +0.8 5,238,289 - +0.5 5,238,398 + HSERO_RS22820 0.30 -0.3 5,238,398 + HSERO_RS22820 0.30 -0.6 5,238,398 + HSERO_RS22820 0.30 -0.2 5,238,398 + HSERO_RS22820 0.30 -0.2 5,238,598 + -0.7 5,238,598 - -1.1
Or see this region's nucleotide sequence