Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23365 and BWI76_RS23370 overlap by 14 nucleotides BWI76_RS23370 and BWI76_RS23375 are separated by 135 nucleotides BWI76_RS23375 and BWI76_RS23380 are separated by 493 nucleotides
BWI76_RS23365: BWI76_RS23365 - LysR family transcriptional regulator, at 4,872,737 to 4,873,663
_RS23365
BWI76_RS23370: BWI76_RS23370 - aspartate/glutamate racemase, at 4,873,650 to 4,874,342
_RS23370
BWI76_RS23375: BWI76_RS23375 - cupin, at 4,874,478 to 4,874,804
_RS23375
BWI76_RS23380: BWI76_RS23380 - sugar ABC transporter permease, at 4,875,298 to 4,876,188
_RS23380
Position (kb)
4873
4874
4875 Strain fitness (log2 ratio)
-1
0
1 at 4873.349 kb on - strand, within BWI76_RS23365 at 4873.500 kb on + strand at 4873.500 kb on + strand, within BWI76_RS23365 at 4873.508 kb on - strand, within BWI76_RS23365 at 4873.534 kb on - strand, within BWI76_RS23365 at 4873.604 kb on + strand at 4873.648 kb on + strand at 4873.802 kb on + strand, within BWI76_RS23370 at 4873.810 kb on - strand, within BWI76_RS23370 at 4873.822 kb on - strand, within BWI76_RS23370 at 4873.823 kb on + strand, within BWI76_RS23370 at 4873.920 kb on + strand, within BWI76_RS23370 at 4873.997 kb on - strand, within BWI76_RS23370 at 4874.110 kb on - strand, within BWI76_RS23370 at 4874.134 kb on - strand, within BWI76_RS23370 at 4874.156 kb on - strand, within BWI76_RS23370 at 4874.311 kb on - strand at 4874.519 kb on - strand, within BWI76_RS23375 at 4874.519 kb on - strand, within BWI76_RS23375 at 4874.578 kb on + strand, within BWI76_RS23375 at 4874.627 kb on + strand, within BWI76_RS23375 at 4874.627 kb on + strand, within BWI76_RS23375 at 4874.632 kb on + strand, within BWI76_RS23375 at 4874.632 kb on + strand, within BWI76_RS23375 at 4874.640 kb on - strand, within BWI76_RS23375 at 4874.821 kb on - strand at 4874.821 kb on - strand at 4874.941 kb on + strand at 4874.950 kb on - strand at 4874.961 kb on + strand at 4874.961 kb on + strand at 4874.961 kb on + strand at 4874.969 kb on - strand at 4874.969 kb on - strand at 4874.969 kb on - strand at 4875.256 kb on + strand at 4875.287 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 4,873,349 - BWI76_RS23365 0.66 +0.9 4,873,500 + +1.1 4,873,500 + BWI76_RS23365 0.82 +0.1 4,873,508 - BWI76_RS23365 0.83 -0.2 4,873,534 - BWI76_RS23365 0.86 +1.7 4,873,604 + -0.7 4,873,648 + +0.6 4,873,802 + BWI76_RS23370 0.22 -0.2 4,873,810 - BWI76_RS23370 0.23 -0.5 4,873,822 - BWI76_RS23370 0.25 -0.3 4,873,823 + BWI76_RS23370 0.25 -0.0 4,873,920 + BWI76_RS23370 0.39 +1.7 4,873,997 - BWI76_RS23370 0.50 +0.3 4,874,110 - BWI76_RS23370 0.66 -0.7 4,874,134 - BWI76_RS23370 0.70 +0.0 4,874,156 - BWI76_RS23370 0.73 -0.5 4,874,311 - +0.3 4,874,519 - BWI76_RS23375 0.13 -0.0 4,874,519 - BWI76_RS23375 0.13 +0.4 4,874,578 + BWI76_RS23375 0.31 -0.1 4,874,627 + BWI76_RS23375 0.46 -0.4 4,874,627 + BWI76_RS23375 0.46 -0.1 4,874,632 + BWI76_RS23375 0.47 +0.8 4,874,632 + BWI76_RS23375 0.47 -0.1 4,874,640 - BWI76_RS23375 0.50 +0.4 4,874,821 - +0.6 4,874,821 - -0.3 4,874,941 + +0.4 4,874,950 - +1.2 4,874,961 + -0.1 4,874,961 + -0.5 4,874,961 + +0.4 4,874,969 - -0.7 4,874,969 - +0.3 4,874,969 - -0.0 4,875,256 + -0.2 4,875,287 + -0.2
Or see this region's nucleotide sequence