Experiment: Carbon source D-Glucose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03015 and HSERO_RS03020 are separated by 17 nucleotides HSERO_RS03020 and HSERO_RS03025 are separated by 19 nucleotides HSERO_RS03025 and HSERO_RS03030 are separated by 159 nucleotides HSERO_RS03030 and HSERO_RS03035 are separated by 13 nucleotides
HSERO_RS03015: HSERO_RS03015 - hypothetical protein, at 661,659 to 661,985
_RS03015
HSERO_RS03020: HSERO_RS03020 - biopolymer transporter ExbD, at 662,003 to 662,449
_RS03020
HSERO_RS03025: HSERO_RS03025 - biopolymer transport transmembrane protein, at 662,469 to 663,164
_RS03025
HSERO_RS03030: HSERO_RS03030 - dihydrodipicolinate reductase, at 663,324 to 664,130
_RS03030
HSERO_RS03035: HSERO_RS03035 - small protein A, at 664,144 to 664,689
_RS03035
Position (kb) 662
663
664 Strain fitness (log2 ratio) -1
0
1 at 661.535 kb on + strand at 661.655 kb on - strand at 661.788 kb on + strand, within HSERO_RS03015 at 661.907 kb on + strand, within HSERO_RS03015 at 661.978 kb on - strand at 662.220 kb on + strand, within HSERO_RS03020 at 662.254 kb on + strand, within HSERO_RS03020 at 662.313 kb on - strand, within HSERO_RS03020 at 662.539 kb on + strand, within HSERO_RS03025 at 662.552 kb on - strand, within HSERO_RS03025 at 662.616 kb on - strand, within HSERO_RS03025 at 662.672 kb on - strand, within HSERO_RS03025 at 662.682 kb on + strand, within HSERO_RS03025 at 662.929 kb on + strand, within HSERO_RS03025 at 662.946 kb on + strand, within HSERO_RS03025 at 663.040 kb on + strand, within HSERO_RS03025 at 663.153 kb on + strand at 663.158 kb on + strand at 663.161 kb on - strand at 663.279 kb on - strand at 663.318 kb on - strand at 664.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 20 mM remove 661,535 + -0.5 661,655 - -0.1 661,788 + HSERO_RS03015 0.39 -0.1 661,907 + HSERO_RS03015 0.76 -0.2 661,978 - -0.7 662,220 + HSERO_RS03020 0.49 +0.6 662,254 + HSERO_RS03020 0.56 -0.9 662,313 - HSERO_RS03020 0.69 -0.7 662,539 + HSERO_RS03025 0.10 +0.8 662,552 - HSERO_RS03025 0.12 +0.5 662,616 - HSERO_RS03025 0.21 +0.1 662,672 - HSERO_RS03025 0.29 +0.1 662,682 + HSERO_RS03025 0.31 -0.1 662,929 + HSERO_RS03025 0.66 +0.1 662,946 + HSERO_RS03025 0.69 +0.8 663,040 + HSERO_RS03025 0.82 +0.4 663,153 + -0.4 663,158 + +0.6 663,161 - +0.1 663,279 - +0.3 663,318 - -0.1 664,150 - -0.2
Or see this region's nucleotide sequence