Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10100

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
2,280,420	-		HSERO_RS10090	0.39	-0.0
2,280,609	+		HSERO_RS10090	0.61	+0.1
2,280,643	-		HSERO_RS10090	0.65	-0.9
2,280,697	+		HSERO_RS10090	0.72	+0.3
2,280,706	+		HSERO_RS10090	0.73	-0.2
2,280,714	-		HSERO_RS10090	0.74	-0.2
2,280,879	-				-0.5
2,280,933	-				+0.1
2,280,933	-				+0.6
2,281,135	+		HSERO_RS10095	0.21	+0.5
2,281,198	-				-0.6
2,281,224	-		HSERO_RS10095	0.60	+0.6
2,281,355	-				-0.4
2,281,401	-				+1.1
2,281,588	+		HSERO_RS10100	0.20	+0.4
2,281,590	-		HSERO_RS10100	0.20	+2.7
2,281,631	-		HSERO_RS10100	0.24	+0.2
2,281,797	+		HSERO_RS10100	0.41	-0.8
2,281,805	-		HSERO_RS10100	0.42	-0.3
2,281,840	-		HSERO_RS10100	0.45	-0.2
2,282,013	+		HSERO_RS10100	0.63	-0.0
2,282,107	+		HSERO_RS10100	0.72	-0.3
2,282,459	+		HSERO_RS10105	0.25	-0.2
2,282,462	-		HSERO_RS10105	0.26	+0.0
2,282,649	-				-0.0
2,282,731	+				+1.0
2,282,990	+				+1.7
2,283,001	+				+0.3
2,283,096	-		HSERO_RS10110	0.11	-0.3
2,283,122	-		HSERO_RS10110	0.13	-0.0
2,283,304	-		HSERO_RS10110	0.24	+0.3