Experiment: 4C survival; 672 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17330 and AO356_17335 are separated by 256 nucleotides AO356_17335 and AO356_17340 overlap by 4 nucleotides AO356_17340 and AO356_17345 are separated by 3 nucleotides AO356_17345 and AO356_17350 are separated by 252 nucleotides
AO356_17330: AO356_17330 - ATPase, at 3,907,016 to 3,908,410
_17330
AO356_17335: AO356_17335 - molybdenum cofactor biosynthesis protein MoaC, at 3,908,667 to 3,909,140
_17335
AO356_17340: AO356_17340 - molybdenum cofactor biosynthesis protein MoaD, at 3,909,137 to 3,909,379
_17340
AO356_17345: AO356_17345 - molybdenum cofactor biosynthesis protein MoaE, at 3,909,383 to 3,909,835
_17345
AO356_17350: AO356_17350 - ABC transporter substrate-binding protein, at 3,910,088 to 3,910,864
_17350
Position (kb)
3908
3909
3910 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3907.793 kb on + strand, within AO356_17330 at 3907.794 kb on - strand, within AO356_17330 at 3907.794 kb on - strand, within AO356_17330 at 3907.794 kb on - strand, within AO356_17330 at 3908.087 kb on + strand, within AO356_17330 at 3908.088 kb on - strand, within AO356_17330 at 3908.088 kb on - strand, within AO356_17330 at 3908.088 kb on - strand, within AO356_17330 at 3908.088 kb on - strand, within AO356_17330 at 3908.088 kb on - strand, within AO356_17330 at 3908.088 kb on - strand, within AO356_17330 at 3908.088 kb on - strand, within AO356_17330 at 3908.088 kb on - strand, within AO356_17330 at 3908.129 kb on + strand, within AO356_17330 at 3908.129 kb on + strand, within AO356_17330 at 3908.129 kb on + strand, within AO356_17330 at 3908.129 kb on + strand, within AO356_17330 at 3908.129 kb on + strand, within AO356_17330 at 3908.129 kb on + strand, within AO356_17330 at 3908.130 kb on - strand, within AO356_17330 at 3908.130 kb on - strand, within AO356_17330 at 3908.130 kb on - strand, within AO356_17330 at 3908.130 kb on - strand, within AO356_17330 at 3908.130 kb on - strand, within AO356_17330 at 3908.280 kb on - strand at 3908.309 kb on + strand at 3908.309 kb on + strand at 3908.309 kb on + strand at 3908.310 kb on - strand at 3908.310 kb on - strand at 3908.368 kb on - strand at 3908.408 kb on + strand at 3908.409 kb on - strand at 3908.460 kb on - strand at 3908.499 kb on + strand at 3908.499 kb on + strand at 3908.513 kb on + strand at 3908.513 kb on + strand at 3908.513 kb on + strand at 3908.514 kb on - strand at 3908.635 kb on + strand at 3908.635 kb on + strand at 3908.635 kb on + strand at 3908.635 kb on + strand at 3908.636 kb on - strand at 3908.702 kb on + strand at 3908.703 kb on - strand at 3908.703 kb on - strand at 3908.703 kb on - strand at 3908.703 kb on - strand at 3909.036 kb on + strand, within AO356_17335 at 3909.036 kb on + strand, within AO356_17335 at 3909.036 kb on + strand, within AO356_17335 at 3909.036 kb on + strand, within AO356_17335 at 3909.036 kb on + strand, within AO356_17335 at 3909.036 kb on + strand, within AO356_17335 at 3909.036 kb on + strand, within AO356_17335 at 3909.037 kb on - strand, within AO356_17335 at 3909.037 kb on - strand, within AO356_17335 at 3909.037 kb on - strand, within AO356_17335 at 3909.037 kb on - strand, within AO356_17335 at 3909.037 kb on - strand, within AO356_17335 at 3909.145 kb on + strand at 3909.725 kb on + strand, within AO356_17345 at 3909.726 kb on - strand, within AO356_17345 at 3909.833 kb on + strand at 3909.833 kb on + strand at 3909.834 kb on - strand at 3909.845 kb on + strand at 3909.845 kb on + strand at 3909.898 kb on + strand at 3909.898 kb on + strand at 3909.898 kb on + strand at 3909.898 kb on + strand at 3909.899 kb on - strand at 3909.899 kb on - strand at 3909.899 kb on - strand at 3909.906 kb on + strand at 3909.906 kb on + strand at 3909.906 kb on + strand at 3909.907 kb on - strand at 3909.907 kb on - strand at 3909.907 kb on - strand at 3909.907 kb on - strand at 3909.907 kb on - strand at 3909.998 kb on + strand at 3909.999 kb on - strand at 3910.022 kb on - strand at 3910.023 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 672 hrs remove 3,907,793 + AO356_17330 0.56 -1.5 3,907,794 - AO356_17330 0.56 -0.6 3,907,794 - AO356_17330 0.56 -0.3 3,907,794 - AO356_17330 0.56 +0.2 3,908,087 + AO356_17330 0.77 +0.3 3,908,088 - AO356_17330 0.77 -0.7 3,908,088 - AO356_17330 0.77 -0.3 3,908,088 - AO356_17330 0.77 -0.2 3,908,088 - AO356_17330 0.77 +0.4 3,908,088 - AO356_17330 0.77 -0.2 3,908,088 - AO356_17330 0.77 -0.2 3,908,088 - AO356_17330 0.77 -0.9 3,908,088 - AO356_17330 0.77 +0.4 3,908,129 + AO356_17330 0.80 -0.3 3,908,129 + AO356_17330 0.80 -0.1 3,908,129 + AO356_17330 0.80 +0.8 3,908,129 + AO356_17330 0.80 +1.1 3,908,129 + AO356_17330 0.80 +0.2 3,908,129 + AO356_17330 0.80 +0.8 3,908,130 - AO356_17330 0.80 -0.6 3,908,130 - AO356_17330 0.80 -0.1 3,908,130 - AO356_17330 0.80 +0.5 3,908,130 - AO356_17330 0.80 +0.4 3,908,130 - AO356_17330 0.80 -0.4 3,908,280 - +0.7 3,908,309 + +0.5 3,908,309 + -0.2 3,908,309 + +0.1 3,908,310 - -2.5 3,908,310 - +0.8 3,908,368 - -0.2 3,908,408 + -0.1 3,908,409 - -0.0 3,908,460 - -0.3 3,908,499 + -0.3 3,908,499 + -0.7 3,908,513 + +0.5 3,908,513 + -0.3 3,908,513 + +0.3 3,908,514 - +0.1 3,908,635 + +0.6 3,908,635 + -0.1 3,908,635 + +0.7 3,908,635 + -2.4 3,908,636 - -0.6 3,908,702 + +0.4 3,908,703 - -0.4 3,908,703 - +1.0 3,908,703 - -0.1 3,908,703 - +0.1 3,909,036 + AO356_17335 0.78 +0.6 3,909,036 + AO356_17335 0.78 -0.2 3,909,036 + AO356_17335 0.78 +1.1 3,909,036 + AO356_17335 0.78 +1.4 3,909,036 + AO356_17335 0.78 +0.7 3,909,036 + AO356_17335 0.78 -0.1 3,909,036 + AO356_17335 0.78 -0.1 3,909,037 - AO356_17335 0.78 -0.1 3,909,037 - AO356_17335 0.78 -0.4 3,909,037 - AO356_17335 0.78 +0.4 3,909,037 - AO356_17335 0.78 -0.3 3,909,037 - AO356_17335 0.78 +0.2 3,909,145 + -1.0 3,909,725 + AO356_17345 0.75 -0.3 3,909,726 - AO356_17345 0.76 -1.0 3,909,833 + +0.4 3,909,833 + -0.1 3,909,834 - -0.0 3,909,845 + -3.0 3,909,845 + +0.3 3,909,898 + +0.1 3,909,898 + -0.6 3,909,898 + +0.6 3,909,898 + +0.2 3,909,899 - +0.3 3,909,899 - +0.8 3,909,899 - -0.4 3,909,906 + -0.2 3,909,906 + -0.2 3,909,906 + +0.6 3,909,907 - +0.1 3,909,907 - +0.7 3,909,907 - -1.3 3,909,907 - +1.0 3,909,907 - +0.6 3,909,998 + -0.1 3,909,999 - +0.2 3,910,022 - -0.6 3,910,023 + -0.2
Or see this region's nucleotide sequence