Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22735 and HSERO_RS22740 are separated by 186 nucleotides HSERO_RS22740 and HSERO_RS22745 are separated by 16 nucleotides HSERO_RS22745 and HSERO_RS22750 are separated by 24 nucleotides
HSERO_RS22735: HSERO_RS22735 - sugar ABC transporter substrate-binding protein, at 5,214,711 to 5,215,973
_RS22735
HSERO_RS22740: HSERO_RS22740 - ABC transporter permease, at 5,216,160 to 5,217,074
_RS22740
HSERO_RS22745: HSERO_RS22745 - sugar ABC transporter permease, at 5,217,091 to 5,217,993
_RS22745
HSERO_RS22750: HSERO_RS22750 - sugar ABC transporter ATP-binding protein, at 5,218,018 to 5,219,151
_RS22750
Position (kb) 5216
5217
5218 Strain fitness (log2 ratio) -1
0
1
2 at 5215.173 kb on + strand, within HSERO_RS22735 at 5215.190 kb on + strand, within HSERO_RS22735 at 5215.198 kb on - strand, within HSERO_RS22735 at 5215.228 kb on - strand, within HSERO_RS22735 at 5215.228 kb on - strand, within HSERO_RS22735 at 5215.323 kb on - strand, within HSERO_RS22735 at 5215.421 kb on + strand, within HSERO_RS22735 at 5215.433 kb on + strand, within HSERO_RS22735 at 5215.487 kb on + strand, within HSERO_RS22735 at 5216.056 kb on + strand at 5216.100 kb on + strand at 5216.110 kb on + strand at 5216.233 kb on + strand at 5216.233 kb on - strand at 5216.304 kb on + strand, within HSERO_RS22740 at 5216.330 kb on + strand, within HSERO_RS22740 at 5216.403 kb on + strand, within HSERO_RS22740 at 5216.454 kb on + strand, within HSERO_RS22740 at 5216.504 kb on + strand, within HSERO_RS22740 at 5216.701 kb on - strand, within HSERO_RS22740 at 5216.859 kb on - strand, within HSERO_RS22740 at 5217.146 kb on + strand at 5217.194 kb on - strand, within HSERO_RS22745 at 5217.231 kb on + strand, within HSERO_RS22745 at 5217.239 kb on - strand, within HSERO_RS22745 at 5217.242 kb on + strand, within HSERO_RS22745 at 5217.260 kb on - strand, within HSERO_RS22745 at 5217.306 kb on - strand, within HSERO_RS22745 at 5217.562 kb on + strand, within HSERO_RS22745 at 5217.594 kb on + strand, within HSERO_RS22745 at 5217.594 kb on + strand, within HSERO_RS22745 at 5217.594 kb on + strand, within HSERO_RS22745 at 5217.594 kb on + strand, within HSERO_RS22745 at 5217.602 kb on - strand, within HSERO_RS22745 at 5217.602 kb on - strand, within HSERO_RS22745 at 5217.602 kb on - strand, within HSERO_RS22745 at 5217.602 kb on - strand, within HSERO_RS22745 at 5217.666 kb on + strand, within HSERO_RS22745 at 5217.759 kb on + strand, within HSERO_RS22745 at 5217.828 kb on + strand, within HSERO_RS22745
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 5,215,173 + HSERO_RS22735 0.37 -1.6 5,215,190 + HSERO_RS22735 0.38 +0.1 5,215,198 - HSERO_RS22735 0.39 +0.3 5,215,228 - HSERO_RS22735 0.41 +1.4 5,215,228 - HSERO_RS22735 0.41 -0.3 5,215,323 - HSERO_RS22735 0.48 +0.2 5,215,421 + HSERO_RS22735 0.56 -0.4 5,215,433 + HSERO_RS22735 0.57 -0.1 5,215,487 + HSERO_RS22735 0.61 +0.5 5,216,056 + +1.3 5,216,100 + +0.4 5,216,110 + +0.9 5,216,233 + -0.2 5,216,233 - +0.2 5,216,304 + HSERO_RS22740 0.16 -0.5 5,216,330 + HSERO_RS22740 0.19 +0.8 5,216,403 + HSERO_RS22740 0.27 +0.8 5,216,454 + HSERO_RS22740 0.32 -0.2 5,216,504 + HSERO_RS22740 0.38 +0.4 5,216,701 - HSERO_RS22740 0.59 +0.9 5,216,859 - HSERO_RS22740 0.76 +0.6 5,217,146 + +0.9 5,217,194 - HSERO_RS22745 0.11 -0.4 5,217,231 + HSERO_RS22745 0.16 +0.5 5,217,239 - HSERO_RS22745 0.16 -0.4 5,217,242 + HSERO_RS22745 0.17 +1.2 5,217,260 - HSERO_RS22745 0.19 +0.1 5,217,306 - HSERO_RS22745 0.24 +0.2 5,217,562 + HSERO_RS22745 0.52 -0.8 5,217,594 + HSERO_RS22745 0.56 -0.6 5,217,594 + HSERO_RS22745 0.56 -0.0 5,217,594 + HSERO_RS22745 0.56 +1.8 5,217,594 + HSERO_RS22745 0.56 +0.3 5,217,602 - HSERO_RS22745 0.57 +1.3 5,217,602 - HSERO_RS22745 0.57 -0.5 5,217,602 - HSERO_RS22745 0.57 +0.5 5,217,602 - HSERO_RS22745 0.57 +1.8 5,217,666 + HSERO_RS22745 0.64 +0.6 5,217,759 + HSERO_RS22745 0.74 +0.4 5,217,828 + HSERO_RS22745 0.82 -1.1
Or see this region's nucleotide sequence