Strain Fitness in Pantoea sp. MT58 around IAI47_06520

Experiment: Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,356,237	-		IAI47_06515	0.12	-0.6
1,356,237	-		IAI47_06515	0.12	+0.5
1,356,237	-		IAI47_06515	0.12	-1.0
1,356,275	+		IAI47_06515	0.15	-0.3
1,356,275	+		IAI47_06515	0.15	+1.2
1,356,275	+		IAI47_06515	0.15	-0.4
1,356,275	+		IAI47_06515	0.15	+0.6
1,356,275	+		IAI47_06515	0.15	+0.4
1,356,276	-		IAI47_06515	0.15	-1.2
1,356,276	-		IAI47_06515	0.15	-1.7
1,356,276	-		IAI47_06515	0.15	+1.7
1,356,276	-		IAI47_06515	0.15	-1.0
1,356,276	-		IAI47_06515	0.15	+1.2
1,356,344	+		IAI47_06515	0.21	+1.7
1,356,344	+		IAI47_06515	0.21	-0.3
1,356,357	+		IAI47_06515	0.22	-0.6
1,356,357	+		IAI47_06515	0.22	+0.2
1,356,357	+		IAI47_06515	0.22	-0.2
1,356,358	-		IAI47_06515	0.23	+0.7
1,356,446	+		IAI47_06515	0.30	+1.5
1,356,446	+		IAI47_06515	0.30	+0.1
1,356,447	-		IAI47_06515	0.31	+0.5
1,356,447	-		IAI47_06515	0.31	-1.3
1,356,454	+		IAI47_06515	0.31	-0.8
1,356,454	+		IAI47_06515	0.31	+0.1
1,356,454	+		IAI47_06515	0.31	+0.2
1,356,455	-		IAI47_06515	0.31	-0.8
1,356,455	-		IAI47_06515	0.31	+2.1
1,356,465	+		IAI47_06515	0.32	+0.9
1,356,470	+		IAI47_06515	0.33	-2.5
1,356,470	+		IAI47_06515	0.33	+0.0
1,356,470	+		IAI47_06515	0.33	-0.5
1,356,470	+		IAI47_06515	0.33	-0.3
1,356,470	+		IAI47_06515	0.33	-0.2
1,356,470	+		IAI47_06515	0.33	+0.0
1,356,470	+		IAI47_06515	0.33	-1.1
1,356,471	-		IAI47_06515	0.33	-0.6
1,356,471	-		IAI47_06515	0.33	-1.2
1,356,471	-		IAI47_06515	0.33	-2.3
1,356,471	-		IAI47_06515	0.33	-1.8
1,356,471	-		IAI47_06515	0.33	-2.6
1,356,471	-		IAI47_06515	0.33	-0.8
1,356,471	-		IAI47_06515	0.33	-1.1
1,356,471	-		IAI47_06515	0.33	-1.8
1,356,518	-		IAI47_06515	0.37	-0.6
1,356,521	+		IAI47_06515	0.37	+3.5
1,356,521	+		IAI47_06515	0.37	-0.8
1,356,521	+		IAI47_06515	0.37	-1.2
1,356,521	+		IAI47_06515	0.37	+0.9
1,356,521	+		IAI47_06515	0.37	-0.3
1,356,521	+		IAI47_06515	0.37	+1.2
1,356,521	+		IAI47_06515	0.37	+0.4
1,356,521	+		IAI47_06515	0.37	+0.9
1,356,522	-		IAI47_06515	0.37	-1.5
1,356,522	-		IAI47_06515	0.37	-2.1
1,356,522	-		IAI47_06515	0.37	-1.2
1,356,522	-		IAI47_06515	0.37	-1.8
1,356,522	-		IAI47_06515	0.37	-0.6
1,356,522	-		IAI47_06515	0.37	-1.8
1,356,532	+		IAI47_06515	0.38	-0.1
1,356,533	-		IAI47_06515	0.38	-0.1
1,356,542	+		IAI47_06515	0.39	+0.7
1,356,543	-		IAI47_06515	0.39	-0.3
1,356,543	-		IAI47_06515	0.39	-2.0
1,356,575	-		IAI47_06515	0.42	-0.3
1,356,575	-		IAI47_06515	0.42	-2.6
1,356,624	-		IAI47_06515	0.46	-1.8
1,356,713	+		IAI47_06515	0.54	+0.3
1,356,713	+		IAI47_06515	0.54	+0.6
1,356,713	+		IAI47_06515	0.54	-0.7
1,356,713	+		IAI47_06515	0.54	-1.1
1,356,713	+		IAI47_06515	0.54	-0.2
1,356,713	+		IAI47_06515	0.54	-0.7
1,356,713	+		IAI47_06515	0.54	-0.1
1,356,713	+		IAI47_06515	0.54	-0.8
1,356,713	+		IAI47_06515	0.54	-1.3
1,356,713	+		IAI47_06515	0.54	-1.4
1,356,714	-		IAI47_06515	0.55	+0.5
1,356,714	-		IAI47_06515	0.55	+0.4
1,356,714	-		IAI47_06515	0.55	-1.7
1,356,714	-		IAI47_06515	0.55	-0.8
1,356,767	-		IAI47_06515	0.59	-0.8
1,356,767	-		IAI47_06515	0.59	-0.6
1,356,796	+		IAI47_06515	0.62	-0.3
1,356,827	+		IAI47_06515	0.65	+0.3
1,356,827	+		IAI47_06515	0.65	-0.1
1,356,827	+		IAI47_06515	0.65	+0.6
1,356,827	+		IAI47_06515	0.65	-0.3
1,356,828	-		IAI47_06515	0.65	-1.1
1,356,830	-		IAI47_06515	0.65	-0.9
1,356,830	-		IAI47_06515	0.65	+0.2
1,356,845	+		IAI47_06515	0.66	+1.1
1,356,845	+		IAI47_06515	0.66	+0.3
1,356,863	+		IAI47_06515	0.68	-0.7
1,356,878	+		IAI47_06515	0.69	-0.1
1,356,878	+		IAI47_06515	0.69	+1.4
1,356,878	+		IAI47_06515	0.69	-0.4
1,356,879	-		IAI47_06515	0.69	-0.1
1,356,879	-		IAI47_06515	0.69	-1.3
1,356,974	+		IAI47_06515	0.78	+0.4
1,356,974	+		IAI47_06515	0.78	+0.7
1,356,975	-		IAI47_06515	0.78	-1.8
1,357,010	+		IAI47_06515	0.81	+2.3
1,357,010	+		IAI47_06515	0.81	+2.4
1,357,011	-		IAI47_06515	0.81	-0.6
1,357,011	-		IAI47_06515	0.81	-1.0
1,357,070	-		IAI47_06515	0.87	+0.6
1,357,088	+		IAI47_06515	0.88	+0.2
1,357,088	+		IAI47_06515	0.88	-0.2
1,357,088	+		IAI47_06515	0.88	+1.1
1,357,088	+		IAI47_06515	0.88	+1.0
1,357,088	+		IAI47_06515	0.88	+0.2
1,357,088	+		IAI47_06515	0.88	-0.3
1,357,088	+		IAI47_06515	0.88	+0.2
1,357,088	+		IAI47_06515	0.88	-1.4
1,357,089	-		IAI47_06515	0.88	+0.2
1,357,089	-		IAI47_06515	0.88	+0.6
1,357,089	-		IAI47_06515	0.88	+0.2
1,357,091	+		IAI47_06515	0.88	+1.4
1,357,091	+		IAI47_06515	0.88	-0.0
1,357,092	-		IAI47_06515	0.88	-1.0
1,357,092	-		IAI47_06515	0.88	-1.3
1,357,111	+				-1.1
1,357,111	+				-0.8
1,357,111	+				+0.5
1,357,111	+				+0.7
1,357,111	+				-1.3
1,357,111	+				+1.3
1,357,111	+				+0.2
1,357,111	+				+0.6
1,357,111	+				+0.2
1,357,111	+				-0.5
1,357,111	+				+2.0
1,357,112	-				+1.3
1,357,112	-				+1.7
1,357,112	-				-1.4
1,357,112	-				-0.8
1,357,112	-				-1.1
1,357,112	-				+1.7
1,357,112	-				-1.6
1,357,112	-				-0.8
1,357,115	+				+1.3
1,357,115	+				+0.5
1,357,115	+				-0.3
1,357,115	+				+1.1
1,357,115	+				-0.8
1,357,115	+				+0.7
1,357,115	+				+1.2
1,357,115	+				+0.6
1,357,115	+				-1.1
1,357,115	+				+2.0
1,357,116	-				-0.6
1,357,116	-				-1.6
1,357,116	-				-0.1
1,357,116	-				-1.1
1,357,116	-				+0.3
1,357,116	-				-1.8
1,357,116	-				-0.6
1,357,116	-				-2.6
1,357,116	-				-0.3
1,357,116	-				-0.3
1,357,125	-				+0.2
1,357,178	-				+0.0
1,357,197	+				+0.4
1,357,197	+				-1.1
1,357,197	+				+2.6
1,357,197	+				+0.7
1,357,197	+				-0.6
1,357,197	+				+1.2
1,357,198	-				-0.3
1,357,198	-				-1.0
1,357,198	-				+1.0
1,357,209	-				+1.7
1,357,209	-				+2.7
1,357,217	+				-0.7
1,357,217	+				+1.2
1,357,217	+				-0.6
1,357,217	+				+0.7
1,357,217	+				-0.6
1,357,217	+				-0.8
1,357,217	+				+0.7
1,357,217	+				-0.2
1,357,218	-				+0.7
1,357,238	+				-1.6
1,357,238	+				-1.1
1,357,257	+		IAI47_06520	0.10	+0.7
1,357,257	+		IAI47_06520	0.10	-0.1
1,357,257	+		IAI47_06520	0.10	-1.8
1,357,258	-		IAI47_06520	0.11	+0.2
1,357,270	-		IAI47_06520	0.17	+0.1
1,357,270	-		IAI47_06520	0.17	+0.2
1,357,326	+		IAI47_06520	0.46	-1.1
1,357,326	+		IAI47_06520	0.46	-0.8
1,357,326	+		IAI47_06520	0.46	-1.7
1,357,326	+		IAI47_06520	0.46	-1.8
1,357,326	+		IAI47_06520	0.46	-0.8
1,357,326	+		IAI47_06520	0.46	-1.3
1,357,327	-		IAI47_06520	0.46	-1.7
1,357,327	-		IAI47_06520	0.46	-0.8
1,357,327	-		IAI47_06520	0.46	-0.5
1,357,327	-		IAI47_06520	0.46	+1.0
1,357,327	-		IAI47_06520	0.46	+0.2
1,357,327	-		IAI47_06520	0.46	-0.4
1,357,449	+				+0.7
1,357,449	+				-0.2
1,357,450	-				+2.5
1,357,487	+				+1.4
1,357,487	+				-1.5
1,357,525	+				-1.3
1,357,525	+				+0.1
1,357,525	+				-2.2
1,357,525	+				+1.7
1,357,525	+				+0.2
1,357,574	-				-2.2
1,357,637	+				-1.1
1,357,637	+				+0.1
1,357,637	+				-0.6
1,357,637	+				+0.4
1,357,637	+				+0.5
1,357,637	+				+0.7
1,357,637	+				-0.3
1,357,638	-				+0.6
1,357,638	-				+1.7
1,357,640	-				+0.5
1,357,684	+				-0.4
1,357,684	+				+0.0
1,357,684	+				-0.4
1,357,684	+				-0.7
1,357,685	-				+0.2
1,357,685	-				-1.0
1,357,685	-				-0.3
1,357,685	-				-0.3
1,357,695	+				+1.3
1,357,695	+				+2.2
1,357,695	+				+0.7
1,357,695	+				-0.5
1,357,696	-				-1.3
1,357,696	-				+0.4
1,357,696	-				+1.1
1,357,696	-				+1.5
1,357,696	-				+0.1
1,357,696	-				-1.4
1,357,703	+				+0.1
1,357,703	+				-1.1
1,357,704	-				+0.7
1,357,704	-				-1.3
1,357,704	-				+1.4
1,357,704	-				-0.0
1,357,713	-				+2.3
1,357,713	-				-2.3
1,357,713	-				-0.8
1,357,713	-				+0.2
1,357,713	-				+0.4
1,357,713	-				+0.7
1,357,713	-				-1.1
1,357,718	+				+0.2
1,357,719	-				-0.3
1,357,747	+				+1.3
1,357,747	+				+1.7
1,357,747	+				+1.6
1,357,748	-				-0.3
1,357,748	-				+0.2
1,357,783	+				-0.6
1,357,793	+				+1.7
1,357,794	-				-0.9
1,357,819	-				-0.3
1,357,841	-				+1.3