Experiment: 4C survival; 672 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25235 and AO356_25240 are separated by 31 nucleotides AO356_25240 and AO356_25245 overlap by 4 nucleotides AO356_25245 and AO356_25250 are separated by 136 nucleotides
AO356_25235: AO356_25235 - anaerobic ribonucleoside-triphosphate reductase, at 5,713,064 to 5,715,079
_25235
AO356_25240: AO356_25240 - oxidoreductase, at 5,715,111 to 5,715,272
_25240
AO356_25245: AO356_25245 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 5,715,269 to 5,715,964
_25245
AO356_25250: AO356_25250 - hypothetical protein, at 5,716,101 to 5,717,468
_25250
Position (kb) 5715
5716 Strain fitness (log2 ratio) -1
0
1 at 5714.334 kb on - strand, within AO356_25235 at 5714.339 kb on + strand, within AO356_25235 at 5714.454 kb on - strand, within AO356_25235 at 5714.454 kb on - strand, within AO356_25235 at 5714.460 kb on - strand, within AO356_25235 at 5714.471 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.690 kb on + strand, within AO356_25235 at 5714.690 kb on + strand, within AO356_25235 at 5714.759 kb on + strand, within AO356_25235 at 5714.762 kb on + strand, within AO356_25235 at 5714.763 kb on - strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.874 kb on - strand, within AO356_25235 at 5714.996 kb on + strand at 5715.740 kb on + strand, within AO356_25245 at 5715.741 kb on - strand, within AO356_25245 at 5715.958 kb on + strand at 5715.958 kb on + strand at 5715.959 kb on - strand at 5715.959 kb on - strand at 5715.959 kb on - strand at 5716.094 kb on + strand at 5716.095 kb on - strand at 5716.095 kb on - strand at 5716.102 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 672 hrs remove 5,714,334 - AO356_25235 0.63 -0.0 5,714,339 + AO356_25235 0.63 -0.9 5,714,454 - AO356_25235 0.69 -0.6 5,714,454 - AO356_25235 0.69 +0.8 5,714,460 - AO356_25235 0.69 -0.4 5,714,471 + AO356_25235 0.70 +0.4 5,714,654 + AO356_25235 0.79 -0.6 5,714,654 + AO356_25235 0.79 -0.0 5,714,654 + AO356_25235 0.79 +0.3 5,714,655 - AO356_25235 0.79 -0.3 5,714,655 - AO356_25235 0.79 -0.3 5,714,655 - AO356_25235 0.79 +0.6 5,714,690 + AO356_25235 0.81 -0.5 5,714,690 + AO356_25235 0.81 +0.0 5,714,759 + AO356_25235 0.84 +0.8 5,714,762 + AO356_25235 0.84 +0.5 5,714,763 - AO356_25235 0.84 -0.7 5,714,873 + AO356_25235 0.90 +0.0 5,714,873 + AO356_25235 0.90 -0.6 5,714,873 + AO356_25235 0.90 +0.3 5,714,874 - AO356_25235 0.90 +1.0 5,714,996 + +0.4 5,715,740 + AO356_25245 0.68 -0.4 5,715,741 - AO356_25245 0.68 -0.2 5,715,958 + +0.5 5,715,958 + +0.3 5,715,959 - -1.0 5,715,959 - -0.4 5,715,959 - +0.2 5,716,094 + +0.1 5,716,095 - +0.4 5,716,095 - -0.3 5,716,102 + -0.0
Or see this region's nucleotide sequence