Strain Fitness in Pantoea sp. MT58 around IAI47_08910

Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,881,936	+		IAI47_08905	0.61	-0.5
1,881,953	+		IAI47_08905	0.63	-0.2
1,881,953	+		IAI47_08905	0.63	-2.0
1,881,987	-		IAI47_08905	0.65	-0.6
1,882,018	-		IAI47_08905	0.67	+0.0
1,882,103	+		IAI47_08905	0.73	+0.6
1,882,103	+		IAI47_08905	0.73	+0.6
1,882,103	+		IAI47_08905	0.73	+1.4
1,882,103	+		IAI47_08905	0.73	+1.2
1,882,103	+		IAI47_08905	0.73	-0.1
1,882,103	+		IAI47_08905	0.73	+0.2
1,882,103	+		IAI47_08905	0.73	+1.3
1,882,103	+		IAI47_08905	0.73	+1.0
1,882,103	+		IAI47_08905	0.73	-1.0
1,882,103	+		IAI47_08905	0.73	-0.1
1,882,104	-		IAI47_08905	0.73	+0.6
1,882,104	-		IAI47_08905	0.73	+1.4
1,882,104	-		IAI47_08905	0.73	+1.6
1,882,104	-		IAI47_08905	0.73	-1.3
1,882,104	-		IAI47_08905	0.73	+0.6
1,882,104	-		IAI47_08905	0.73	+1.2
1,882,104	-		IAI47_08905	0.73	+0.6
1,882,104	-		IAI47_08905	0.73	+0.3
1,882,104	-		IAI47_08905	0.73	-0.7
1,882,104	-		IAI47_08905	0.73	-2.6
1,882,189	+		IAI47_08905	0.79	-0.4
1,882,190	-		IAI47_08905	0.79	-0.8
1,882,190	-		IAI47_08905	0.79	-0.4
1,882,198	-		IAI47_08905	0.79	-0.0
1,882,210	-		IAI47_08905	0.80	-0.8
1,882,239	+		IAI47_08905	0.82	-2.6
1,882,239	+		IAI47_08905	0.82	-0.6
1,882,239	+		IAI47_08905	0.82	-1.4
1,882,239	+		IAI47_08905	0.82	+0.2
1,882,239	+		IAI47_08905	0.82	-0.5
1,882,239	+		IAI47_08905	0.82	+1.6
1,882,239	+		IAI47_08905	0.82	+0.5
1,882,239	+		IAI47_08905	0.82	-0.4
1,882,239	+		IAI47_08905	0.82	-0.4
1,882,239	+		IAI47_08905	0.82	-0.5
1,882,239	+		IAI47_08905	0.82	+1.6
1,882,239	+		IAI47_08905	0.82	+0.3
1,882,240	-		IAI47_08905	0.82	+0.6
1,882,240	-		IAI47_08905	0.82	+1.6
1,882,240	-		IAI47_08905	0.82	+1.4
1,882,240	-		IAI47_08905	0.82	-0.6
1,882,240	-		IAI47_08905	0.82	-1.5
1,882,240	-		IAI47_08905	0.82	-0.6
1,882,240	-		IAI47_08905	0.82	+0.4
1,882,240	-		IAI47_08905	0.82	-0.4
1,882,240	-		IAI47_08905	0.82	-1.2
1,882,240	-		IAI47_08905	0.82	-0.5
1,882,240	-		IAI47_08905	0.82	-1.2
1,882,240	-		IAI47_08905	0.82	-1.2
1,882,240	-		IAI47_08905	0.82	-0.4
1,882,241	+		IAI47_08905	0.82	+0.2
1,882,242	-		IAI47_08905	0.82	-1.0
1,882,242	-		IAI47_08905	0.82	-0.3
1,882,242	-		IAI47_08905	0.82	-2.0
1,882,242	-		IAI47_08905	0.82	-0.2
1,882,256	-		IAI47_08905	0.83	+0.2
1,882,256	-		IAI47_08905	0.83	-1.3
1,882,256	-		IAI47_08905	0.83	+0.3
1,882,256	-		IAI47_08905	0.83	+0.6
1,882,279	+		IAI47_08905	0.85	-0.9
1,882,279	+		IAI47_08905	0.85	+2.2
1,882,280	-		IAI47_08905	0.85	+2.7
1,882,280	-		IAI47_08905	0.85	-0.2
1,882,280	-		IAI47_08905	0.85	+0.5
1,882,280	-		IAI47_08905	0.85	-1.1
1,882,287	+		IAI47_08905	0.85	+0.5
1,882,287	+		IAI47_08905	0.85	-1.9
1,882,288	-		IAI47_08905	0.85	-0.3
1,882,288	-		IAI47_08905	0.85	-0.3
1,882,288	-		IAI47_08905	0.85	+2.2
1,882,290	+		IAI47_08905	0.86	+0.4
1,882,290	+		IAI47_08905	0.86	-0.4
1,882,291	-		IAI47_08905	0.86	+0.2
1,882,291	-		IAI47_08905	0.86	-1.6
1,882,291	-		IAI47_08905	0.86	+0.6
1,882,291	-		IAI47_08905	0.86	-1.3
1,882,310	+		IAI47_08905	0.87	-0.8
1,882,332	+		IAI47_08905	0.88	+0.7
1,882,333	-		IAI47_08905	0.89	+0.2
1,882,333	-		IAI47_08905	0.89	+0.2
1,882,339	-		IAI47_08905	0.89	+1.2
1,882,356	+				-0.4
1,882,356	+				-1.3
1,882,356	+				-1.3
1,882,357	-				+0.6
1,882,363	+				-1.0
1,882,364	-				-0.0
1,882,364	-				+0.4
1,882,364	-				-0.2
1,882,364	-				-0.4
1,882,395	+				-0.9
1,882,484	-				-0.0
1,882,484	-				+0.4
1,882,491	+				-2.0
1,882,492	-				-0.4
1,882,492	-				+0.7
1,882,492	-				+0.9
1,882,492	-				+0.4
1,882,492	-				-2.2
1,882,492	-				-0.8
1,882,492	-				-0.4
1,882,492	-				+1.2
1,882,492	-				+0.6
1,882,492	-				-0.4
1,882,492	-				+1.1
1,882,492	-				+0.2
1,882,523	+				+0.2
1,882,523	+				+1.2
1,882,688	+				-0.3
1,882,688	+				-1.6
1,882,689	-				-1.0
1,882,699	+				+0.8
1,882,699	+				-0.2
1,882,699	+				+0.8
1,882,699	+				+0.2
1,882,712	+				+1.3
1,882,713	-				+1.7
1,882,713	-				-0.8
1,882,759	+				-0.0
1,882,781	-				-0.2
1,882,789	+				-1.8
1,882,790	-				+1.2
1,882,805	+				-0.8
1,882,805	+				+0.2
1,882,807	+				+0.2
1,882,808	-				+1.2
1,882,812	-				+0.6
1,882,812	-				-0.4
1,882,832	+				-0.8
1,882,916	-		IAI47_08910	0.17	+0.6
1,882,920	+		IAI47_08910	0.18	+0.2
1,882,920	+		IAI47_08910	0.18	-1.2
1,882,921	-		IAI47_08910	0.19	-1.0
1,882,976	-		IAI47_08910	0.42	+0.2
1,882,976	-		IAI47_08910	0.42	-1.0
1,882,976	-		IAI47_08910	0.42	+0.4
1,882,976	-		IAI47_08910	0.42	+0.0
1,882,976	-		IAI47_08910	0.42	-1.0
1,883,003	-		IAI47_08910	0.54	+0.4
1,883,006	+		IAI47_08910	0.55	-0.8
1,883,017	+		IAI47_08910	0.60	-1.9
1,883,095	+				+0.2
1,883,127	+				-1.2
1,883,135	+				+1.2
1,883,135	+				-0.2
1,883,135	+				-1.6
1,883,136	-				+0.6
1,883,143	+				-1.2
1,883,144	-				-1.0
1,883,144	-				-0.6
1,883,144	-				+0.8
1,883,150	-				+0.3
1,883,154	+				+0.2
1,883,154	+				+0.2
1,883,190	+				-1.7
1,883,191	-				-0.6
1,883,230	+				-0.8
1,883,230	+				-0.6
1,883,230	+				+1.2
1,883,230	+				+2.2
1,883,231	-				-0.0
1,883,231	-				+0.2
1,883,231	-				-0.3
1,883,377	-		IAI47_08915	0.11	-0.0
1,883,420	-		IAI47_08915	0.13	-0.6
1,883,420	-		IAI47_08915	0.13	-0.8
1,883,518	+		IAI47_08915	0.19	-0.4
1,883,518	+		IAI47_08915	0.19	-0.5
1,883,518	+		IAI47_08915	0.19	-0.5
1,883,518	+		IAI47_08915	0.19	+2.0
1,883,519	-		IAI47_08915	0.19	-0.1
1,883,519	-		IAI47_08915	0.19	+0.6
1,883,590	+		IAI47_08915	0.23	+2.2
1,883,591	-		IAI47_08915	0.23	+0.9
1,883,662	-		IAI47_08915	0.27	+1.9
1,883,662	-		IAI47_08915	0.27	+0.9
1,883,695	+		IAI47_08915	0.29	+0.2
1,883,695	+		IAI47_08915	0.29	-1.4
1,883,696	-		IAI47_08915	0.29	-0.2
1,883,716	+		IAI47_08915	0.30	-0.1
1,883,716	+		IAI47_08915	0.30	+0.0
1,883,716	+		IAI47_08915	0.30	-0.7
1,883,717	-		IAI47_08915	0.31	+0.2
1,883,717	-		IAI47_08915	0.31	-0.6
1,883,717	-		IAI47_08915	0.31	+0.4
1,883,717	-		IAI47_08915	0.31	-1.5
1,883,776	+		IAI47_08915	0.34	-1.0
1,883,776	+		IAI47_08915	0.34	-0.8
1,883,777	-		IAI47_08915	0.34	+1.2
1,883,777	-		IAI47_08915	0.34	-2.0
1,883,819	-		IAI47_08915	0.36	+1.2
1,883,819	-		IAI47_08915	0.36	+2.2
1,883,821	+		IAI47_08915	0.37	+3.3
1,883,821	+		IAI47_08915	0.37	-0.2
1,883,821	+		IAI47_08915	0.37	+0.8
1,883,821	+		IAI47_08915	0.37	-1.2
1,883,843	+		IAI47_08915	0.38	-0.4
1,883,844	-		IAI47_08915	0.38	+0.2
1,883,876	-		IAI47_08915	0.40	+0.6
1,883,894	+		IAI47_08915	0.41	-0.2
1,883,894	+		IAI47_08915	0.41	+0.2
1,883,894	+		IAI47_08915	0.41	-0.3
1,883,894	+		IAI47_08915	0.41	+0.5
1,883,894	+		IAI47_08915	0.41	-0.2
1,883,895	-		IAI47_08915	0.41	+1.9
1,883,895	-		IAI47_08915	0.41	+0.2
1,883,895	-		IAI47_08915	0.41	+0.2
1,883,911	+		IAI47_08915	0.42	+0.6
1,883,959	+		IAI47_08915	0.45	-1.7
1,883,960	-		IAI47_08915	0.45	-1.2
1,884,097	+		IAI47_08915	0.53	+0.6