Experiment: 4C survival; 672 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24240 and AO356_24245 are separated by 235 nucleotides AO356_24245 and AO356_24250 are separated by 42 nucleotides AO356_24250 and AO356_24255 are separated by 2 nucleotides
AO356_24240: AO356_24240 - ABC transporter ATP-binding protein, at 5,438,602 to 5,440,305
_24240
AO356_24245: AO356_24245 - siderophore-iron reductase FhuF, at 5,440,541 to 5,441,194
_24245
AO356_24250: AO356_24250 - ABC transporter ATP-binding protein, at 5,441,237 to 5,442,883
_24250
AO356_24255: AO356_24255 - non-ribosomal peptide synthetase, at 5,442,886 to 5,446,737
_24255
Position (kb)
5441
5442
5443 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5440.389 kb on + strand at 5440.459 kb on - strand at 5440.614 kb on - strand, within AO356_24245 at 5440.614 kb on - strand, within AO356_24245 at 5440.778 kb on + strand, within AO356_24245 at 5440.779 kb on - strand, within AO356_24245 at 5441.032 kb on - strand, within AO356_24245 at 5441.073 kb on - strand, within AO356_24245 at 5441.165 kb on + strand at 5441.174 kb on + strand at 5441.174 kb on + strand at 5441.174 kb on + strand at 5441.175 kb on - strand at 5441.175 kb on - strand at 5441.175 kb on - strand at 5441.175 kb on - strand at 5441.175 kb on - strand at 5441.175 kb on - strand at 5441.175 kb on - strand at 5441.175 kb on - strand at 5441.175 kb on - strand at 5441.283 kb on - strand at 5441.283 kb on - strand at 5441.337 kb on + strand at 5441.406 kb on + strand, within AO356_24250 at 5441.406 kb on + strand, within AO356_24250 at 5441.563 kb on + strand, within AO356_24250 at 5441.564 kb on - strand, within AO356_24250 at 5441.814 kb on - strand, within AO356_24250 at 5441.887 kb on - strand, within AO356_24250 at 5441.890 kb on + strand, within AO356_24250 at 5441.891 kb on - strand, within AO356_24250 at 5442.080 kb on - strand, within AO356_24250 at 5442.082 kb on - strand, within AO356_24250 at 5442.153 kb on + strand, within AO356_24250 at 5442.153 kb on + strand, within AO356_24250 at 5442.153 kb on + strand, within AO356_24250 at 5442.153 kb on + strand, within AO356_24250 at 5442.154 kb on - strand, within AO356_24250 at 5442.154 kb on - strand, within AO356_24250 at 5442.189 kb on + strand, within AO356_24250 at 5442.190 kb on - strand, within AO356_24250 at 5442.463 kb on - strand, within AO356_24250 at 5442.746 kb on + strand at 5442.747 kb on - strand at 5442.961 kb on - strand at 5442.961 kb on - strand at 5443.125 kb on + strand at 5443.125 kb on + strand at 5443.125 kb on + strand at 5443.126 kb on - strand at 5443.126 kb on - strand at 5443.523 kb on + strand, within AO356_24255 at 5443.523 kb on + strand, within AO356_24255 at 5443.524 kb on - strand, within AO356_24255
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 672 hrs remove 5,440,389 + -2.0 5,440,459 - -0.0 5,440,614 - AO356_24245 0.11 -1.5 5,440,614 - AO356_24245 0.11 -2.2 5,440,778 + AO356_24245 0.36 -0.7 5,440,779 - AO356_24245 0.36 +0.0 5,441,032 - AO356_24245 0.75 +0.1 5,441,073 - AO356_24245 0.81 -1.1 5,441,165 + -1.7 5,441,174 + -0.1 5,441,174 + -0.5 5,441,174 + -0.4 5,441,175 - +0.8 5,441,175 - +1.5 5,441,175 - +0.3 5,441,175 - +0.2 5,441,175 - -0.9 5,441,175 - -1.3 5,441,175 - +1.8 5,441,175 - +0.5 5,441,175 - +0.4 5,441,283 - +0.3 5,441,283 - -0.2 5,441,337 + +0.3 5,441,406 + AO356_24250 0.10 -0.7 5,441,406 + AO356_24250 0.10 -1.2 5,441,563 + AO356_24250 0.20 +0.7 5,441,564 - AO356_24250 0.20 -0.4 5,441,814 - AO356_24250 0.35 -0.0 5,441,887 - AO356_24250 0.39 +0.3 5,441,890 + AO356_24250 0.40 -0.3 5,441,891 - AO356_24250 0.40 -0.2 5,442,080 - AO356_24250 0.51 -0.9 5,442,082 - AO356_24250 0.51 -0.8 5,442,153 + AO356_24250 0.56 +0.6 5,442,153 + AO356_24250 0.56 +0.6 5,442,153 + AO356_24250 0.56 +0.0 5,442,153 + AO356_24250 0.56 +0.3 5,442,154 - AO356_24250 0.56 +1.2 5,442,154 - AO356_24250 0.56 -0.3 5,442,189 + AO356_24250 0.58 -0.1 5,442,190 - AO356_24250 0.58 -1.0 5,442,463 - AO356_24250 0.74 -0.3 5,442,746 + -0.1 5,442,747 - -0.6 5,442,961 - +0.5 5,442,961 - +1.4 5,443,125 + +0.8 5,443,125 + +0.7 5,443,125 + +0.1 5,443,126 - +0.5 5,443,126 - +0.4 5,443,523 + AO356_24255 0.17 -0.3 5,443,523 + AO356_24255 0.17 +0.3 5,443,524 - AO356_24255 0.17 +0.0
Or see this region's nucleotide sequence