Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS19305 and HSERO_RS19310 are separated by 299 nucleotides HSERO_RS19310 and HSERO_RS19315 are separated by 132 nucleotides HSERO_RS19315 and HSERO_RS19320 are separated by 114 nucleotides
HSERO_RS19305: HSERO_RS19305 - hypothetical protein, at 4,428,528 to 4,428,992
_RS19305
HSERO_RS19310: HSERO_RS19310 - membrane protein, at 4,429,292 to 4,429,642
_RS19310
HSERO_RS19315: HSERO_RS19315 - hypothetical protein, at 4,429,775 to 4,430,494
_RS19315
HSERO_RS19320: HSERO_RS19320 - hypothetical protein, at 4,430,609 to 4,431,397
_RS19320
Position (kb) 4429
4430
4431 Strain fitness (log2 ratio) -1
0
1
2
3 at 4428.817 kb on - strand, within HSERO_RS19305 at 4428.864 kb on - strand, within HSERO_RS19305 at 4428.940 kb on - strand, within HSERO_RS19305 at 4429.067 kb on + strand at 4429.074 kb on + strand at 4429.246 kb on - strand at 4429.251 kb on - strand at 4429.251 kb on - strand at 4429.258 kb on - strand at 4429.261 kb on - strand at 4429.261 kb on - strand at 4429.261 kb on - strand at 4429.339 kb on + strand, within HSERO_RS19310 at 4429.441 kb on - strand, within HSERO_RS19310 at 4429.491 kb on - strand, within HSERO_RS19310 at 4429.641 kb on + strand at 4429.791 kb on - strand at 4429.974 kb on + strand, within HSERO_RS19315 at 4430.140 kb on + strand, within HSERO_RS19315 at 4430.190 kb on - strand, within HSERO_RS19315 at 4430.190 kb on - strand, within HSERO_RS19315 at 4430.309 kb on - strand, within HSERO_RS19315 at 4430.524 kb on - strand at 4430.532 kb on - strand at 4430.907 kb on - strand, within HSERO_RS19320 at 4430.924 kb on + strand, within HSERO_RS19320 at 4430.958 kb on - strand, within HSERO_RS19320 at 4430.977 kb on - strand, within HSERO_RS19320 at 4431.098 kb on - strand, within HSERO_RS19320 at 4431.135 kb on - strand, within HSERO_RS19320 at 4431.147 kb on + strand, within HSERO_RS19320 at 4431.237 kb on - strand, within HSERO_RS19320 at 4431.294 kb on - strand, within HSERO_RS19320 at 4431.295 kb on - strand, within HSERO_RS19320 at 4431.426 kb on + strand at 4431.442 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxy-D-Ribose 5 mM remove 4,428,817 - HSERO_RS19305 0.62 +0.1 4,428,864 - HSERO_RS19305 0.72 +0.4 4,428,940 - HSERO_RS19305 0.89 -0.1 4,429,067 + +2.8 4,429,074 + +0.5 4,429,246 - -0.2 4,429,251 - -0.2 4,429,251 - +2.0 4,429,258 - -0.3 4,429,261 - +1.6 4,429,261 - -0.1 4,429,261 - -0.4 4,429,339 + HSERO_RS19310 0.13 +0.9 4,429,441 - HSERO_RS19310 0.42 +1.1 4,429,491 - HSERO_RS19310 0.57 +1.0 4,429,641 + -0.0 4,429,791 - +0.6 4,429,974 + HSERO_RS19315 0.28 +1.3 4,430,140 + HSERO_RS19315 0.51 +0.1 4,430,190 - HSERO_RS19315 0.58 -0.4 4,430,190 - HSERO_RS19315 0.58 +0.4 4,430,309 - HSERO_RS19315 0.74 +0.1 4,430,524 - +0.1 4,430,532 - -0.5 4,430,907 - HSERO_RS19320 0.38 -0.4 4,430,924 + HSERO_RS19320 0.40 -0.6 4,430,958 - HSERO_RS19320 0.44 +0.1 4,430,977 - HSERO_RS19320 0.47 -0.3 4,431,098 - HSERO_RS19320 0.62 -0.3 4,431,135 - HSERO_RS19320 0.67 +0.9 4,431,147 + HSERO_RS19320 0.68 -0.1 4,431,237 - HSERO_RS19320 0.80 +0.5 4,431,294 - HSERO_RS19320 0.87 -0.4 4,431,295 - HSERO_RS19320 0.87 +0.7 4,431,426 + -0.4 4,431,442 + -0.3
Or see this region's nucleotide sequence