Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10560
Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 3 mM |
---|---|---|---|---|---|
remove | |||||
2,229,082 | + | BWI76_RS10550 | 0.44 | +0.0 | |
2,229,087 | + | BWI76_RS10550 | 0.44 | +0.4 | |
2,229,203 | + | BWI76_RS10550 | 0.52 | +0.0 | |
2,230,028 | - | BWI76_RS10555 | 0.86 | -0.6 | |
2,230,180 | + | -0.2 | |||
2,230,188 | - | -0.1 | |||
2,230,907 | - | BWI76_RS10560 | 0.53 | -1.1 | |
2,230,999 | + | BWI76_RS10560 | 0.59 | -0.8 | |
2,231,062 | + | BWI76_RS10560 | 0.63 | -0.1 | |
2,231,079 | + | BWI76_RS10560 | 0.64 | -1.0 | |
2,231,594 | + | +0.0 | |||
2,231,926 | - | BWI76_RS10565 | 0.13 | +0.5 | |
2,232,085 | - | BWI76_RS10565 | 0.32 | -0.3 | |
2,232,153 | + | BWI76_RS10565 | 0.40 | -0.2 | |
2,232,155 | - | BWI76_RS10565 | 0.40 | -1.3 | |
2,232,228 | - | BWI76_RS10565 | 0.49 | +0.3 | |
2,232,320 | + | BWI76_RS10565 | 0.60 | +0.3 |
Or see this region's nucleotide sequence