Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14355

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
3,252,728	-		HSERO_RS14350	0.21	+0.5
3,252,834	-		HSERO_RS14350	0.31	+0.8
3,252,834	-		HSERO_RS14350	0.31	+1.4
3,252,869	+		HSERO_RS14350	0.34	-0.2
3,253,003	+		HSERO_RS14350	0.45	-0.1
3,253,080	-		HSERO_RS14350	0.52	-0.0
3,253,284	+		HSERO_RS14350	0.70	-1.8
3,253,330	+		HSERO_RS14350	0.74	+0.2
3,253,476	+		HSERO_RS14350	0.87	-0.9
3,253,543	-				-0.9
3,253,614	+				+0.8
3,253,650	+				-0.5
3,253,677	+		HSERO_RS14355	0.11	+0.2
3,253,684	+		HSERO_RS14355	0.13	-0.1
3,253,845	-		HSERO_RS14355	0.56	-0.2
3,253,845	-		HSERO_RS14355	0.56	-0.7
3,253,975	+				+0.2
3,254,501	-		HSERO_RS14365	0.77	-0.4
3,254,668	+		HSERO_RS14370	0.11	-0.1
3,254,764	-		HSERO_RS14370	0.23	-0.5
3,254,846	+		HSERO_RS14370	0.34	+0.3