Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08550 and HSERO_RS08555 are separated by 137 nucleotides HSERO_RS08555 and HSERO_RS08560 are separated by 77 nucleotides HSERO_RS08560 and HSERO_RS08565 are separated by 30 nucleotides
HSERO_RS08550: HSERO_RS08550 - LysR family transcriptional regulator, at 1,947,409 to 1,948,302
_RS08550
HSERO_RS08555: HSERO_RS08555 - agmatinase, at 1,948,440 to 1,949,393
_RS08555
HSERO_RS08560: HSERO_RS08560 - GNAT family acetyltransferase, at 1,949,471 to 1,949,956
_RS08560
HSERO_RS08565: HSERO_RS08565 - RNA helicase, at 1,949,987 to 1,951,549
_RS08565
Position (kb) 1948
1949
1950 Strain fitness (log2 ratio) -1
0
1 at 1947.649 kb on - strand, within HSERO_RS08550 at 1947.957 kb on + strand, within HSERO_RS08550 at 1947.970 kb on - strand, within HSERO_RS08550 at 1948.114 kb on - strand, within HSERO_RS08550 at 1948.121 kb on - strand, within HSERO_RS08550 at 1948.161 kb on + strand, within HSERO_RS08550 at 1948.314 kb on - strand at 1948.622 kb on - strand, within HSERO_RS08555 at 1949.149 kb on - strand, within HSERO_RS08555 at 1949.302 kb on + strand at 1949.493 kb on + strand at 1949.522 kb on - strand, within HSERO_RS08560 at 1949.590 kb on + strand, within HSERO_RS08560 at 1949.637 kb on + strand, within HSERO_RS08560 at 1949.891 kb on - strand, within HSERO_RS08560 at 1950.022 kb on + strand at 1950.170 kb on + strand, within HSERO_RS08565
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 1,947,649 - HSERO_RS08550 0.27 -0.0 1,947,957 + HSERO_RS08550 0.61 +0.2 1,947,970 - HSERO_RS08550 0.63 -0.0 1,948,114 - HSERO_RS08550 0.79 -0.4 1,948,121 - HSERO_RS08550 0.80 +0.7 1,948,161 + HSERO_RS08550 0.84 +0.9 1,948,314 - -0.1 1,948,622 - HSERO_RS08555 0.19 +0.1 1,949,149 - HSERO_RS08555 0.74 +1.1 1,949,302 + -0.4 1,949,493 + +0.4 1,949,522 - HSERO_RS08560 0.10 +0.3 1,949,590 + HSERO_RS08560 0.24 -0.4 1,949,637 + HSERO_RS08560 0.34 -0.6 1,949,891 - HSERO_RS08560 0.86 +0.2 1,950,022 + +0.3 1,950,170 + HSERO_RS08565 0.12 +0.6
Or see this region's nucleotide sequence