Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13970 and BWI76_RS13975 are separated by 4 nucleotides BWI76_RS13975 and BWI76_RS13980 are separated by 10 nucleotides BWI76_RS13980 and BWI76_RS13985 are separated by 168 nucleotides
BWI76_RS13970: BWI76_RS13970 - ABC transporter, at 2,915,967 to 2,916,743
_RS13970
BWI76_RS13975: BWI76_RS13975 - urea carboxylase, at 2,916,748 to 2,917,476
_RS13975
BWI76_RS13980: BWI76_RS13980 - hypothetical protein, at 2,917,487 to 2,918,122
_RS13980
BWI76_RS13985: BWI76_RS13985 - urea carboxylase, at 2,918,291 to 2,921,896
_RS13985
Position (kb)
2917
2918
2919 Strain fitness (log2 ratio)
-1
0
1 at 2916.576 kb on + strand, within BWI76_RS13970 at 2916.777 kb on - strand at 2916.778 kb on - strand at 2917.061 kb on - strand, within BWI76_RS13975 at 2917.396 kb on + strand, within BWI76_RS13975 at 2917.845 kb on - strand, within BWI76_RS13980 at 2917.850 kb on + strand, within BWI76_RS13980 at 2918.124 kb on - strand at 2918.187 kb on - strand at 2918.342 kb on + strand at 2918.404 kb on - strand at 2918.506 kb on - strand at 2918.564 kb on + strand at 2918.955 kb on + strand, within BWI76_RS13985 at 2919.073 kb on + strand, within BWI76_RS13985
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 2,916,576 + BWI76_RS13970 0.78 -0.1 2,916,777 - -0.1 2,916,778 - -0.2 2,917,061 - BWI76_RS13975 0.43 +0.1 2,917,396 + BWI76_RS13975 0.89 +0.2 2,917,845 - BWI76_RS13980 0.56 -0.7 2,917,850 + BWI76_RS13980 0.57 -0.4 2,918,124 - -0.7 2,918,187 - +0.1 2,918,342 + +0.3 2,918,404 - -0.2 2,918,506 - +0.0 2,918,564 + -1.5 2,918,955 + BWI76_RS13985 0.18 -1.2 2,919,073 + BWI76_RS13985 0.22 -0.4
Or see this region's nucleotide sequence