Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04850 and BWI76_RS04855 are separated by 9 nucleotides BWI76_RS04855 and BWI76_RS04860 are separated by 31 nucleotides BWI76_RS04860 and BWI76_RS04865 overlap by 1 nucleotides
BWI76_RS04850: BWI76_RS04850 - N-acetylmuramoyl-L-alanine amidase, at 1,013,104 to 1,013,655
_RS04850
BWI76_RS04855: BWI76_RS04855 - regulatory protein AmpE, at 1,013,665 to 1,014,519
_RS04855
BWI76_RS04860: BWI76_RS04860 - alpha-N-arabinofuranosidase, at 1,014,551 to 1,015,501
_RS04860
BWI76_RS04865: BWI76_RS04865 - MFS transporter, at 1,015,501 to 1,016,907
_RS04865
Position (kb)
1014
1015
1016 Strain fitness (log2 ratio)
-1
0
1 at 1013.613 kb on - strand at 1013.675 kb on + strand at 1013.681 kb on - strand at 1013.708 kb on + strand at 1013.716 kb on - strand at 1013.716 kb on - strand at 1013.760 kb on - strand, within BWI76_RS04855 at 1013.784 kb on + strand, within BWI76_RS04855 at 1013.844 kb on + strand, within BWI76_RS04855 at 1013.904 kb on + strand, within BWI76_RS04855 at 1013.904 kb on - strand, within BWI76_RS04855 at 1013.917 kb on + strand at 1014.080 kb on - strand, within BWI76_RS04855 at 1014.278 kb on + strand, within BWI76_RS04855 at 1014.395 kb on - strand, within BWI76_RS04855 at 1014.681 kb on + strand, within BWI76_RS04860 at 1014.735 kb on + strand, within BWI76_RS04860 at 1014.748 kb on - strand, within BWI76_RS04860 at 1014.824 kb on - strand, within BWI76_RS04860 at 1014.841 kb on - strand, within BWI76_RS04860 at 1015.293 kb on - strand, within BWI76_RS04860 at 1015.293 kb on - strand, within BWI76_RS04860 at 1015.366 kb on + strand, within BWI76_RS04860 at 1015.374 kb on - strand, within BWI76_RS04860 at 1015.400 kb on + strand, within BWI76_RS04860 at 1015.493 kb on + strand at 1015.562 kb on - strand at 1015.683 kb on + strand, within BWI76_RS04865 at 1015.683 kb on - strand, within BWI76_RS04865 at 1015.885 kb on + strand, within BWI76_RS04865 at 1015.893 kb on - strand at 1015.893 kb on - strand, within BWI76_RS04865 at 1015.893 kb on - strand, within BWI76_RS04865 at 1015.893 kb on - strand, within BWI76_RS04865 at 1016.033 kb on - strand, within BWI76_RS04865 at 1016.093 kb on - strand, within BWI76_RS04865 at 1016.093 kb on - strand, within BWI76_RS04865 at 1016.132 kb on + strand, within BWI76_RS04865 at 1016.149 kb on - strand, within BWI76_RS04865 at 1016.274 kb on - strand at 1016.367 kb on - strand, within BWI76_RS04865 at 1016.380 kb on - strand, within BWI76_RS04865
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 3 mM remove 1,013,613 - -0.6 1,013,675 + -0.2 1,013,681 - +0.6 1,013,708 + -0.2 1,013,716 - -0.3 1,013,716 - +0.4 1,013,760 - BWI76_RS04855 0.11 +0.1 1,013,784 + BWI76_RS04855 0.14 +0.4 1,013,844 + BWI76_RS04855 0.21 +0.0 1,013,904 + BWI76_RS04855 0.28 +0.3 1,013,904 - BWI76_RS04855 0.28 +1.4 1,013,917 + +1.4 1,014,080 - BWI76_RS04855 0.49 -0.4 1,014,278 + BWI76_RS04855 0.72 +0.4 1,014,395 - BWI76_RS04855 0.85 +0.2 1,014,681 + BWI76_RS04860 0.14 -1.7 1,014,735 + BWI76_RS04860 0.19 -0.6 1,014,748 - BWI76_RS04860 0.21 -0.0 1,014,824 - BWI76_RS04860 0.29 +0.0 1,014,841 - BWI76_RS04860 0.30 -0.1 1,015,293 - BWI76_RS04860 0.78 -0.0 1,015,293 - BWI76_RS04860 0.78 +0.2 1,015,366 + BWI76_RS04860 0.86 +0.1 1,015,374 - BWI76_RS04860 0.87 -0.1 1,015,400 + BWI76_RS04860 0.89 -0.5 1,015,493 + +0.5 1,015,562 - -1.3 1,015,683 + BWI76_RS04865 0.13 -0.7 1,015,683 - BWI76_RS04865 0.13 +1.0 1,015,885 + BWI76_RS04865 0.27 -0.6 1,015,893 - -0.7 1,015,893 - BWI76_RS04865 0.28 +0.4 1,015,893 - BWI76_RS04865 0.28 +0.1 1,015,893 - BWI76_RS04865 0.28 -0.2 1,016,033 - BWI76_RS04865 0.38 +0.5 1,016,093 - BWI76_RS04865 0.42 +0.1 1,016,093 - BWI76_RS04865 0.42 -0.3 1,016,132 + BWI76_RS04865 0.45 +0.1 1,016,149 - BWI76_RS04865 0.46 -0.6 1,016,274 - +1.3 1,016,367 - BWI76_RS04865 0.62 -0.7 1,016,380 - BWI76_RS04865 0.62 +1.5
Or see this region's nucleotide sequence