Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS19310 and HSERO_RS19315 are separated by 132 nucleotides HSERO_RS19315 and HSERO_RS19320 are separated by 114 nucleotides HSERO_RS19320 and HSERO_RS19325 are separated by 229 nucleotides
HSERO_RS19310: HSERO_RS19310 - membrane protein, at 4,429,292 to 4,429,642
_RS19310
HSERO_RS19315: HSERO_RS19315 - hypothetical protein, at 4,429,775 to 4,430,494
_RS19315
HSERO_RS19320: HSERO_RS19320 - hypothetical protein, at 4,430,609 to 4,431,397
_RS19320
HSERO_RS19325: HSERO_RS19325 - LysR family transcriptional regulator, at 4,431,627 to 4,432,601
_RS19325
Position (kb) 4430
4431
4432 Strain fitness (log2 ratio) -1
0
1 at 4429.641 kb on + strand at 4429.791 kb on - strand at 4429.974 kb on + strand, within HSERO_RS19315 at 4430.140 kb on + strand, within HSERO_RS19315 at 4430.190 kb on - strand, within HSERO_RS19315 at 4430.190 kb on - strand, within HSERO_RS19315 at 4430.309 kb on - strand, within HSERO_RS19315 at 4430.524 kb on - strand at 4430.532 kb on - strand at 4430.907 kb on - strand, within HSERO_RS19320 at 4430.924 kb on + strand, within HSERO_RS19320 at 4430.958 kb on - strand, within HSERO_RS19320 at 4430.977 kb on - strand, within HSERO_RS19320 at 4431.098 kb on - strand, within HSERO_RS19320 at 4431.135 kb on - strand, within HSERO_RS19320 at 4431.147 kb on + strand, within HSERO_RS19320 at 4431.237 kb on - strand, within HSERO_RS19320 at 4431.294 kb on - strand, within HSERO_RS19320 at 4431.295 kb on - strand, within HSERO_RS19320 at 4431.426 kb on + strand at 4431.442 kb on + strand at 4431.584 kb on + strand at 4431.901 kb on + strand, within HSERO_RS19325 at 4431.979 kb on + strand, within HSERO_RS19325 at 4432.092 kb on - strand, within HSERO_RS19325 at 4432.096 kb on + strand, within HSERO_RS19325 at 4432.263 kb on - strand, within HSERO_RS19325 at 4432.281 kb on - strand, within HSERO_RS19325 at 4432.376 kb on - strand, within HSERO_RS19325
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxy-D-Ribose 5 mM remove 4,429,641 + -0.0 4,429,791 - +0.6 4,429,974 + HSERO_RS19315 0.28 +1.3 4,430,140 + HSERO_RS19315 0.51 +0.1 4,430,190 - HSERO_RS19315 0.58 -0.4 4,430,190 - HSERO_RS19315 0.58 +0.4 4,430,309 - HSERO_RS19315 0.74 +0.1 4,430,524 - +0.1 4,430,532 - -0.5 4,430,907 - HSERO_RS19320 0.38 -0.4 4,430,924 + HSERO_RS19320 0.40 -0.6 4,430,958 - HSERO_RS19320 0.44 +0.1 4,430,977 - HSERO_RS19320 0.47 -0.3 4,431,098 - HSERO_RS19320 0.62 -0.3 4,431,135 - HSERO_RS19320 0.67 +0.9 4,431,147 + HSERO_RS19320 0.68 -0.1 4,431,237 - HSERO_RS19320 0.80 +0.5 4,431,294 - HSERO_RS19320 0.87 -0.4 4,431,295 - HSERO_RS19320 0.87 +0.7 4,431,426 + -0.4 4,431,442 + -0.3 4,431,584 + -0.8 4,431,901 + HSERO_RS19325 0.28 -0.2 4,431,979 + HSERO_RS19325 0.36 -0.0 4,432,092 - HSERO_RS19325 0.48 -0.8 4,432,096 + HSERO_RS19325 0.48 -0.2 4,432,263 - HSERO_RS19325 0.65 +0.8 4,432,281 - HSERO_RS19325 0.67 -1.3 4,432,376 - HSERO_RS19325 0.77 -0.1
Or see this region's nucleotide sequence