Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06900 and BWI76_RS06905 are separated by 74 nucleotides BWI76_RS06905 and BWI76_RS06910 are separated by 105 nucleotides BWI76_RS06910 and BWI76_RS06915 overlap by 4 nucleotides BWI76_RS06915 and BWI76_RS06920 overlap by 4 nucleotides
BWI76_RS06900: BWI76_RS06900 - phospholipase D, at 1,449,241 to 1,450,491
_RS06900
BWI76_RS06905: BWI76_RS06905 - Cu+ exporting ATPase, at 1,450,566 to 1,453,067
_RS06905
BWI76_RS06910: BWI76_RS06910 - transcriptional regulator, at 1,453,173 to 1,453,583
_RS06910
BWI76_RS06915: BWI76_RS06915 - membrane protein, at 1,453,580 to 1,454,044
_RS06915
BWI76_RS06920: BWI76_RS06920 - paraslipin, at 1,454,041 to 1,454,958
_RS06920
Position (kb)
1450
1451
1452
1453
1454 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1449.655 kb on + strand, within BWI76_RS06900 at 1449.701 kb on - strand, within BWI76_RS06900 at 1449.796 kb on + strand, within BWI76_RS06900 at 1449.943 kb on - strand, within BWI76_RS06900 at 1449.982 kb on + strand, within BWI76_RS06900 at 1450.018 kb on + strand, within BWI76_RS06900 at 1450.258 kb on + strand, within BWI76_RS06900 at 1450.410 kb on + strand at 1450.560 kb on - strand at 1450.563 kb on + strand at 1450.563 kb on + strand at 1450.585 kb on - strand at 1450.602 kb on - strand at 1450.817 kb on + strand, within BWI76_RS06905 at 1450.974 kb on - strand, within BWI76_RS06905 at 1451.369 kb on - strand, within BWI76_RS06905 at 1451.591 kb on - strand, within BWI76_RS06905 at 1451.663 kb on + strand, within BWI76_RS06905 at 1451.716 kb on + strand, within BWI76_RS06905 at 1451.729 kb on - strand, within BWI76_RS06905 at 1451.729 kb on - strand, within BWI76_RS06905 at 1451.799 kb on + strand, within BWI76_RS06905 at 1451.904 kb on - strand, within BWI76_RS06905 at 1452.043 kb on + strand, within BWI76_RS06905 at 1452.178 kb on + strand, within BWI76_RS06905 at 1452.209 kb on + strand, within BWI76_RS06905 at 1452.651 kb on - strand, within BWI76_RS06905 at 1452.793 kb on + strand, within BWI76_RS06905 at 1452.927 kb on + strand at 1452.961 kb on + strand at 1453.010 kb on + strand at 1453.043 kb on + strand at 1453.065 kb on - strand at 1453.410 kb on - strand, within BWI76_RS06910 at 1453.612 kb on + strand at 1453.629 kb on - strand at 1453.636 kb on + strand, within BWI76_RS06915 at 1453.644 kb on - strand, within BWI76_RS06915 at 1453.724 kb on - strand, within BWI76_RS06915 at 1453.839 kb on - strand, within BWI76_RS06915 at 1453.897 kb on - strand, within BWI76_RS06915 at 1454.033 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 1,449,655 + BWI76_RS06900 0.33 -0.2 1,449,701 - BWI76_RS06900 0.37 +0.1 1,449,796 + BWI76_RS06900 0.44 +0.5 1,449,943 - BWI76_RS06900 0.56 -1.0 1,449,982 + BWI76_RS06900 0.59 +0.2 1,450,018 + BWI76_RS06900 0.62 +0.1 1,450,258 + BWI76_RS06900 0.81 -0.5 1,450,410 + +0.6 1,450,560 - +0.6 1,450,563 + -0.0 1,450,563 + -0.5 1,450,585 - -0.2 1,450,602 - -3.6 1,450,817 + BWI76_RS06905 0.10 -4.0 1,450,974 - BWI76_RS06905 0.16 -3.0 1,451,369 - BWI76_RS06905 0.32 -3.3 1,451,591 - BWI76_RS06905 0.41 -2.9 1,451,663 + BWI76_RS06905 0.44 -4.2 1,451,716 + BWI76_RS06905 0.46 -2.8 1,451,729 - BWI76_RS06905 0.46 -4.2 1,451,729 - BWI76_RS06905 0.46 -5.6 1,451,799 + BWI76_RS06905 0.49 -1.4 1,451,904 - BWI76_RS06905 0.53 -2.9 1,452,043 + BWI76_RS06905 0.59 -5.8 1,452,178 + BWI76_RS06905 0.64 -2.5 1,452,209 + BWI76_RS06905 0.66 -3.7 1,452,651 - BWI76_RS06905 0.83 -3.2 1,452,793 + BWI76_RS06905 0.89 -4.5 1,452,927 + -2.7 1,452,961 + -3.7 1,453,010 + -2.6 1,453,043 + -2.0 1,453,065 - -3.1 1,453,410 - BWI76_RS06910 0.58 -4.6 1,453,612 + +0.2 1,453,629 - +0.3 1,453,636 + BWI76_RS06915 0.12 +0.1 1,453,644 - BWI76_RS06915 0.14 +0.2 1,453,724 - BWI76_RS06915 0.31 +0.5 1,453,839 - BWI76_RS06915 0.56 -0.7 1,453,897 - BWI76_RS06915 0.68 -0.2 1,454,033 - +0.4
Or see this region's nucleotide sequence