Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20695

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
4,742,334	+				+0.3
4,742,751	-				-1.1
4,742,756	-				-0.9
4,742,792	-				+0.4
4,743,383	+		HSERO_RS20695	0.11	+0.3
4,743,447	+		HSERO_RS20695	0.21	+3.8
4,743,447	+		HSERO_RS20695	0.21	+0.1
4,743,470	+		HSERO_RS20695	0.24	+1.5
4,743,536	+		HSERO_RS20695	0.34	+1.1
4,743,536	+		HSERO_RS20695	0.34	+0.1
4,743,560	+		HSERO_RS20695	0.38	+0.3
4,743,567	+		HSERO_RS20695	0.39	+1.6
4,743,603	+		HSERO_RS20695	0.44	+1.1
4,743,611	-		HSERO_RS20695	0.45	+1.0
4,743,616	+		HSERO_RS20695	0.46	+1.5
4,743,707	+		HSERO_RS20695	0.59	+0.5
4,743,746	+		HSERO_RS20695	0.65	+0.3
4,743,748	-		HSERO_RS20695	0.65	+0.6
4,743,800	-				+1.7
4,743,977	-				+0.1
4,744,024	+				+0.2
4,744,024	+				-0.1
4,744,140	+				+0.2
4,744,414	-		HSERO_RS20700	0.29	-0.1
4,744,488	-		HSERO_RS20700	0.35	+0.4
4,744,585	+		HSERO_RS20700	0.42	-0.1
4,744,848	+		HSERO_RS20700	0.62	+0.2
4,744,848	+		HSERO_RS20700	0.62	-2.0
4,744,853	+		HSERO_RS20700	0.63	-0.1
4,744,856	-		HSERO_RS20700	0.63	+0.0
4,744,856	-		HSERO_RS20700	0.63	-0.1
4,744,888	-		HSERO_RS20700	0.65	-2.2
4,744,961	-		HSERO_RS20700	0.71	+0.1