Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10430 and BWI76_RS10435 are separated by 44 nucleotides BWI76_RS10435 and BWI76_RS10440 are separated by 7 nucleotides BWI76_RS10440 and BWI76_RS10445 are separated by 46 nucleotides BWI76_RS10445 and BWI76_RS10450 are separated by 239 nucleotides
BWI76_RS10430: BWI76_RS10430 - thiol:disulfide interchange protein DsbG, at 2,204,877 to 2,205,635
_RS10430
BWI76_RS10435: BWI76_RS10435 - suppressor for copper-sensitivity C, at 2,205,680 to 2,206,402
_RS10435
BWI76_RS10440: BWI76_RS10440 - protein-disulfide reductase, at 2,206,410 to 2,208,434
_RS10440
BWI76_RS10445: BWI76_RS10445 - hypothetical protein, at 2,208,481 to 2,208,861
_RS10445
BWI76_RS10450: BWI76_RS10450 - tRNA-Tyr, at 2,209,101 to 2,209,175
_RS10450
Position (kb)
2206
2207
2208
2209 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2205.445 kb on + strand, within BWI76_RS10430 at 2205.491 kb on - strand, within BWI76_RS10430 at 2205.589 kb on - strand at 2205.739 kb on - strand at 2205.802 kb on + strand, within BWI76_RS10435 at 2206.100 kb on + strand, within BWI76_RS10435 at 2206.108 kb on - strand, within BWI76_RS10435 at 2206.505 kb on + strand at 2206.705 kb on + strand, within BWI76_RS10440 at 2206.789 kb on + strand, within BWI76_RS10440 at 2207.397 kb on - strand, within BWI76_RS10440 at 2207.489 kb on + strand, within BWI76_RS10440 at 2207.570 kb on + strand, within BWI76_RS10440 at 2207.661 kb on - strand, within BWI76_RS10440 at 2207.890 kb on + strand, within BWI76_RS10440 at 2207.993 kb on + strand, within BWI76_RS10440 at 2208.134 kb on - strand, within BWI76_RS10440 at 2208.164 kb on + strand, within BWI76_RS10440 at 2208.269 kb on + strand at 2208.282 kb on - strand at 2208.357 kb on - strand at 2208.532 kb on + strand, within BWI76_RS10445 at 2208.701 kb on - strand, within BWI76_RS10445 at 2208.741 kb on - strand, within BWI76_RS10445 at 2208.846 kb on + strand at 2208.854 kb on - strand at 2208.953 kb on + strand at 2208.953 kb on + strand at 2208.961 kb on - strand at 2208.961 kb on - strand at 2208.961 kb on - strand at 2208.963 kb on + strand at 2209.081 kb on - strand at 2209.112 kb on - strand, within BWI76_RS10450 at 2209.112 kb on - strand, within BWI76_RS10450 at 2209.145 kb on - strand at 2209.145 kb on - strand, within BWI76_RS10450 at 2209.152 kb on + strand, within BWI76_RS10450 at 2209.190 kb on + strand at 2209.237 kb on + strand at 2209.245 kb on - strand at 2209.326 kb on + strand at 2209.334 kb on - strand at 2209.337 kb on + strand at 2209.337 kb on + strand at 2209.337 kb on + strand at 2209.337 kb on + strand at 2209.345 kb on - strand at 2209.345 kb on - strand at 2209.345 kb on - strand at 2209.345 kb on - strand at 2209.347 kb on + strand at 2209.355 kb on - strand at 2209.395 kb on + strand at 2209.402 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 2,205,445 + BWI76_RS10430 0.75 +0.3 2,205,491 - BWI76_RS10430 0.81 -0.8 2,205,589 - -0.1 2,205,739 - -0.2 2,205,802 + BWI76_RS10435 0.17 -0.4 2,206,100 + BWI76_RS10435 0.58 -2.8 2,206,108 - BWI76_RS10435 0.59 -0.3 2,206,505 + -0.1 2,206,705 + BWI76_RS10440 0.15 -1.3 2,206,789 + BWI76_RS10440 0.19 -0.6 2,207,397 - BWI76_RS10440 0.49 -0.3 2,207,489 + BWI76_RS10440 0.53 -2.0 2,207,570 + BWI76_RS10440 0.57 -1.8 2,207,661 - BWI76_RS10440 0.62 -0.8 2,207,890 + BWI76_RS10440 0.73 -0.4 2,207,993 + BWI76_RS10440 0.78 -0.8 2,208,134 - BWI76_RS10440 0.85 -0.1 2,208,164 + BWI76_RS10440 0.87 -0.9 2,208,269 + -0.7 2,208,282 - -0.9 2,208,357 - -0.1 2,208,532 + BWI76_RS10445 0.13 -1.2 2,208,701 - BWI76_RS10445 0.58 -1.5 2,208,741 - BWI76_RS10445 0.68 -0.8 2,208,846 + -0.6 2,208,854 - -0.5 2,208,953 + +0.6 2,208,953 + -0.1 2,208,961 - -0.2 2,208,961 - -0.4 2,208,961 - +0.3 2,208,963 + +0.6 2,209,081 - +0.4 2,209,112 - BWI76_RS10450 0.15 -0.6 2,209,112 - BWI76_RS10450 0.15 +0.2 2,209,145 - -0.5 2,209,145 - BWI76_RS10450 0.59 -0.0 2,209,152 + BWI76_RS10450 0.68 -0.2 2,209,190 + -0.5 2,209,237 + +0.3 2,209,245 - +0.9 2,209,326 + +0.0 2,209,334 - +1.2 2,209,337 + +0.4 2,209,337 + -0.8 2,209,337 + -0.1 2,209,337 + -0.0 2,209,345 - -0.5 2,209,345 - +0.2 2,209,345 - +0.3 2,209,345 - -0.4 2,209,347 + -0.0 2,209,355 - +0.4 2,209,395 + -0.4 2,209,402 - -0.8
Or see this region's nucleotide sequence