Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18255 and HSERO_RS18260 overlap by 11 nucleotides HSERO_RS18260 and HSERO_RS18265 are separated by 8 nucleotides HSERO_RS18265 and HSERO_RS18270 are separated by 12 nucleotides
HSERO_RS18255: HSERO_RS18255 - branched-chain amino acid ABC transporter substrate-binding protein, at 4,190,011 to 4,190,778
_RS18255
HSERO_RS18260: HSERO_RS18260 - branched-chain amino acid ABC transporter permease, at 4,190,768 to 4,191,721
_RS18260
HSERO_RS18265: HSERO_RS18265 - ABC transporter permease, at 4,191,730 to 4,192,644
_RS18265
HSERO_RS18270: HSERO_RS18270 - ABC transporter substrate-binding protein, at 4,192,657 to 4,193,835
_RS18270
Position (kb) 4191
4192
4193 Strain fitness (log2 ratio) -1
0
1 at 4190.934 kb on + strand, within HSERO_RS18260 at 4190.942 kb on - strand, within HSERO_RS18260 at 4190.972 kb on - strand, within HSERO_RS18260 at 4191.011 kb on + strand, within HSERO_RS18260 at 4191.151 kb on - strand, within HSERO_RS18260 at 4191.208 kb on + strand, within HSERO_RS18260 at 4191.216 kb on - strand, within HSERO_RS18260 at 4191.235 kb on + strand, within HSERO_RS18260 at 4191.636 kb on + strand at 4191.643 kb on + strand at 4191.651 kb on - strand at 4191.680 kb on - strand at 4191.905 kb on - strand, within HSERO_RS18265 at 4192.182 kb on - strand, within HSERO_RS18265 at 4192.309 kb on - strand, within HSERO_RS18265 at 4192.349 kb on - strand, within HSERO_RS18265 at 4192.630 kb on + strand at 4192.631 kb on - strand at 4192.663 kb on - strand at 4192.753 kb on - strand at 4192.807 kb on - strand, within HSERO_RS18270 at 4192.990 kb on + strand, within HSERO_RS18270 at 4193.007 kb on + strand, within HSERO_RS18270 at 4193.012 kb on + strand, within HSERO_RS18270 at 4193.113 kb on - strand, within HSERO_RS18270 at 4193.235 kb on + strand, within HSERO_RS18270 at 4193.293 kb on + strand, within HSERO_RS18270 at 4193.315 kb on + strand, within HSERO_RS18270 at 4193.496 kb on - strand, within HSERO_RS18270 at 4193.547 kb on - strand, within HSERO_RS18270 at 4193.594 kb on - strand, within HSERO_RS18270 at 4193.603 kb on - strand, within HSERO_RS18270
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 4,190,934 + HSERO_RS18260 0.17 -0.7 4,190,942 - HSERO_RS18260 0.18 +1.2 4,190,972 - HSERO_RS18260 0.21 +0.6 4,191,011 + HSERO_RS18260 0.25 -0.9 4,191,151 - HSERO_RS18260 0.40 +0.2 4,191,208 + HSERO_RS18260 0.46 -0.0 4,191,216 - HSERO_RS18260 0.47 +0.2 4,191,235 + HSERO_RS18260 0.49 +1.0 4,191,636 + -1.0 4,191,643 + -0.4 4,191,651 - +0.1 4,191,680 - -0.2 4,191,905 - HSERO_RS18265 0.19 +0.6 4,192,182 - HSERO_RS18265 0.49 +0.2 4,192,309 - HSERO_RS18265 0.63 +0.4 4,192,349 - HSERO_RS18265 0.68 -0.2 4,192,630 + +0.1 4,192,631 - -0.6 4,192,663 - -0.6 4,192,753 - +1.1 4,192,807 - HSERO_RS18270 0.13 -0.3 4,192,990 + HSERO_RS18270 0.28 -0.2 4,193,007 + HSERO_RS18270 0.30 +0.3 4,193,012 + HSERO_RS18270 0.30 +0.6 4,193,113 - HSERO_RS18270 0.39 -0.3 4,193,235 + HSERO_RS18270 0.49 +0.0 4,193,293 + HSERO_RS18270 0.54 +0.4 4,193,315 + HSERO_RS18270 0.56 -0.3 4,193,496 - HSERO_RS18270 0.71 -0.2 4,193,547 - HSERO_RS18270 0.75 -0.5 4,193,594 - HSERO_RS18270 0.79 +0.5 4,193,603 - HSERO_RS18270 0.80 -0.9
Or see this region's nucleotide sequence