Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18355
Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 3 mM |
---|---|---|---|---|---|
remove | |||||
3,809,695 | - | -0.3 | |||
3,809,698 | + | +0.2 | |||
3,809,698 | + | +0.4 | |||
3,809,698 | + | +0.0 | |||
3,809,706 | - | +0.6 | |||
3,809,723 | + | +0.8 | |||
3,809,723 | + | +1.3 | |||
3,809,723 | + | +0.0 | |||
3,809,723 | + | +0.2 | |||
3,809,723 | - | -0.0 | |||
3,809,731 | - | -0.3 | |||
3,809,748 | - | -0.5 | |||
3,809,791 | + | -0.7 | |||
3,809,799 | - | -1.1 | |||
3,809,806 | + | +1.0 | |||
3,809,819 | - | -0.1 | |||
3,809,861 | + | -1.3 | |||
3,809,866 | + | -1.5 | |||
3,810,023 | + | BWI76_RS18350 | 0.26 | -1.3 | |
3,810,198 | + | BWI76_RS18350 | 0.49 | -2.6 | |
3,810,276 | + | BWI76_RS18350 | 0.60 | -2.0 | |
3,810,324 | - | BWI76_RS18350 | 0.66 | -1.2 | |
3,810,357 | + | BWI76_RS18350 | 0.70 | +0.4 | |
3,810,365 | - | BWI76_RS18350 | 0.71 | -0.6 | |
3,810,437 | - | BWI76_RS18350 | 0.81 | -0.6 | |
3,810,518 | - | -1.1 | |||
3,810,600 | + | -1.6 | |||
3,810,724 | + | BWI76_RS18355 | 0.22 | +1.1 | |
3,810,737 | - | BWI76_RS18355 | 0.24 | -4.2 | |
3,811,005 | - | BWI76_RS18355 | 0.64 | -1.2 | |
3,811,173 | - | BWI76_RS18355 | 0.89 | -0.9 | |
3,811,226 | + | -0.7 | |||
3,811,234 | - | -1.9 | |||
3,811,286 | + | -1.3 | |||
3,811,486 | + | BWI76_RS18360 | 0.23 | -0.8 | |
3,811,800 | - | BWI76_RS18360 | 0.55 | +0.6 | |
3,811,968 | - | BWI76_RS18360 | 0.72 | -1.2 |
Or see this region's nucleotide sequence